RNA–Protein interactions for RNA: ENST00000540898.1

FOXO3-203, Transcript of forkhead box O3, humanhuman

TSL 1 (best) BASIC

Gene FOXO3, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXO3-203ENST00000540898 SNED1Q8TER0 1413 aa11.83□□□□□ -0.52
FOXO3-203ENST00000540898 BAG6P46379 1132 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 MYSM1Q5VVJ2 828 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 APOBEC3HQ6NTF7 200 aaKnown RBP11.82□□□□□ -0.52
FOXO3-203ENST00000540898 IQCA1Q86XH1 822 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 BICD2Q8TD16 824 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 MYH1P12882 1939 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 ATP2B1P20020 1258 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 CDK8P49336 464 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 CDC42EP5Q6NZY7 148 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 NOL10Q9BSC4 688 aaKnown RBP11.82□□□□□ -0.52
FOXO3-203ENST00000540898 SCAND2PQ9GZW5 306 aaPredicted RBP11.82□□□□□ -0.52
FOXO3-203ENST00000540898 ZNF277Q9NRM2 450 aaPredicted RBP11.82□□□□□ -0.52
FOXO3-203ENST00000540898 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
FOXO3-203ENST00000540898 STX8Q9UNK0 236 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 ELP1O95163 1332 aa11.82□□□□□ -0.52
FOXO3-203ENST00000540898 ZBTB22O15209 634 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 IGSF3O75054 1194 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 LDHCP07864 332 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 PDE4BQ07343 736 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
FOXO3-203ENST00000540898 CCDC183Q5T5S1 534 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 STYK1Q6J9G0 422 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 TMC4Q7Z404 712 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 USP40Q9NVE5 1235 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 PCDHA7Q9UN72 937 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 MYH6P13533 1939 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 A0A1B0GVL5 298 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 ME1P48163 572 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 DNTTIP2Q5QJE6 756 aaKnown RBP11.81□□□□□ -0.52
FOXO3-203ENST00000540898 DACT2Q5SW24 774 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 CATIPQ7Z7H3 387 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 PLCD3Q8N3E9 789 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 TBC1D22AQ8WUA7 517 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
FOXO3-203ENST00000540898 RCOR1Q9UKL0 485 aa11.81□□□□□ -0.52
FOXO3-203ENST00000540898 GOLGA6L4A6NEF3 574 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 TOB1P50616 345 aaPredicted RBP11.8□□□□□ -0.52
FOXO3-203ENST00000540898 GRIN1Q05586 938 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 SPECC1Q5M775 1068 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 CLIC6Q96NY7 704 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
FOXO3-203ENST00000540898 KIF3AQ9Y496 699 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 RAD17O75943 681 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 CRKP46108 304 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
FOXO3-203ENST00000540898 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
FOXO3-203ENST00000540898 CCAR1Q8IX12 1150 aaKnown RBP11.8□□□□□ -0.52
FOXO3-203ENST00000540898 DIS3L2Q8IYB7 885 aaKnown RBP11.8□□□□□ -0.52
FOXO3-203ENST00000540898 LINC00301Q8NCQ3 95 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 GPKOWQ92917 476 aaPredicted RBP eCLIP11.8□□□□□ -0.52
FOXO3-203ENST00000540898 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
FOXO3-203ENST00000540898 ZNF646O15015 1829 aaPredicted RBP11.8□□□□□ -0.52
FOXO3-203ENST00000540898 NID2Q14112 1375 aa11.8□□□□□ -0.52
FOXO3-203ENST00000540898 PPIP5K2O43314 1243 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 CDKL5O76039 1030 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 GTF2F1P35269 517 aaKnown RBP eCLIP11.79□□□□□ -0.52
FOXO3-203ENST00000540898 KIAA2012Q0VF49 1180 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 CPLX2Q6PUV4 134 aaKnown RBP11.79□□□□□ -0.52
FOXO3-203ENST00000540898 TMTC3Q6ZXV5 915 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 EYA3Q99504 573 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 CGNQ9P2M7 1197 aaKnown RBP11.79□□□□□ -0.52
FOXO3-203ENST00000540898 CNTNAP5Q8WYK1 1306 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 SHTN1A0MZ66 631 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 AKR1B1P15121 316 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 SNW1Q13573 536 aaKnown RBP11.79□□□□□ -0.52
FOXO3-203ENST00000540898 TAF3Q5VWG9 929 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 PRIMPOLQ96LW4 560 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 FUCA2Q9BTY2 467 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
FOXO3-203ENST00000540898 TSPY26PQ9H489 355 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 ROBO3Q96MS0 1386 aa11.79□□□□□ -0.52
FOXO3-203ENST00000540898 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
FOXO3-203ENST00000540898 CYTH3O43739 400 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 MMP1P03956 469 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
FOXO3-203ENST00000540898 STK38Q15208 465 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 NPY5RQ15761 445 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 C16orf86Q6ZW13 317 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 C10orf71Q711Q0 1435 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 ZNF444Q8N0Y2 327 aaPredicted RBP11.78□□□□□ -0.52
FOXO3-203ENST00000540898 CNKSR1Q969H4 720 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 DNAJC18Q9H819 358 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 CFAP45Q9UL16 551 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 DDTLA6NHG4 134 aaPredicted RBP11.78□□□□□ -0.52
FOXO3-203ENST00000540898 SLC3A2P08195 630 aaKnown RBP11.78□□□□□ -0.52
FOXO3-203ENST00000540898 NDUFA8P51970 172 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 R3HDM1Q15032 1099 aaKnown RBP11.78□□□□□ -0.52
FOXO3-203ENST00000540898 ANO1Q5XXA6 986 aa11.78□□□□□ -0.52
FOXO3-203ENST00000540898 USP17L2Q6R6M4 530 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms