RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 IL25Q9H293 177 aa15.98■□□□□ 0.15
PRPF19-204ENST00000539960 TMOD4Q9NZQ9 345 aa15.98■□□□□ 0.15
PRPF19-204ENST00000539960 AGTPBP1Q9UPW5 1226 aa15.98■□□□□ 0.15
PRPF19-204ENST00000539960 SLC45A1Q9Y2W3 748 aa15.98■□□□□ 0.15
PRPF19-204ENST00000539960 PRDM1O75626 825 aa15.97■□□□□ 0.15
PRPF19-204ENST00000539960 CTDSPL2Q05D32 466 aa15.97■□□□□ 0.15
PRPF19-204ENST00000539960 COL13A1Q5TAT6 717 aaPredicted RBP15.97■□□□□ 0.15
PRPF19-204ENST00000539960 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
PRPF19-204ENST00000539960 KIAA1683Q9H0B3 1180 aa15.97■□□□□ 0.15
PRPF19-204ENST00000539960 KANSL2Q9H9L4 492 aa15.97■□□□□ 0.15
PRPF19-204ENST00000539960 INCENPQ9NQS7 918 aa15.97■□□□□ 0.15
PRPF19-204ENST00000539960 EMILIN3Q9NT22 766 aa15.97■□□□□ 0.15
PRPF19-204ENST00000539960 ZMYM6O95789 1325 aa15.96■□□□□ 0.15
PRPF19-204ENST00000539960 RAD50Q92878 1312 aa15.96■□□□□ 0.15
PRPF19-204ENST00000539960 A0A1W2PRG0 241 aa15.96■□□□□ 0.15
PRPF19-204ENST00000539960 TLR2O60603 784 aa15.96■□□□□ 0.15
PRPF19-204ENST00000539960 FGRP09769 529 aa15.96■□□□□ 0.15
PRPF19-204ENST00000539960 USP14P54578 494 aa15.96■□□□□ 0.15
PRPF19-204ENST00000539960 DGKZQ13574 1117 aa15.96■□□□□ 0.15
PRPF19-204ENST00000539960 TREML2Q5T2D2 321 aa15.96■□□□□ 0.15
PRPF19-204ENST00000539960 ZNF296Q8WUU4 475 aaPredicted RBP15.96■□□□□ 0.15
PRPF19-204ENST00000539960 FEZ1Q99689 392 aa15.96■□□□□ 0.15
PRPF19-204ENST00000539960 LAMB1P07942 1786 aa15.95■□□□□ 0.14
PRPF19-204ENST00000539960 SGSM2O43147 1006 aa15.95■□□□□ 0.14
PRPF19-204ENST00000539960 FKTNO75072 461 aa15.95■□□□□ 0.14
PRPF19-204ENST00000539960 ICA1Q05084 483 aa15.95■□□□□ 0.14
PRPF19-204ENST00000539960 PABPC4Q13310 644 aaKnown RBP eCLIP15.95■□□□□ 0.14
PRPF19-204ENST00000539960 C12orf42Q96LP6 360 aa15.95■□□□□ 0.14
PRPF19-204ENST00000539960 CTNNA3Q9UI47 895 aa15.95■□□□□ 0.14
PRPF19-204ENST00000539960 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.95■□□□□ 0.14
PRPF19-204ENST00000539960 TACC3Q9Y6A5 838 aa15.95■□□□□ 0.14
PRPF19-204ENST00000539960 PHIPQ8WWQ0 1821 aa15.95■□□□□ 0.14
PRPF19-204ENST00000539960 ZNF213O14771 459 aa15.94■□□□□ 0.14
PRPF19-204ENST00000539960 CYP2C8P10632 490 aa15.94■□□□□ 0.14
PRPF19-204ENST00000539960 EEF2P13639 858 aaKnown RBP15.94■□□□□ 0.14
PRPF19-204ENST00000539960 OSBPP22059 807 aa15.94■□□□□ 0.14
PRPF19-204ENST00000539960 HOXA7P31268 230 aaPredicted RBP15.94■□□□□ 0.14
PRPF19-204ENST00000539960 HAND2P61296 217 aa15.94■□□□□ 0.14
PRPF19-204ENST00000539960 TFAP4Q01664 338 aa15.94■□□□□ 0.14
PRPF19-204ENST00000539960 C17orf99Q6UX52 265 aa15.94■□□□□ 0.14
PRPF19-204ENST00000539960 NEDD1Q8NHV4 660 aa15.94■□□□□ 0.14
PRPF19-204ENST00000539960 PARK7Q99497 189 aaKnown RBP15.94■□□□□ 0.14
PRPF19-204ENST00000539960 ARHGEF10LQ9HCE6 1279 aa15.94■□□□□ 0.14
PRPF19-204ENST00000539960 TMX2Q9Y320 296 aa15.94■□□□□ 0.14
PRPF19-204ENST00000539960 IGKV6D-41A0A0C4DH26 115 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 ORC4O43929 436 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 TSPY3P0CV98 308 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 TSPY8P0CW00 308 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 SP3Q02447 781 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 PTH1RQ03431 593 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 ZYXQ15942 572 aaKnown RBP15.93■□□□□ 0.14
PRPF19-204ENST00000539960 FAM47AQ5JRC9 791 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 CLEC10AQ8IUN9 316 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 ASCC2Q9H1I8 757 aaPredicted RBP15.93■□□□□ 0.14
PRPF19-204ENST00000539960 SH2D4AQ9H788 454 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 NYAP2Q9P242 653 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 PNMA3Q9UL41 463 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 ATAD5Q96QE3 1844 aa15.93■□□□□ 0.14
PRPF19-204ENST00000539960 PCP11498 1178 aaKnown RBP15.92■□□□□ 0.14
PRPF19-204ENST00000539960 ATP2B2Q01814 1243 aa15.92■□□□□ 0.14
PRPF19-204ENST00000539960 IMMTQ16891 758 aaKnown RBP15.92■□□□□ 0.14
PRPF19-204ENST00000539960 AKNAD1Q5T1N1 836 aa15.92■□□□□ 0.14
PRPF19-204ENST00000539960 MFSD6Q6ZSS7 791 aa15.92■□□□□ 0.14
PRPF19-204ENST00000539960 ESYT1Q9BSJ8 1104 aa15.92■□□□□ 0.14
PRPF19-204ENST00000539960 NBPF3Q9H094 633 aa15.92■□□□□ 0.14
PRPF19-204ENST00000539960 MTMR4Q9NYA4 1195 aa15.92■□□□□ 0.14
PRPF19-204ENST00000539960 CPA4Q9UI42 421 aa15.92■□□□□ 0.14
PRPF19-204ENST00000539960 ADGRA2Q96PE1 1338 aa15.92■□□□□ 0.14
PRPF19-204ENST00000539960 TSPY2A6NKD2 308 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 USP17L15C9J2P7 530 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 USP17L13C9JLJ4 530 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 USP17L11C9JVI0 530 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 USP17L18D6R9N7 530 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 USP17L22D6RA61 530 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 USP17L17D6RBQ6 530 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 USP17L19D6RCP7 530 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 USP17L20D6RJB6 530 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 RANBP6O60518 1105 aaKnown RBP15.91■□□□□ 0.14
PRPF19-204ENST00000539960 USP17L24Q0WX57 530 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 KIAA1211Q6ZU35 1233 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 SMCR8Q8TEV9 937 aaPredicted RBP15.91■□□□□ 0.14
PRPF19-204ENST00000539960 STAG1Q8WVM7 1258 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 MKL1Q969V6 931 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 CEP95Q96GE4 821 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 P2RX7Q99572 595 aaKnown RBP15.91■□□□□ 0.14
PRPF19-204ENST00000539960 RNF41Q9H4P4 317 aaPredicted RBP15.91■□□□□ 0.14
PRPF19-204ENST00000539960 TOMM22Q9NS69 142 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 CLIP2Q9UDT6 1046 aa15.91■□□□□ 0.14
PRPF19-204ENST00000539960 BCRP11274 1271 aa15.9■□□□□ 0.14
PRPF19-204ENST00000539960 VCAM1P19320 739 aa15.9■□□□□ 0.14
PRPF19-204ENST00000539960 GCLCP48506 637 aaPredicted RBP15.9■□□□□ 0.14
PRPF19-204ENST00000539960 IRX3P78415 501 aaPredicted RBP15.9■□□□□ 0.14
PRPF19-204ENST00000539960 RRP12Q5JTH9 1297 aaKnown RBP15.9■□□□□ 0.14
PRPF19-204ENST00000539960 KIAA1755Q5JYT7 1200 aa15.9■□□□□ 0.14
PRPF19-204ENST00000539960 CATSPERGQ6ZRH7 1159 aa15.9■□□□□ 0.14
PRPF19-204ENST00000539960 TBC1D10CQ8IV04 446 aa15.9■□□□□ 0.14
PRPF19-204ENST00000539960 LPAR1Q92633 364 aa15.9■□□□□ 0.14
PRPF19-204ENST00000539960 MAP4K1Q92918 833 aa15.9■□□□□ 0.14
PRPF19-204ENST00000539960 ERO1AQ96HE7 468 aa15.9■□□□□ 0.14
PRPF19-204ENST00000539960 VCPKMTQ9H867 229 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms