RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 FGD1P98174 961 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 SEC23AQ15436 765 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 ABCB5Q2M3G0 1257 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 TMEM67Q5HYA8 995 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 FBXL16Q8N461 479 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 C2orf69Q8N8R5 385 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 IL27Q8NEV9 243 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 LARP6Q9BRS8 491 aaKnown RBP22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 SENP2Q9HC62 589 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 WBP1LQ9NX94 342 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 ZNF112Q9UJU3 913 aa22.25■■□□□ 1.15
TNFRSF1A-213ENST00000540022 IGKV6D-41A0A0C4DH26 115 aa22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 GH2P01242 217 aa22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 INPP5BP32019 993 aa22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 GUCY1A2P33402 732 aa22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 NF2P35240 595 aa22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 SART3Q15020 963 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 NOL8Q76FK4 1167 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 ENAHQ8N8S7 591 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 BRF1Q92994 677 aa22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 LY9Q9HBG7 655 aa22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 ANGEL1Q9UNK9 670 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1A-213ENST00000540022 UBE2Q2LH0YL09 131 aa22.23■■□□□ 1.15
TNFRSF1A-213ENST00000540022 AOC2O75106 756 aa22.23■■□□□ 1.15
TNFRSF1A-213ENST00000540022 RCSD1Q6JBY9 416 aa22.23■■□□□ 1.15
TNFRSF1A-213ENST00000540022 CLEC10AQ8IUN9 316 aa22.23■■□□□ 1.15
TNFRSF1A-213ENST00000540022 CEP95Q96GE4 821 aa22.23■■□□□ 1.15
TNFRSF1A-213ENST00000540022 WRNIP1Q96S55 665 aa22.23■■□□□ 1.15
TNFRSF1A-213ENST00000540022 ERICH2A1L162 156 aa22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 FOXN1O15353 648 aa22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 TTLL12Q14166 644 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 WTAPQ15007 396 aa22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 SEPT2Q15019 361 aa22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 TMEM179Q6ZVK1 233 aa22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 SNX21Q969T3 373 aa22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 CABP5Q9NP86 173 aa22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 MTMR4Q9NYA4 1195 aa22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 ZBTB21Q9ULJ3 1066 aa22.22■■□□□ 1.15
TNFRSF1A-213ENST00000540022 PPP1R12BO60237 982 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 CTNND1O60716 968 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 LIFRP42702 1097 aa22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 APOBRQ0VD83 1088 aa22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 ANKRD1Q15327 319 aa22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 COL13A1Q5TAT6 717 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.21■■□□□ 1.153e-7■■■■□ 25.5
TNFRSF1A-213ENST00000540022 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 MAP2K2P36507 400 aa22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 ANP32AP39687 249 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 NOVP48745 357 aa22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 MAP2K1Q02750 393 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 CCDC178Q5BJE1 867 aa22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 DGKHQ86XP1 1220 aa22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 ZKSCAN4Q969J2 545 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 STX8Q9UNK0 236 aa22.21■■□□□ 1.15
TNFRSF1A-213ENST00000540022 RAB3GAP1Q15042 981 aa22.2■■□□□ 1.14
TNFRSF1A-213ENST00000540022 IFIT1BQ5T764 474 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1A-213ENST00000540022 RGMBQ6NW40 437 aa22.2■■□□□ 1.14
TNFRSF1A-213ENST00000540022 SGMS1Q86VZ5 419 aa22.2■■□□□ 1.14
TNFRSF1A-213ENST00000540022 ANKS1AQ92625 1134 aa22.2■■□□□ 1.14
TNFRSF1A-213ENST00000540022 KANSL2Q9H9L4 492 aa22.2■■□□□ 1.14
TNFRSF1A-213ENST00000540022 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.2■■□□□ 1.14
TNFRSF1A-213ENST00000540022 BRPF3Q9ULD4 1205 aa22.2■■□□□ 1.14
TNFRSF1A-213ENST00000540022 TPCN1Q9ULQ1 816 aa22.2■■□□□ 1.14
TNFRSF1A-213ENST00000540022 ASNSP08243 561 aa22.19■■□□□ 1.14
TNFRSF1A-213ENST00000540022 MAP3K11Q16584 847 aa22.19■■□□□ 1.14
TNFRSF1A-213ENST00000540022 SIAH1Q8IUQ4 282 aa22.19■■□□□ 1.14
TNFRSF1A-213ENST00000540022 TMTC2Q8N394 836 aa22.19■■□□□ 1.14
TNFRSF1A-213ENST00000540022 CLMNQ96JQ2 1002 aa22.19■■□□□ 1.14
TNFRSF1A-213ENST00000540022 TBC1D2Q9BYX2 928 aa22.19■■□□□ 1.14
TNFRSF1A-213ENST00000540022 FAM155AB1AL88 458 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 MCM2P49736 904 aa22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 EVCP57679 992 aa22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 FKBP1BP68106 108 aa22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 ICA1Q05084 483 aa22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 NFXL1Q6ZNB6 911 aa22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 CCDC84Q86UT8 332 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 SCYL3Q8IZE3 742 aa22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 ZIC5Q96T25 663 aa22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 LIMCH1Q9UPQ0 1083 aa22.18■■□□□ 1.14
TNFRSF1A-213ENST00000540022 KLF18A0A0U1RQI7 1052 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 CCDC69A6NI79 296 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 LARGE1O95461 756 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 TTLL1O95922 423 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 EEF2P13639 858 aaKnown RBP22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 IREB2P48200 963 aaKnown RBP22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 MAP3K9P80192 1104 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 LDLRAD1Q5T700 205 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 ARMC9Q7Z3E5 817 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 TMEM47Q9BQJ4 181 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 GINM1Q9NU53 330 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 NYAP2Q9P242 653 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 CLIP2Q9UDT6 1046 aa22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 GREB1LQ9C091 1923 aaPredicted RBP22.17■■□□□ 1.14
TNFRSF1A-213ENST00000540022 ME3Q16798 604 aa22.16■■□□□ 1.14
TNFRSF1A-213ENST00000540022 NOL9Q5SY16 702 aaKnown RBP22.16■■□□□ 1.14
TNFRSF1A-213ENST00000540022 HSCBQ8IWL3 235 aa22.16■■□□□ 1.14
TNFRSF1A-213ENST00000540022 K7ELQ4 463 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF1A-213ENST00000540022 TOP1P11387 765 aaKnown RBP22.16■■□□□ 1.14
TNFRSF1A-213ENST00000540022 ZNF157P51786 506 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms