RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 PNMA6EA0A0J9YXQ4 647 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 GOLGA6CA6NDK9 693 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 TFRCP02786 760 aaKnown RBP10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 GOLGA6DP0CG33 693 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 PDHBP11177 359 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 GGCXP38435 758 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 UBASH3AP57075 661 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 SLC5A9Q2M3M2 681 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 ARMC3Q5W041 872 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 RCSD1Q6JBY9 416 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 PRPF40BQ6NWY9 871 aaKnown RBP10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 VSTM4Q8IW00 320 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 SUCLG2Q96I99 432 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 DESI2Q9BSY9 194 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 ATP6V0A4Q9HBG4 840 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 GOLGA6AQ9NYA3 693 aa10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 SRP68Q9UHB9 627 aaKnown RBP10.71□□□□□ -0.7
CTNNA1-243ENST00000540387 UTYO14607 1347 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 AOX1Q06278 1338 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 TOP1P11387 765 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 SLC8A3P57103 927 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 CCT2P78371 535 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 TRIM28Q13263 835 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 TRAPPC3LQ5T215 181 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 WDR93Q6P2C0 686 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 FSIP1Q8NA03 581 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 KLHL23Q8NBE8 558 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 SDF4Q9BRK5 362 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 VCPKMTQ9H867 229 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 MRPL44Q9H9J2 332 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 RCOR1Q9UKL0 485 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 H7C1W4 665 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 LY75O60449 1722 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 ATP8B2P98198 1209 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 STIM1Q13586 685 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 EZH2Q15910 746 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 SNCBQ16143 134 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 EPHA10Q5JZY3 1008 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 USPL1Q5W0Q7 1092 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 NLRP10Q86W26 655 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 FAM228AQ86W67 206 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 MAB21L3Q8N8X9 362 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 SAAL1Q96ER3 474 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 FTOQ9C0B1 505 aaKnown RBP eCLIP10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 HSD3B7Q9H2F3 369 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 SLC40A1Q9NP59 571 aa10.7□□□□□ -0.7
CTNNA1-243ENST00000540387 ZNF831Q5JPB2 1677 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 TMEM232C9JQI7 657 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 NDUFAB1O14561 156 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 RPSAP08865 295 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 GBP2P32456 591 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 ADD1P35611 737 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 PDE6BP35913 854 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 RAB27AP51159 221 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 CASP7P55210 303 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 PTH1RQ03431 593 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 CFAP100Q494V2 611 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 PPP1R42Q7Z4L9 355 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 DEFB132Q7Z7B7 95 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 ZNF34Q8IZ26 560 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 SYNE4Q8N205 404 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 NOA1Q8NC60 698 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 SPDYE1Q8NFV5 336 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 FAM89AQ96GI7 184 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 KIAA1468Q9P260 1216 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 NARFQ9UHQ1 456 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 CICQ96RK0 1608 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 UBN2Q6ZU65 1347 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 CTAGE15A4D2H0 777 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 ENO4A6NNW6 628 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 AGPSO00116 658 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 BIN1O00499 593 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 CBFA2T2O43439 604 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 STX10O60499 249 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 RAB11FIP3O75154 756 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 SERPINC1P01008 464 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 CTAGE8P0CG41 777 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 CDR1P51861 262 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 KCNB1Q14721 858 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 E2F5Q15329 346 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 PDCD2Q16342 344 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 CTAGE6Q86UF2 777 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 SPATS2Q86XZ4 545 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 CTAGE4Q8IX94 777 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 LMBR1Q8WVP7 490 aa10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 COL5A3P25940 1745 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-243ENST00000540387 PPP1R12BO60237 982 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 PFKFB2O60825 505 aa10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 ZPR1O75312 459 aa10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 RFC4P35249 363 aa10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 TUBB2AQ13885 445 aa10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 COL9A3Q14050 684 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 PLCB4Q15147 1175 aa10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 TRIM74Q86UV6 250 aa10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 TRIM73Q86UV7 250 aa10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 CCDC13Q8IYE1 715 aa10.68□□□□□ -0.7
CTNNA1-243ENST00000540387 DRAXINQ8NBI3 349 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms