RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SHROOM1Q2M3G4 852 aaPredicted RBP18.15■□□□□ 0.5
DDB1-216ENST00000539739 ERO1BQ86YB8 467 aa18.15■□□□□ 0.5
DDB1-216ENST00000539739 ZSCAN10Q96SZ4 725 aaPredicted RBP18.15■□□□□ 0.5
DDB1-216ENST00000539739 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.15■□□□□ 0.5
DDB1-216ENST00000539739 ZSWIM6Q9HCJ5 1215 aa18.15■□□□□ 0.5
DDB1-216ENST00000539739 WDR19Q8NEZ3 1342 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 IGKV6D-41A0A0C4DH26 115 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 IFIT3O14879 490 aaKnown RBP18.14■□□□□ 0.49
DDB1-216ENST00000539739 GUCY1A2P33402 732 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 RUFY3Q7L099 469 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 CHST3Q7LGC8 479 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 NKX2-3Q8TAU0 364 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 CEP95Q96GE4 821 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 TMEM87BQ96K49 555 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 ZKSCAN3Q9BRR0 538 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 CREBZFQ9NS37 354 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 MTMR4Q9NYA4 1195 aa18.14■□□□□ 0.49
DDB1-216ENST00000539739 TTLL1O95922 423 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 FGD1P98174 961 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 PPATQ06203 517 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 TTC14Q96N46 770 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 ARHGEF10LQ9HCE6 1279 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 IL17RBQ9NRM6 502 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 NYAP2Q9P242 653 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 STX8Q9UNK0 236 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 ZHX2Q9Y6X8 837 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 TNKSO95271 1327 aa18.13■□□□□ 0.49
DDB1-216ENST00000539739 SPDYE5A6NIY4 337 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 NMT2O60551 498 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 ANTXR2P58335 489 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 EXOSC10Q01780 885 aaKnown RBP18.12■□□□□ 0.49
DDB1-216ENST00000539739 RGMBQ6NW40 437 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 DGKHQ86XP1 1220 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 HHIPL1Q96JK4 782 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
DDB1-216ENST00000539739 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.12■□□□□ 0.49
DDB1-216ENST00000539739 CLIP2Q9UDT6 1046 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 DOCK1Q14185 1865 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 EEF2P13639 858 aaKnown RBP18.12■□□□□ 0.49
DDB1-216ENST00000539739 CPA1P15085 419 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 ZNF157P51786 506 aaPredicted RBP18.12■□□□□ 0.49
DDB1-216ENST00000539739 WTAPQ15007 396 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 TMEM67Q5HYA8 995 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 ZNF280CQ8ND82 737 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 OPTNQ96CV9 577 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 OTUD5Q96G74 571 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 WDR18Q9BV38 432 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 SH2D4AQ9H788 454 aa18.12■□□□□ 0.49
DDB1-216ENST00000539739 RABEP1Q15276 862 aa18.11■□□□□ 0.49
DDB1-216ENST00000539739 IFIT1BQ5T764 474 aaKnown RBP18.11■□□□□ 0.49
DDB1-216ENST00000539739 CCDC84Q86UT8 332 aaPredicted RBP18.11■□□□□ 0.49
DDB1-216ENST00000539739 CLEC10AQ8IUN9 316 aa18.11■□□□□ 0.49
DDB1-216ENST00000539739 TMTC2Q8N394 836 aa18.11■□□□□ 0.49
DDB1-216ENST00000539739 ENAHQ8N8S7 591 aaPredicted RBP18.11■□□□□ 0.49
DDB1-216ENST00000539739 PDRG1Q9NUG6 133 aa18.11■□□□□ 0.49
DDB1-216ENST00000539739 OTOFQ9HC10 1997 aa18.11■□□□□ 0.49
DDB1-216ENST00000539739 NEK4P51957 841 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 SPP2Q13103 211 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 PPIL2Q13356 520 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 COL9A3Q14050 684 aaPredicted RBP18.1■□□□□ 0.49
DDB1-216ENST00000539739 IL27Q8NEV9 243 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 IGDCC4Q8TDY8 1250 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 MKL1Q969V6 931 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 TCEANC2Q96MN5 208 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 KIF2CQ99661 725 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 FEZ1Q99689 392 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 LRRC2Q9BYS8 371 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 AFG3L2Q9Y4W6 797 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 ATAD5Q96QE3 1844 aa18.1■□□□□ 0.49
DDB1-216ENST00000539739 USP17L10C9JJH3 530 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 TOP1P11387 765 aaKnown RBP18.09■□□□□ 0.49
DDB1-216ENST00000539739 LIFRP42702 1097 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 NOVP48745 357 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 SEC23AQ15436 765 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 Q6ZUG5 572 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 CNKSR2Q8WXI2 1034 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 ANKS1AQ92625 1134 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 CCDC102AQ96A19 550 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 WNK4Q96J92 1243 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 KAT14Q9H8E8 782 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 SYNPO2Q9UMS6 1093 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 GREB1LQ9C091 1923 aaPredicted RBP18.09■□□□□ 0.49
DDB1-216ENST00000539739 TRIM75PA6NK02 468 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 SH2B2O14492 632 aaPredicted RBP18.09■□□□□ 0.49
DDB1-216ENST00000539739 CXCL11O14625 94 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 ZBTB48P10074 688 aaPredicted RBP18.09■□□□□ 0.49
DDB1-216ENST00000539739 USP14P54578 494 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 C1QTNF8P60827 252 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 RCSD1Q6JBY9 416 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 NFXL1Q6ZNB6 911 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 PAXIP1Q6ZW49 1069 aaPredicted RBP18.09■□□□□ 0.49
DDB1-216ENST00000539739 SIAH1Q8IUQ4 282 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 ACER1Q8TDN7 264 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 TMEM47Q9BQJ4 181 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 TMX2Q9Y320 296 aa18.09■□□□□ 0.49
DDB1-216ENST00000539739 A0A1W2PRG0 241 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 CCDC69A6NI79 296 aa18.08■□□□□ 0.48
DDB1-216ENST00000539739 C19orf81C9J6K1 198 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms