RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
ATL3-204ENST00000540699 SHROOM1Q2M3G4 852 aaPredicted RBP12.53□□□□□ -0.4
ATL3-204ENST00000540699 ADCK5Q3MIX3 580 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 CERKLQ49MI3 558 aaPredicted RBP12.53□□□□□ -0.4
ATL3-204ENST00000540699 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 MS4A4AQ96JQ5 239 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 CCDC17Q96LX7 622 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 TTC14Q96N46 770 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 WDR18Q9BV38 432 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
ATL3-204ENST00000540699 AFG3L2Q9Y4W6 797 aa12.53□□□□□ -0.4
ATL3-204ENST00000540699 MANSC4A6NHS7 340 aaPredicted RBP12.52□□□□□ -0.41
ATL3-204ENST00000540699 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.41
ATL3-204ENST00000540699 CXCL11O14625 94 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 IRF6O14896 467 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 ST18O60284 1047 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 GDF11O95390 407 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 TBC1D8O95759 1140 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.41
ATL3-204ENST00000540699 RASA1P20936 1047 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 GUCY1A2P33402 732 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 SREBF2Q12772 1141 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 PRPF38BQ5VTL8 546 aaKnown RBP12.52□□□□□ -0.41
ATL3-204ENST00000540699 ZNF296Q8WUU4 475 aaPredicted RBP12.52□□□□□ -0.41
ATL3-204ENST00000540699 OTUD5Q96G74 571 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 NBPF3Q9H094 633 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
ATL3-204ENST00000540699 MKI67P46013 3256 aaKnown RBP12.51□□□□□ -0.41
ATL3-204ENST00000540699 USP17L5A8MUK1 530 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 ORC4O43929 436 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 GH2P01242 217 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
ATL3-204ENST00000540699 PCP11498 1178 aaKnown RBP12.51□□□□□ -0.41
ATL3-204ENST00000540699 NEK4P51957 841 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 INHBEP58166 350 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 PKN2Q16513 984 aaKnown RBP12.51□□□□□ -0.41
ATL3-204ENST00000540699 ABCB5Q2M3G0 1257 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 NOM1Q5C9Z4 860 aaKnown RBP12.51□□□□□ -0.41
ATL3-204ENST00000540699 JAKMIP1Q96N16 626 aaKnown RBP12.51□□□□□ -0.41
ATL3-204ENST00000540699 CFHR5Q9BXR6 569 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 UPF3BQ9BZI7 483 aaKnown RBP12.51□□□□□ -0.41
ATL3-204ENST00000540699 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
ATL3-204ENST00000540699 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
ATL3-204ENST00000540699 CTNNA3Q9UI47 895 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 TACC3Q9Y6A5 838 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 ZHX2Q9Y6X8 837 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 PLIN4Q96Q06 1357 aa12.51□□□□□ -0.41
ATL3-204ENST00000540699 BRCA2P51587 3418 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 AKR1B1P15121 316 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 NT5C2P49902 561 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 GTF2A2P52657 109 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 PDE4BQ07343 736 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 SNAPC2Q13487 334 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 MOGSQ13724 837 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 COL9A3Q14050 684 aaPredicted RBP12.5□□□□□ -0.41
ATL3-204ENST00000540699 KRT32Q14532 448 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 STOX1Q6ZVD7 989 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 TMEM179Q6ZVK1 233 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATL3-204ENST00000540699 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
ATL3-204ENST00000540699 IGKV6D-41A0A0C4DH26 115 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 A0A0G2JLL6 359 aaPredicted RBP12.49□□□□□ -0.41
ATL3-204ENST00000540699 GPR25O00155 361 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 ZNF213O14771 459 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 CETPP11597 493 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
ATL3-204ENST00000540699 PSMA5P28066 241 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 MCM2P49736 904 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 RUFY3Q7L099 469 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 PRRT2Q7Z6L0 340 aaPredicted RBP12.49□□□□□ -0.41
ATL3-204ENST00000540699 CCDC84Q86UT8 332 aaPredicted RBP12.49□□□□□ -0.41
ATL3-204ENST00000540699 TBC1D10CQ8IV04 446 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 BRI3BPQ8WY22 251 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 MKNK2Q9HBH9 465 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 AS3MTQ9HBK9 375 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 ZCCHC17Q9NP64 241 aaKnown RBP12.49□□□□□ -0.41
ATL3-204ENST00000540699 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
ATL3-204ENST00000540699 PARP14Q460N5 1801 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 CPA1P15085 419 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 RPS6KB1P23443 525 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 BACE1P56817 501 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 HAND2P61296 217 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 SPP2Q13103 211 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 SEPT2Q15019 361 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 IMMTQ16891 758 aaKnown RBP12.48□□□□□ -0.41
ATL3-204ENST00000540699 AKNAD1Q5T1N1 836 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 SIAH1Q8IUQ4 282 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 ZNF444Q8N0Y2 327 aaPredicted RBP12.48□□□□□ -0.41
ATL3-204ENST00000540699 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 PTPN18Q99952 460 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
ATL3-204ENST00000540699 R3HDMLQ9H3Y0 253 aa12.48□□□□□ -0.41
ATL3-204ENST00000540699 DAXXQ9UER7 740 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms