RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SIAH1Q8IUQ4 282 aa20.19■□□□□ 0.82
CD9-209ENST00000540891 STK11IPQ8N1F8 1099 aa20.19■□□□□ 0.82
CD9-209ENST00000540891 C12orf42Q96LP6 360 aa20.19■□□□□ 0.82
CD9-209ENST00000540891 CCDC17Q96LX7 622 aa20.19■□□□□ 0.82
CD9-209ENST00000540891 NACAP1Q9BZK3 213 aa20.19■□□□□ 0.82
CD9-209ENST00000540891 ARHGAP39Q9C0H5 1083 aa20.19■□□□□ 0.82
CD9-209ENST00000540891 TMOD4Q9NZQ9 345 aa20.19■□□□□ 0.82
CD9-209ENST00000540891 TRIM17Q9Y577 477 aa20.19■□□□□ 0.82
CD9-209ENST00000540891 ZSWIM8A7E2V4 1837 aa20.18■□□□□ 0.82
CD9-209ENST00000540891 MYH8P13535 1937 aa20.18■□□□□ 0.82
CD9-209ENST00000540891 CTGFP29279 349 aa20.18■□□□□ 0.82
CD9-209ENST00000540891 LACTBP83111 547 aaPredicted RBP20.18■□□□□ 0.82
CD9-209ENST00000540891 USP17L2Q6R6M4 530 aa20.18■□□□□ 0.82
CD9-209ENST00000540891 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.18■□□□□ 0.82
CD9-209ENST00000540891 KIAA1683Q9H0B3 1180 aa20.18■□□□□ 0.82
CD9-209ENST00000540891 NAPBQ9H115 298 aa20.18■□□□□ 0.82
CD9-209ENST00000540891 RASA1P20936 1047 aa20.17■□□□□ 0.82
CD9-209ENST00000540891 HOXA7P31268 230 aaPredicted RBP20.17■□□□□ 0.82
CD9-209ENST00000540891 ZYXQ15942 572 aaKnown RBP20.17■□□□□ 0.82
CD9-209ENST00000540891 PKN2Q16513 984 aaKnown RBP20.17■□□□□ 0.82
CD9-209ENST00000540891 FEZ1Q99689 392 aa20.17■□□□□ 0.82
CD9-209ENST00000540891 ASCC2Q9H1I8 757 aaPredicted RBP20.17■□□□□ 0.82
CD9-209ENST00000540891 PNMA3Q9UL41 463 aa20.17■□□□□ 0.82
CD9-209ENST00000540891 PPARAQ07869 468 aa20.16■□□□□ 0.82
CD9-209ENST00000540891 PABPC4Q13310 644 aaKnown RBP eCLIP20.16■□□□□ 0.82
CD9-209ENST00000540891 FBXO46Q6PJ61 603 aaPredicted RBP20.16■□□□□ 0.82
CD9-209ENST00000540891 SMCR8Q8TEV9 937 aaPredicted RBP20.16■□□□□ 0.82
CD9-209ENST00000540891 EFCC1Q9HA90 598 aa20.16■□□□□ 0.82
CD9-209ENST00000540891 CCDC171Q6TFL3 1326 aa20.16■□□□□ 0.82
CD9-209ENST00000540891 GREB1LQ9C091 1923 aaPredicted RBP20.15■□□□□ 0.82
CD9-209ENST00000540891 HSPD1P10809 573 aaKnown RBP20.15■□□□□ 0.82
CD9-209ENST00000540891 OSBPP22059 807 aa20.15■□□□□ 0.82
CD9-209ENST00000540891 USP14P54578 494 aa20.15■□□□□ 0.82
CD9-209ENST00000540891 ICA1Q05084 483 aa20.15■□□□□ 0.82
CD9-209ENST00000540891 ALX1Q15699 326 aa20.15■□□□□ 0.82
CD9-209ENST00000540891 PRDM1O75626 825 aa20.14■□□□□ 0.81
CD9-209ENST00000540891 CAPN15O75808 1086 aa20.14■□□□□ 0.81
CD9-209ENST00000540891 ECM2O94769 699 aaPredicted RBP20.14■□□□□ 0.81
CD9-209ENST00000540891 VCAM1P19320 739 aa20.14■□□□□ 0.81
CD9-209ENST00000540891 KIAA1755Q5JYT7 1200 aa20.14■□□□□ 0.81
CD9-209ENST00000540891 CWC27Q6UX04 472 aaKnown RBP20.14■□□□□ 0.81
CD9-209ENST00000540891 CENPQQ7L2Z9 268 aaPredicted RBP20.14■□□□□ 0.81
CD9-209ENST00000540891 P2RX7Q99572 595 aaKnown RBP20.14■□□□□ 0.81
CD9-209ENST00000540891 MKNK2Q9HBH9 465 aa20.14■□□□□ 0.81
CD9-209ENST00000540891 HPS5Q9UPZ3 1129 aa20.14■□□□□ 0.81
CD9-209ENST00000540891 TACC3Q9Y6A5 838 aa20.14■□□□□ 0.81
CD9-209ENST00000540891 FGAP02671 866 aa20.13■□□□□ 0.81
CD9-209ENST00000540891 POTEEQ6S8J3 1075 aa20.13■□□□□ 0.81
CD9-209ENST00000540891 SKAP1Q86WV1 359 aa20.13■□□□□ 0.81
CD9-209ENST00000540891 ANKRD13CQ8N6S4 541 aa20.13■□□□□ 0.81
CD9-209ENST00000540891 TRIM47Q96LD4 638 aa20.13■□□□□ 0.81
CD9-209ENST00000540891 IL25Q9H293 177 aa20.13■□□□□ 0.81
CD9-209ENST00000540891 DIAPH3Q9NSV4 1193 aa20.13■□□□□ 0.81
CD9-209ENST00000540891 PTPN22Q9Y2R2 807 aa20.13■□□□□ 0.81
CD9-209ENST00000540891 TMX2Q9Y320 296 aa20.13■□□□□ 0.81
CD9-209ENST00000540891 IGKV6D-41A0A0C4DH26 115 aa20.12■□□□□ 0.81
CD9-209ENST00000540891 HIP1O00291 1037 aa20.12■□□□□ 0.81
CD9-209ENST00000540891 EEF2P13639 858 aaKnown RBP20.12■□□□□ 0.81
CD9-209ENST00000540891 PSMC4P43686 418 aa20.12■□□□□ 0.81
CD9-209ENST00000540891 IRX3P78415 501 aaPredicted RBP20.12■□□□□ 0.81
CD9-209ENST00000540891 CTDSPL2Q05D32 466 aa20.12■□□□□ 0.81
CD9-209ENST00000540891 FAM110CQ1W6H9 321 aa20.12■□□□□ 0.81
CD9-209ENST00000540891 KANSL2Q9H9L4 492 aa20.12■□□□□ 0.81
CD9-209ENST00000540891 ANAPC4Q9UJX5 808 aa20.12■□□□□ 0.81
CD9-209ENST00000540891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.12■□□□□ 0.81
CD9-209ENST00000540891 HTTP42858 3142 aa20.11■□□□□ 0.81
CD9-209ENST00000540891 ZMYM6O95789 1325 aa20.11■□□□□ 0.81
CD9-209ENST00000540891 PEX10O60683 326 aa20.11■□□□□ 0.81
CD9-209ENST00000540891 GCLCP48506 637 aaPredicted RBP20.11■□□□□ 0.81
CD9-209ENST00000540891 HERVK_113P62684 666 aa20.11■□□□□ 0.81
CD9-209ENST00000540891 KIF22Q14807 665 aa20.11■□□□□ 0.81
CD9-209ENST00000540891 CATSPERGQ6ZRH7 1159 aa20.11■□□□□ 0.81
CD9-209ENST00000540891 ARHGEF10LQ9HCE6 1279 aa20.11■□□□□ 0.81
CD9-209ENST00000540891 INCENPQ9NQS7 918 aa20.11■□□□□ 0.81
CD9-209ENST00000540891 USP17L15C9J2P7 530 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 USP17L13C9JLJ4 530 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 USP17L11C9JVI0 530 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 USP17L18D6R9N7 530 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 USP17L22D6RA61 530 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 USP17L17D6RBQ6 530 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 USP17L19D6RCP7 530 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 USP17L20D6RJB6 530 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 PDE4BQ07343 736 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 USP17L24Q0WX57 530 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 ARHGEF6Q15052 776 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 ZNF444Q8N0Y2 327 aaPredicted RBP20.1■□□□□ 0.81
CD9-209ENST00000540891 RPAP3Q9H6T3 665 aaPredicted RBP20.1■□□□□ 0.81
CD9-209ENST00000540891 VCPKMTQ9H867 229 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 ZNF287Q9HBT7 754 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 TXNRD2Q9NNW7 524 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 MORF4L1Q9UBU8 362 aa20.1■□□□□ 0.81
CD9-209ENST00000540891 PLIN4Q96Q06 1357 aa20.09■□□□□ 0.81
CD9-209ENST00000540891 CCDC85CA6NKD9 419 aa20.09■□□□□ 0.81
CD9-209ENST00000540891 GNRH1P01148 92 aa20.09■□□□□ 0.81
CD9-209ENST00000540891 SLC3A2P08195 630 aaKnown RBP20.09■□□□□ 0.81
CD9-209ENST00000540891 FGRP09769 529 aa20.09■□□□□ 0.81
CD9-209ENST00000540891 MFAP1P55081 439 aaKnown RBP20.09■□□□□ 0.81
CD9-209ENST00000540891 NEDD1Q8NHV4 660 aa20.09■□□□□ 0.81
CD9-209ENST00000540891 NBPF3Q9H094 633 aa20.09■□□□□ 0.81
CD9-209ENST00000540891 RBPJLQ9UBG7 517 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms