RNA–Protein interactions for RNA: ENST00000541030.5

STRC-213, Transcript of stereocilin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STRC, Length 5,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-213ENST00000541030 CDC37L1Q7L3B6 337 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 CABP7Q86V35 215 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 JDP2Q8WYK2 163 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 LPIN2Q92539 896 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 SATB1Q01826 763 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 ZNF790Q6PG37 636 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 G2E3Q7L622 706 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 TRIML1Q8N9V2 468 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 OTUD7AQ8TE49 926 aaPredicted RBP13.79□□□□□ -0.2
STRC-213ENST00000541030 TRIM31Q9BZY9 425 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 FAN1Q9Y2M0 1017 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 ZNF500O60304 480 aaPredicted RBP13.79□□□□□ -0.2
STRC-213ENST00000541030 GCP02774 474 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 CALCRLQ16602 461 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 ANKRD20A3Q5VUR7 823 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 PNMA8AQ86V59 439 aaPredicted RBP13.79□□□□□ -0.2
STRC-213ENST00000541030 RNF10Q8N5U6 811 aaKnown RBP13.79□□□□□ -0.2
STRC-213ENST00000541030 DCUN1D2Q6PH85 259 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 EPSTI1Q96J88 318 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 PPP1R12CQ9BZL4 782 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 PTPRKQ15262 1439 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 SBNO1A3KN83 1393 aa13.79□□□□□ -0.2
STRC-213ENST00000541030 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
STRC-213ENST00000541030 GADD45BO75293 160 aaPredicted RBP13.78□□□□□ -0.2
STRC-213ENST00000541030 KRT71Q3SY84 523 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 OR8K1Q8NGG5 319 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
STRC-213ENST00000541030 KDM3AQ9Y4C1 1321 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 ZNF518AQ6AHZ1 1483 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 DAPK3O43293 454 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 EXOC3O60645 756 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 KRT15P19012 456 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 MCTP2Q6DN12 878 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 XPO4Q9C0E2 1151 aaKnown RBP13.78□□□□□ -0.2
STRC-213ENST00000541030 TMOD4Q9NZQ9 345 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 AMFRQ9UKV5 643 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 NCAPH2Q6IBW4 605 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 FAM173BQ6P4H8 233 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 PFDN4Q9NQP4 134 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 BIVM-ERCC5R4GMW8 1640 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 MAP3K19Q56UN5 1328 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 EFCAB8A8MWE9 144 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 CA8P35219 290 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 ATP2A3Q93084 1043 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 KIAA1468Q9P260 1216 aa13.78□□□□□ -0.2
STRC-213ENST00000541030 CHMP2AO43633 222 aa13.77□□□□□ -0.2
STRC-213ENST00000541030 TROVE2P10155 538 aaKnown RBP eCLIP13.77□□□□□ -0.2
STRC-213ENST00000541030 PHLDB3Q6NSJ2 640 aa13.77□□□□□ -0.2
STRC-213ENST00000541030 CDCA7Q9BWT1 371 aaPredicted RBP13.77□□□□□ -0.2
STRC-213ENST00000541030 CACYBPQ9HB71 228 aaKnown RBP13.77□□□□□ -0.2
STRC-213ENST00000541030 HOMER3Q9NSC5 361 aa13.77□□□□□ -0.2
STRC-213ENST00000541030 TCOF1Q13428 1488 aaKnown RBP13.77□□□□□ -0.2
STRC-213ENST00000541030 MROH5Q6ZUA9 1318 aa13.77□□□□□ -0.2
STRC-213ENST00000541030 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.2
STRC-213ENST00000541030 SEPT14Q6ZU15 432 aa13.77□□□□□ -0.2
STRC-213ENST00000541030 Q9H521 79 aa13.77□□□□□ -0.2
STRC-213ENST00000541030 SAP30BPQ9UHR5 308 aaKnown RBP13.77□□□□□ -0.2
STRC-213ENST00000541030 DDX41Q9UJV9 622 aaKnown RBP13.77□□□□□ -0.2
STRC-213ENST00000541030 HYOU1Q9Y4L1 999 aa13.77□□□□□ -0.2
STRC-213ENST00000541030 TTC36A6NLP5 189 aa13.77□□□□□ -0.21
STRC-213ENST00000541030 ATP5JP18859 108 aa13.77□□□□□ -0.21
STRC-213ENST00000541030 APBA1Q02410 837 aa13.77□□□□□ -0.21
STRC-213ENST00000541030 CCDC125Q86Z20 511 aa13.77□□□□□ -0.21
STRC-213ENST00000541030 IL13P35225 146 aa13.77□□□□□ -0.21
STRC-213ENST00000541030 MYSM1Q5VVJ2 828 aa13.77□□□□□ -0.21
STRC-213ENST00000541030 GRK7Q8WTQ7 553 aa13.77□□□□□ -0.21
STRC-213ENST00000541030 RNF34Q969K3 372 aa13.77□□□□□ -0.21
STRC-213ENST00000541030 MRFAP1L1Q96HT8 127 aa13.77□□□□□ -0.21
STRC-213ENST00000541030 EDC4Q6P2E9 1401 aaKnown RBP13.77□□□□□ -0.21
STRC-213ENST00000541030 RGS16O15492 202 aaPredicted RBP13.77□□□□□ -0.21
STRC-213ENST00000541030 SP4Q02446 784 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 ZSCAN26Q16670 478 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 MYCT1Q8N699 235 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 MED4Q9NPJ6 270 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 KIAA0232Q92628 1395 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 HARSP12081 509 aaKnown RBP13.76□□□□□ -0.21
STRC-213ENST00000541030 OTUD7BQ6GQQ9 843 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 RRAGAQ7L523 313 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 TMEM63CQ9P1W3 806 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 TRIM37O94972 964 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 DNM2P50570 870 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 LONRF2Q1L5Z9 754 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
STRC-213ENST00000541030 ZBTB9Q96C00 473 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 RIMBP2O15034 1052 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 TCP1P17987 556 aaKnown RBP13.76□□□□□ -0.21
STRC-213ENST00000541030 C17orf53Q8N3J3 647 aaPredicted RBP13.76□□□□□ -0.21
STRC-213ENST00000541030 HAUS4Q9H6D7 363 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 C19orf44Q9H6X5 657 aa13.76□□□□□ -0.21
STRC-213ENST00000541030 MRPL44Q9H9J2 332 aaKnown RBP13.76□□□□□ -0.21
STRC-213ENST00000541030 E7EWF7 191 aa13.75□□□□□ -0.21
STRC-213ENST00000541030 DNAJC8O75937 253 aaPredicted RBP13.75□□□□□ -0.21
STRC-213ENST00000541030 STX2P32856 288 aa13.75□□□□□ -0.21
STRC-213ENST00000541030 CTNNA1P35221 906 aaKnown RBP13.75□□□□□ -0.21
STRC-213ENST00000541030 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms