RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 ATP6V1AP38606 617 aa11.66□□□□□ -0.54
GPD2-213ENST00000540309 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
GPD2-213ENST00000540309 PLCB4Q15147 1175 aa11.66□□□□□ -0.54
GPD2-213ENST00000540309 LMBR1LQ6UX01 489 aa11.66□□□□□ -0.54
GPD2-213ENST00000540309 FNBP4Q8N3X1 1017 aaPredicted RBP11.66□□□□□ -0.54
GPD2-213ENST00000540309 PRPF38AQ8NAV1 312 aaKnown RBP11.66□□□□□ -0.54
GPD2-213ENST00000540309 NOA1Q8NC60 698 aaKnown RBP11.66□□□□□ -0.54
GPD2-213ENST00000540309 NEUROD6Q96NK8 337 aa11.66□□□□□ -0.54
GPD2-213ENST00000540309 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
GPD2-213ENST00000540309 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
GPD2-213ENST00000540309 EPN1Q9Y6I3 576 aaPredicted RBP11.66□□□□□ -0.54
GPD2-213ENST00000540309 NDUFB9Q9Y6M9 179 aa11.66□□□□□ -0.54
GPD2-213ENST00000540309 FAM169AQ9Y6X4 670 aa11.66□□□□□ -0.54
GPD2-213ENST00000540309 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
GPD2-213ENST00000540309 UBN2Q6ZU65 1347 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 GOLGA6CA6NDK9 693 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 FSBPO95073 299 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 GOLGA6DP0CG33 693 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 NNTQ13423 1086 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 MICALCLQ6ZW33 695 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 MMGT1Q8N4V1 131 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 DRC1Q96MC2 740 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 GPHNQ9NQX3 736 aaPredicted RBP11.65□□□□□ -0.54
GPD2-213ENST00000540309 GOLGA6AQ9NYA3 693 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 DONSONQ9NYP3 566 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 RWDD2AQ9UIY3 292 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 PHF8Q9UPP1 1060 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 TJP1Q07157 1748 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 CHD4Q14839 1912 aa11.65□□□□□ -0.54
GPD2-213ENST00000540309 A0A0G2JLW4 131 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 PRAMEF22A3QJZ6 481 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 TMCO5BA8MYB1 307 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 KRT86O43790 486 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 C21orf2O43822 256 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 NDUFA10O95299 355 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 CCDC172P0C7W6 258 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 PSEN1P49768 467 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 TOB1P50616 345 aaPredicted RBP11.65□□□□□ -0.55
GPD2-213ENST00000540309 DRP2Q13474 957 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 EMBQ6PCB8 327 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 TRIM22Q8IYM9 498 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 CCDC170Q8IYT3 715 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 TMTC2Q8N394 836 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 RETREG2Q8NC44 543 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 IGDCC4Q8TDY8 1250 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 AENQ8WTP8 325 aaKnown RBP11.65□□□□□ -0.55
GPD2-213ENST00000540309 DNAJC7Q99615 494 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 CAPS2Q9BXY5 557 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 CNNM2Q9H8M5 875 aa11.65□□□□□ -0.55
GPD2-213ENST00000540309 SETD1BQ9UPS6 1966 aaKnown RBP11.64□□□□□ -0.55
GPD2-213ENST00000540309 TIAM2Q8IVF5 1701 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 GOLGA6BA6NDN3 693 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 PPP1R3GB7ZBB8 358 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 AGPSO00116 658 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 HNRNPH1P31943 449 aaKnown RBP11.64□□□□□ -0.55
GPD2-213ENST00000540309 INPP5BP32019 993 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 MAP2K2P36507 400 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
GPD2-213ENST00000540309 ERVK-24P63145 666 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 CDK17Q00537 523 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 DPYDQ12882 1025 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 TTF1Q15361 905 aaPredicted RBP11.64□□□□□ -0.55
GPD2-213ENST00000540309 UBE3CQ15386 1083 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 C3orf20Q8ND61 904 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 OR8K1Q8NGG5 319 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 CDC5LQ99459 802 aaKnown RBP11.64□□□□□ -0.55
GPD2-213ENST00000540309 CXorf56Q9H5V9 222 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 GJB4Q9NTQ9 266 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 CEP126Q9P2H0 1117 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 DISP2A7MBM2 1401 aa11.64□□□□□ -0.55
GPD2-213ENST00000540309 FOXN1O15353 648 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 DEXIO95424 95 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 GGCXP38435 758 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 TIMM10P62072 90 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 WWC2Q6AWC2 1192 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 XAGE2Q96GT9 111 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 SELENOOQ9BVL4 669 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 TSGA10Q9BZW7 698 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 FAM217BQ9NTX9 383 aaPredicted RBP11.63□□□□□ -0.55
GPD2-213ENST00000540309 RMND1Q9NWS8 449 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 H7C1D1 291 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 GPAA1O43292 621 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 PHACTR2O75167 634 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 MEA1Q16626 185 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 TSR1Q2NL82 804 aaKnown RBP11.63□□□□□ -0.55
GPD2-213ENST00000540309 GLE1Q53GS7 698 aaKnown RBP11.63□□□□□ -0.55
GPD2-213ENST00000540309 TAX1BP1Q86VP1 789 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 DIS3L2Q8IYB7 885 aaKnown RBP11.63□□□□□ -0.55
GPD2-213ENST00000540309 TRMT44Q8IYL2 757 aaKnown RBP11.63□□□□□ -0.55
GPD2-213ENST00000540309 CABS1Q96KC9 395 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 PURBQ96QR8 312 aaKnown RBP11.63□□□□□ -0.55
GPD2-213ENST00000540309 NUP58Q9BVL2 599 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 ZNHIT6Q9NWK9 470 aaKnown RBP11.63□□□□□ -0.55
GPD2-213ENST00000540309 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
GPD2-213ENST00000540309 CEP83Q9Y592 693 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 AKAP11Q9UKA4 1901 aa11.63□□□□□ -0.55
GPD2-213ENST00000540309 LOC102724159A0A0B4J2E5 919 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 GOLGA8AA7E2F4 631 aa11.62□□□□□ -0.55
GPD2-213ENST00000540309 N4BP3O15049 544 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms