RNA–Protein interactions for RNA: ENST00000540801.5

SSH2-204, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH2, Length 4,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-204ENST00000540801 CCDC192P0DO97 292 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 FXR1P51114 621 aaKnown RBP eCLIP7.18□□□□□ -1.26
SSH2-204ENST00000540801 MORC3Q14149 939 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 AKNAD1Q5T1N1 836 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 TRIM44Q96DX7 344 aaPredicted RBP7.18□□□□□ -1.26
SSH2-204ENST00000540801 ALG1Q9BT22 464 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 DNAJC18Q9H819 358 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 L2HGDHQ9H9P8 463 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 CCDC87Q9NVE4 849 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 ANAPC4Q9UJX5 808 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 ZNF263O14978 683 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 IFNAR1P17181 557 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 LIFRP42702 1097 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 KIAA2012Q0VF49 1180 aa7.18□□□□□ -1.26
SSH2-204ENST00000540801 ARHGEF1Q92888 912 aaKnown RBP7.18□□□□□ -1.26
SSH2-204ENST00000540801 RRP9O43818 475 aaKnown RBP7.17□□□□□ -1.26
SSH2-204ENST00000540801 ME1P48163 572 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 ADKP55263 362 aaKnown RBP7.17□□□□□ -1.26
SSH2-204ENST00000540801 ERVK-24P63145 666 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 SIAH1Q8IUQ4 282 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 ZSCAN16Q9H4T2 348 aaPredicted RBP7.17□□□□□ -1.26
SSH2-204ENST00000540801 DDX4Q9NQI0 724 aaKnown RBP7.17□□□□□ -1.26
SSH2-204ENST00000540801 MAD2L2Q9UI95 211 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 NIP7Q9Y221 180 aaKnown RBP eCLIP7.17□□□□□ -1.26
SSH2-204ENST00000540801 WDR19Q8NEZ3 1342 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 HSP90B1P14625 803 aaKnown RBP7.17□□□□□ -1.26
SSH2-204ENST00000540801 PTPREP23469 700 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 CDC25BP30305 580 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 DDR1Q08345 913 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 WDR59Q6PJI9 974 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 FILIP1Q7Z7B0 1213 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 DESI2Q9BSY9 194 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 CHD9Q3L8U1 2897 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 RHBDL3P58872 404 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 PPARAQ07869 468 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 SF3B3Q15393 1217 aaKnown RBP7.17□□□□□ -1.26
SSH2-204ENST00000540801 NCOA7Q8NI08 942 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 MRPS27Q92552 414 aaKnown RBP7.17□□□□□ -1.26
SSH2-204ENST00000540801 GPATCH3Q96I76 525 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 COL11A1P12107 1806 aaPredicted RBP7.17□□□□□ -1.26
SSH2-204ENST00000540801 TRIM49BA6NDI0 452 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 SLFN14P0C7P3 912 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 CBX1P83916 185 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 ANKRD1Q15327 319 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 KCNK18Q7Z418 384 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 NOSTRINQ8IVI9 506 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 FAM184AQ8NB25 1140 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 BICD2Q8TD16 824 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 SH3RF3Q8TEJ3 882 aaPredicted RBP7.17□□□□□ -1.26
SSH2-204ENST00000540801 GPKOWQ92917 476 aaPredicted RBP eCLIP7.17□□□□□ -1.26
SSH2-204ENST00000540801 PDCL3Q9H2J4 239 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 LRRC4CQ9HCJ2 640 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 SALL4Q9UJQ4 1053 aa7.17□□□□□ -1.26
SSH2-204ENST00000540801 ZBTB22O15209 634 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 ZRANB2O95218 330 aaKnown RBP eCLIP7.16□□□□□ -1.26
SSH2-204ENST00000540801 HSP90AA2PQ14568 343 aaPredicted RBP7.16□□□□□ -1.26
SSH2-204ENST00000540801 NR1I3Q14994 352 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 DIS3L2Q8IYB7 885 aaKnown RBP7.16□□□□□ -1.26
SSH2-204ENST00000540801 C8orf76Q96K31 380 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 BPIFA3Q9BQP9 254 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 SLC26A6Q9BXS9 759 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 DDX19AQ9NUU7 478 aaKnown RBP7.16□□□□□ -1.26
SSH2-204ENST00000540801 POLLQ9UGP5 575 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 BRCA1P38398 1863 aaKnown RBP7.16□□□□□ -1.26
SSH2-204ENST00000540801 USP17L12C9JPN9 530 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 USP17L21D6R901 530 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 POLR2DO15514 142 aaKnown RBP7.16□□□□□ -1.26
SSH2-204ENST00000540801 GYPCP04921 128 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 H2AFXP16104 143 aaPredicted RBP7.16□□□□□ -1.26
SSH2-204ENST00000540801 ARHGAP25P42331 645 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 PLA2G4AP47712 749 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 KRT32Q14532 448 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 ERCC6LQ2NKX8 1250 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 CDKAL1Q5VV42 579 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 KRBA2Q6ZNG9 492 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 BICDL1Q6ZP65 573 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 ZNF654Q8IZM8 581 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 FANCBQ8NB91 859 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 ZCCHC17Q9NP64 241 aaKnown RBP7.16□□□□□ -1.26
SSH2-204ENST00000540801 AATFQ9NY61 560 aaKnown RBP eCLIP7.16□□□□□ -1.26
SSH2-204ENST00000540801 DUSP10Q9Y6W6 482 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 WDFY4Q6ZS81 3184 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 SOWAHDA6NJG2 315 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 NOVP48745 357 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 EVA1CP58658 441 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 CDAN1Q8IWY9 1227 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.16□□□□□ -1.26
SSH2-204ENST00000540801 FBXO3Q9UK99 471 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 WDR87Q6ZQQ6 2873 aa7.16□□□□□ -1.26
SSH2-204ENST00000540801 ANKRD18BA2A2Z9 1011 aa7.15□□□□□ -1.26
SSH2-204ENST00000540801 YEATS4O95619 227 aa7.15□□□□□ -1.26
SSH2-204ENST00000540801 SKILP12757 684 aa7.15□□□□□ -1.26
SSH2-204ENST00000540801 METAP2P50579 478 aaKnown RBP eCLIP7.15□□□□□ -1.26
SSH2-204ENST00000540801 PIP4K2BP78356 416 aa7.15□□□□□ -1.26
SSH2-204ENST00000540801 PPP4R3BQ5MIZ7 849 aa7.15□□□□□ -1.26
SSH2-204ENST00000540801 DNAAF5Q86Y56 855 aa7.15□□□□□ -1.26
SSH2-204ENST00000540801 GPIHBP1Q8IV16 184 aa7.15□□□□□ -1.26
SSH2-204ENST00000540801 PDILTQ8N807 584 aa7.15□□□□□ -1.26
SSH2-204ENST00000540801 CNNM1Q9NRU3 951 aa7.15□□□□□ -1.26
SSH2-204ENST00000540801 SLC4A4Q9Y6R1 1079 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms