RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 KIF1BPQ96EK5 621 aa9.61□□□□□ -0.87
LDHA-217ENST00000539814 FAM84BQ96KN1 310 aaPredicted RBP9.61□□□□□ -0.87
LDHA-217ENST00000539814 EYA3Q99504 573 aa9.61□□□□□ -0.87
LDHA-217ENST00000539814 LRRCC1Q9C099 1032 aa9.61□□□□□ -0.87
LDHA-217ENST00000539814 DBNLQ9UJU6 430 aaKnown RBP9.61□□□□□ -0.87
LDHA-217ENST00000539814 RAB11FIP3O75154 756 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 P4HBP07237 508 aaKnown RBP9.6□□□□□ -0.87
LDHA-217ENST00000539814 IFIT1P09914 478 aaKnown RBP9.6□□□□□ -0.87
LDHA-217ENST00000539814 GGCXP38435 758 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 SCARF1Q14162 830 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 NBPF20Q3BBV1 942 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 HSP90AB4PQ58FF6 505 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 PI16Q6UXB8 463 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 SMC5Q8IY18 1101 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 SLC10A4Q96EP9 437 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 CCDC136Q96JN2 1154 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 BACH2Q9BYV9 841 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 LNPKQ9C0E8 428 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 SLC6A16Q9GZN6 736 aa9.6□□□□□ -0.87
LDHA-217ENST00000539814 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.6□□□□□ -0.87
LDHA-217ENST00000539814 KDM2BQ8NHM5 1336 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 M0R2N6 131 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 HIBADHP31937 336 aaKnown RBP9.59□□□□□ -0.87
LDHA-217ENST00000539814 CHAF1AQ13111 956 aaPredicted RBP9.59□□□□□ -0.87
LDHA-217ENST00000539814 MRPL58Q14197 206 aaKnown RBP9.59□□□□□ -0.87
LDHA-217ENST00000539814 NAA30Q147X3 362 aaPredicted RBP9.59□□□□□ -0.87
LDHA-217ENST00000539814 AGERQ15109 404 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
LDHA-217ENST00000539814 ZNF804AQ7Z570 1209 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 VPS37DQ86XT2 251 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 ZNF526Q8TF50 670 aaPredicted RBP9.59□□□□□ -0.87
LDHA-217ENST00000539814 JDP2Q8WYK2 163 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 CD209Q9NNX6 404 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 AKAP2Q9Y2D5 859 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 GJA3Q9Y6H8 435 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 ADAMTSL1Q8N6G6 1762 aa9.59□□□□□ -0.87
LDHA-217ENST00000539814 PSME4Q14997 1843 aa9.59□□□□□ -0.88
LDHA-217ENST00000539814 SHTN1A0MZ66 631 aa9.58□□□□□ -0.88
LDHA-217ENST00000539814 IFIT2P09913 472 aaKnown RBP9.58□□□□□ -0.88
LDHA-217ENST00000539814 CXCL9Q07325 125 aa9.58□□□□□ -0.88
LDHA-217ENST00000539814 GORABQ5T7V8 394 aa9.58□□□□□ -0.88
LDHA-217ENST00000539814 C15orf52Q6ZUT6 534 aaKnown RBP9.58□□□□□ -0.88
LDHA-217ENST00000539814 TMC7Q7Z402 723 aa9.58□□□□□ -0.88
LDHA-217ENST00000539814 BPHLQ86WA6 291 aaPredicted RBP9.58□□□□□ -0.88
LDHA-217ENST00000539814 CLASRPQ8N2M8 674 aaKnown RBP9.58□□□□□ -0.88
LDHA-217ENST00000539814 COL26A1Q96A83 441 aa9.58□□□□□ -0.88
LDHA-217ENST00000539814 GCC1Q96CN9 775 aa9.58□□□□□ -0.88
LDHA-217ENST00000539814 ZNRF3Q9ULT6 936 aa9.58□□□□□ -0.88
LDHA-217ENST00000539814 AKAP11Q9UKA4 1901 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 RNF223E7ERA6 249 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 FZD9O00144 591 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 PSMD14O00487 310 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 SCAMP3O14828 347 aaKnown RBP9.57□□□□□ -0.88
LDHA-217ENST00000539814 DDNO94850 711 aaPredicted RBP9.57□□□□□ -0.88
LDHA-217ENST00000539814 FAM13AO94988 1023 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 NUCB1Q02818 461 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 RASGRF1Q13972 1273 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 GRIK5Q16478 980 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 CAVIN4Q5BKX8 364 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 TTC39AQ5SRH9 613 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 RBCK1Q9BYM8 510 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 COA1Q9GZY4 146 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 GPR108Q9NPR9 543 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 PPP4R2Q9NY27 417 aa9.57□□□□□ -0.88
LDHA-217ENST00000539814 MYO5AQ9Y4I1 1855 aaKnown RBP9.57□□□□□ -0.88
LDHA-217ENST00000539814 F8W031 263 aaPredicted RBP9.56□□□□□ -0.88
LDHA-217ENST00000539814 FRAT2O75474 233 aaPredicted RBP9.56□□□□□ -0.88
LDHA-217ENST00000539814 MAP4K4O95819 1239 aaPredicted RBP9.56□□□□□ -0.88
LDHA-217ENST00000539814 IL1R1P14778 569 aa9.56□□□□□ -0.88
LDHA-217ENST00000539814 MCAMP43121 646 aa9.56□□□□□ -0.88
LDHA-217ENST00000539814 EIF6P56537 245 aaKnown RBP9.56□□□□□ -0.88
LDHA-217ENST00000539814 HDLBPQ00341 1268 aaKnown RBP9.56□□□□□ -0.88
LDHA-217ENST00000539814 CHD1LQ86WJ1 897 aa9.56□□□□□ -0.88
LDHA-217ENST00000539814 CERS5Q8N5B7 392 aa9.56□□□□□ -0.88
LDHA-217ENST00000539814 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.56□□□□□ -0.881e-6■■■■□ 20.5
LDHA-217ENST00000539814 TDRD7Q8NHU6 1098 aaKnown RBP9.56□□□□□ -0.88
LDHA-217ENST00000539814 EDC3Q96F86 508 aaKnown RBP9.56□□□□□ -0.88
LDHA-217ENST00000539814 ESPNB1AK53 854 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 NDUFB5O43674 189 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 GMPSP49915 693 aaPredicted RBP9.55□□□□□ -0.88
LDHA-217ENST00000539814 DACT2Q5SW24 774 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 TTLL5Q6EMB2 1281 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 CIAPIN1Q6FI81 312 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 CENPQQ7L2Z9 268 aaPredicted RBP9.55□□□□□ -0.88
LDHA-217ENST00000539814 FOXJ1Q92949 421 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 DNAJC2Q99543 621 aaKnown RBP9.55□□□□□ -0.88
LDHA-217ENST00000539814 VPS33BQ9H267 617 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 BOLA2Q9H3K6 86 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 ZNF358Q9NW07 568 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 HMG20BQ9P0W2 317 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 SALL3Q9BXA9 1300 aa9.55□□□□□ -0.88
LDHA-217ENST00000539814 RGS20O76081 388 aa9.54□□□□□ -0.88
LDHA-217ENST00000539814 MYCP01106 439 aaPredicted RBP9.54□□□□□ -0.88
LDHA-217ENST00000539814 NPR3P17342 541 aa9.54□□□□□ -0.88
LDHA-217ENST00000539814 MX1P20591 662 aa9.54□□□□□ -0.88
LDHA-217ENST00000539814 IGFBP4P22692 258 aa9.54□□□□□ -0.88
LDHA-217ENST00000539814 MPSTP25325 297 aa9.54□□□□□ -0.88
LDHA-217ENST00000539814 ZAP70P43403 619 aa9.54□□□□□ -0.88
LDHA-217ENST00000539814 FMR1Q06787 632 aaKnown RBP eCLIP9.54□□□□□ -0.88
LDHA-217ENST00000539814 LINC01559Q495D7 138 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms