RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PCDH11XQ9BZA7 1347 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 PCDH11YQ9BZA8 1340 aa11.79□□□□□ -0.52
CDC42SE1-207ENST00000540998 COL18A1P39060 1754 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 NMT2O60551 498 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 SRGAP2O75044 1071 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 PPFIBP1Q86W92 1011 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 GSPT2Q8IYD1 628 aaKnown RBP11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 TRIM22Q8IYM9 498 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 ZNF654Q8IZM8 581 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 MLKLQ8NB16 471 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 PAGE5Q96GU1 130 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 SLC4A9Q96Q91 983 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 CHP1Q99653 195 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 FAN1Q9Y2M0 1017 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 PATL2C9JE40 543 aaKnown RBP11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 PES1O00541 588 aaKnown RBP11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 UBE3CQ15386 1083 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 RABGGTAQ92696 567 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 ABCF2Q9UG63 623 aa11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE1-207ENST00000540998 FCHSD1Q86WN1 690 aa11.77□□□□□ -0.52
CDC42SE1-207ENST00000540998 ADD3Q9UEY8 706 aaKnown RBP11.77□□□□□ -0.52
CDC42SE1-207ENST00000540998 ALS2Q96Q42 1657 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 TMEM94Q12767 1356 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 SPATA31A3Q5VYP0 1347 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 TRIM49BA6NDI0 452 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 MFAP3LO75121 409 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 CUL4BQ13620 913 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 SRGAP1Q7Z6B7 1085 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 FANCBQ8NB91 859 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 FEZ2Q9UHY8 353 aaPredicted RBP11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 MTMR7Q9Y216 660 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 SRPRBQ9Y5M8 271 aaKnown RBP11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 BEND6Q5SZJ8 279 aaPredicted RBP11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 RIN2Q8WYP3 895 aaPredicted RBP11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 MTRQ99707 1265 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 RABEP2Q9H5N1 569 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 GDAQ9Y2T3 454 aa11.77□□□□□ -0.53
CDC42SE1-207ENST00000540998 SPEF2Q9C093 1822 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 TNKSO95271 1327 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 WDR19Q8NEZ3 1342 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 TULP2O00295 520 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 KIF5CO60282 957 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 RILPL1Q5EBL4 403 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 NT5DC1Q5TFE4 455 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 CAPZA3Q96KX2 299 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 GUCA1BQ9UMX6 200 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 LIFRP42702 1097 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 KRT31Q15323 416 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 GIGYF2Q6Y7W6 1299 aaKnown RBP11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 CCDC102AQ96A19 550 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 JAG2Q9Y219 1238 aa11.76□□□□□ -0.53
CDC42SE1-207ENST00000540998 XDHP47989 1333 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 MAP3K15Q6ZN16 1313 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 N4BP3O15049 544 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 DYNLL1P63167 89 aaKnown RBP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 PKN1Q16512 942 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 FKBP15Q5T1M5 1219 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 JAKMIP3Q5VZ66 844 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 RRAGBQ5VZM2 374 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 NUP88Q99567 741 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 UBAC1Q9BSL1 405 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 HOOK1Q9UJC3 728 aaKnown RBP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 CDC23Q9UJX2 597 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 SOS2Q07890 1332 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 TRIM75PA6NK02 468 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 LRRIQ3A6PVS8 624 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 PP2D1A8MPX8 630 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 ERVV-2B6SEH9 535 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 NKRFO15226 690 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 IL2RBP14784 551 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 ERCC3P19447 782 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 TTF1Q15361 905 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 SPATA1Q5VX52 437 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 LRP2BPQ9P2M1 347 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 DEXIO95424 95 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 TUBB4AP04350 444 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 MCM7P33993 719 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 AKAP17AQ02040 695 aaKnown RBP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 PTGDRQ13258 359 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 KCTD19Q17RG1 926 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 FOXP1Q9H334 677 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 MST1RQ04912 1400 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 MYH2Q9UKX2 1941 aa11.75□□□□□ -0.53
CDC42SE1-207ENST00000540998 WDR17Q8IZU2 1322 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 ERICH2A1L162 156 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 ARID4AP29374 1257 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 PBX1P40424 430 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 ARHGAP25P42331 645 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 MAP3K12Q12852 859 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 IL17AQ16552 155 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 SPATA20Q8TB22 786 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 REXO2Q9Y3B8 237 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 ABCC12Q96J65 1359 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 CCDC151A5D8V7 595 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms