RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SAMSN1Q9NSI8 373 aaKnown RBP10.93□□□□□ -0.66
CNOT4-212ENST00000541284 EXOC5O00471 708 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 SLC5A1P13866 664 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 PLA2G4AP47712 749 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 HSP90AA4PQ58FG1 418 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 RILPL1Q5EBL4 403 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 CLEC4GQ6UXB4 293 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 ZNF654Q8IZM8 581 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 CCDC87Q9NVE4 849 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 NFE2L3Q9Y4A8 694 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 A0A1B0GTH6 734 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 ARHGAP6O43182 974 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 DEXIO95424 95 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 MAP3K12Q12852 859 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 MFSD6Q6ZSS7 791 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 FANCBQ8NB91 859 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 RIOK1Q9BRS2 568 aaKnown RBP10.93□□□□□ -0.66
CNOT4-212ENST00000541284 PHF20Q9BVI0 1012 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 ADAMTS3O15072 1205 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 TOP1P11387 765 aaKnown RBP10.92□□□□□ -0.66
CNOT4-212ENST00000541284 EVA1CP58658 441 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 EVX2Q03828 476 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 DPYDQ12882 1025 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 SLC4A4Q9Y6R1 1079 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 MYH1P12882 1939 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 A0A0U1RQJ8 604 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 FGRP09769 529 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 MAP3K9P80192 1104 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 PPARAQ07869 468 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 TRIM29Q14134 588 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 WTAPQ15007 396 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 MLKLQ8NB16 471 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 ATRIPQ8WXE1 791 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 TM4SF1P30408 202 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 CDKAL1Q5VV42 579 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 OLFM4Q6UX06 510 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 TRIML1Q8N9V2 468 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 MIGA1Q8NAN2 632 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 WASF1Q92558 559 aa10.92□□□□□ -0.66
CNOT4-212ENST00000541284 MRPL44Q9H9J2 332 aaKnown RBP10.92□□□□□ -0.66
CNOT4-212ENST00000541284 AATFQ9NY61 560 aaKnown RBP eCLIP10.92□□□□□ -0.66
CNOT4-212ENST00000541284 NPHP1O15259 732 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 PNMA6AP0CW24 399 aaPredicted RBP10.91□□□□□ -0.66
CNOT4-212ENST00000541284 GNAT2P19087 354 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 PLCD1P51178 756 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 ADKP55263 362 aaKnown RBP10.91□□□□□ -0.66
CNOT4-212ENST00000541284 MTF1Q14872 753 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 SF3B3Q15393 1217 aaKnown RBP10.91□□□□□ -0.66
CNOT4-212ENST00000541284 SPECC1LQ69YQ0 1117 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 RSRC2Q7L4I2 434 aaKnown RBP10.91□□□□□ -0.66
CNOT4-212ENST00000541284 TEX33O43247 280 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 STX10O60499 249 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 FECHP22830 423 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 CASP1P29466 404 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 GNL2Q13823 731 aaKnown RBP10.91□□□□□ -0.66
CNOT4-212ENST00000541284 ARHGAP29Q52LW3 1261 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 CCDC82Q8N4S0 544 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 ENAHQ8N8S7 591 aaPredicted RBP10.91□□□□□ -0.66
CNOT4-212ENST00000541284 SDR42E1Q8WUS8 393 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 BAG1Q99933 345 aaPredicted RBP10.91□□□□□ -0.66
CNOT4-212ENST00000541284 RNF26Q9BY78 433 aaPredicted RBP10.91□□□□□ -0.66
CNOT4-212ENST00000541284 EPC1Q9H2F5 836 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 MRFAP1Q9Y605 127 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 MYH8P13535 1937 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 TNKSO95271 1327 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 DDB1Q16531 1140 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 EPSTI1Q96J88 318 aa10.91□□□□□ -0.66
CNOT4-212ENST00000541284 PPP1R3GB7ZBB8 358 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 KCNQ2O43526 872 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 C3orf67Q6ZVT6 689 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 MTRQ99707 1265 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 CARD6Q9BX69 1037 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 CABP5Q9NP86 173 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 C10orf71Q711Q0 1435 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 CCP110O43303 1012 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 SASH3O75995 380 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 PLEKHA8P1O95397 391 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 ERCC5P28715 1186 aaPredicted RBP10.9□□□□□ -0.66
CNOT4-212ENST00000541284 TDO2P48775 406 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 CHRNDQ07001 517 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 E2F4Q16254 413 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 RRP12Q5JTH9 1297 aaKnown RBP10.9□□□□□ -0.66
CNOT4-212ENST00000541284 SMARCE1Q969G3 411 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 RAI14Q9P0K7 980 aa10.9□□□□□ -0.66
CNOT4-212ENST00000541284 TROAPQ12815 778 aa10.9□□□□□ -0.67
CNOT4-212ENST00000541284 IL17AQ16552 155 aa10.9□□□□□ -0.67
CNOT4-212ENST00000541284 RAD9BQ6WBX8 426 aa10.9□□□□□ -0.67
CNOT4-212ENST00000541284 PAGE5Q96GU1 130 aa10.9□□□□□ -0.67
CNOT4-212ENST00000541284 VPS54Q9P1Q0 977 aa10.9□□□□□ -0.67
CNOT4-212ENST00000541284 ADD3Q9UEY8 706 aaKnown RBP10.9□□□□□ -0.67
CNOT4-212ENST00000541284 CYP2D7A0A087X1C5 515 aa10.89□□□□□ -0.67
CNOT4-212ENST00000541284 EFCAB8A8MWE9 144 aa10.89□□□□□ -0.67
CNOT4-212ENST00000541284 PRDM1O75626 825 aa10.89□□□□□ -0.67
CNOT4-212ENST00000541284 PDILTQ8N807 584 aa10.89□□□□□ -0.67
CNOT4-212ENST00000541284 XDHP47989 1333 aa10.89□□□□□ -0.67
CNOT4-212ENST00000541284 HOMER1Q86YM7 354 aa10.89□□□□□ -0.67
CNOT4-212ENST00000541284 TRIM22Q8IYM9 498 aa10.89□□□□□ -0.67
CNOT4-212ENST00000541284 MPHOSPH8Q99549 860 aa10.89□□□□□ -0.67
CNOT4-212ENST00000541284 DESI2Q9BSY9 194 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms