RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CABP5Q9NP86 173 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 RAB21Q9UL25 225 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 SLC4A4Q9Y6R1 1079 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 MAP2K7O14733 419 aa15.05■□□□□ 0
UBE3B-209ENST00000539584 PRPF3O43395 683 aaKnown RBP15.05■□□□□ 0
UBE3B-209ENST00000539584 MFAP3LO75121 409 aa15.05■□□□□ 0
UBE3B-209ENST00000539584 PIP4K2BP78356 416 aa15.05■□□□□ 0
UBE3B-209ENST00000539584 GRIN1Q05586 938 aa15.05■□□□□ 0
UBE3B-209ENST00000539584 RASGRF1Q13972 1273 aa15.05■□□□□ 0
UBE3B-209ENST00000539584 MSANTD4Q8NCY6 345 aa15.05■□□□□ 0
UBE3B-209ENST00000539584 ANKRD20A12PQ8NF67 263 aa15.05■□□□□ 0
UBE3B-209ENST00000539584 ARMT1Q9H993 441 aa15.05■□□□□ 0
UBE3B-209ENST00000539584 CHD4Q14839 1912 aa15.05■□□□□ -0
UBE3B-209ENST00000539584 OAS2P29728 719 aaKnown RBP15.05■□□□□ -0
UBE3B-209ENST00000539584 IL6STP40189 918 aaPredicted RBP15.05■□□□□ -0
UBE3B-209ENST00000539584 TRAPPC10P48553 1259 aa15.05■□□□□ -0
UBE3B-209ENST00000539584 DPYDQ12882 1025 aa15.05■□□□□ -0
UBE3B-209ENST00000539584 NR5A1Q13285 461 aa15.05■□□□□ -0
UBE3B-209ENST00000539584 TRMT44Q8IYL2 757 aaKnown RBP15.05■□□□□ -0
UBE3B-209ENST00000539584 PIGBQ92521 554 aa15.05■□□□□ -0
UBE3B-209ENST00000539584 PAGE5Q96GU1 130 aa15.05■□□□□ -0
UBE3B-209ENST00000539584 PHF20Q9BVI0 1012 aa15.05■□□□□ -0
UBE3B-209ENST00000539584 CTAGE9A4FU28 777 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 EIF3JO75822 258 aaKnown RBP15.04■□□□□ -0
UBE3B-209ENST00000539584 SASH3O75995 380 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 GPTP24298 496 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 RBL2Q08999 1139 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 WHAMMP3Q1A5X7 153 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 LONRF2Q1L5Z9 754 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 ZNF34Q8IZ26 560 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 MRPL44Q9H9J2 332 aaKnown RBP15.04■□□□□ -0
UBE3B-209ENST00000539584 SOS2Q07890 1332 aaPredicted RBP15.04■□□□□ -0
UBE3B-209ENST00000539584 TOGARAM1Q9Y4F4 1720 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 TULP2O00295 520 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 SEC31AO94979 1220 aaKnown RBP15.04■□□□□ -0
UBE3B-209ENST00000539584 CYP19A1P11511 503 aaPredicted RBP15.04■□□□□ -0
UBE3B-209ENST00000539584 PPARAQ07869 468 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 SLC20A2Q08357 652 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 SEC23AQ15436 765 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 ZNF827Q17R98 1081 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 HDXQ7Z353 690 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 TOMM22Q9NS69 142 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 RMND1Q9NWS8 449 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 LIMA1Q9UHB6 759 aaKnown RBP15.04■□□□□ -0
UBE3B-209ENST00000539584 ASAP1Q9ULH1 1129 aa15.04■□□□□ -0
UBE3B-209ENST00000539584 ERICH4A6NGS2 130 aa15.03■□□□□ -0
UBE3B-209ENST00000539584 SOWAHDA6NJG2 315 aa15.03■□□□□ -0
UBE3B-209ENST00000539584 RRP12Q5JTH9 1297 aaKnown RBP15.03■□□□□ -0
UBE3B-209ENST00000539584 SYNE4Q8N205 404 aa15.03■□□□□ -0
UBE3B-209ENST00000539584 IQUBQ8NA54 791 aa15.03■□□□□ -0
UBE3B-209ENST00000539584 INCENPQ9NQS7 918 aa15.03■□□□□ -0
UBE3B-209ENST00000539584 CWC15Q9P013 229 aaKnown RBP15.03■□□□□ -0
UBE3B-209ENST00000539584 RWDD2AQ9UIY3 292 aa15.03■□□□□ -0
UBE3B-209ENST00000539584 TACC3Q9Y6A5 838 aa15.03■□□□□ -0
UBE3B-209ENST00000539584 BCL9LQ86UU0 1499 aa15.03■□□□□ -0
UBE3B-209ENST00000539584 COL22A1Q8NFW1 1626 aaPredicted RBP15.02■□□□□ -0
UBE3B-209ENST00000539584 PPP1R3GB7ZBB8 358 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 UBE2Q2LH0YL09 131 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 NT5C2P49902 561 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 EVA1CP58658 441 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 HSP90AA4PQ58FG1 418 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 CYP26C1Q6V0L0 522 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 RAD9BQ6WBX8 426 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 CATIPQ7Z7H3 387 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 LCORLQ8N3X6 602 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 NUP133Q8WUM0 1156 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 DESI2Q9BSY9 194 aa15.02■□□□□ -0
UBE3B-209ENST00000539584 BCORQ6W2J9 1755 aa15.02□□□□□ -0.01
UBE3B-209ENST00000539584 TEX33O43247 280 aa15.02□□□□□ -0.01
UBE3B-209ENST00000539584 DDAH1O94760 285 aa15.02□□□□□ -0.01
UBE3B-209ENST00000539584 KARSQ15046 597 aaKnown RBP15.02□□□□□ -0.01
UBE3B-209ENST00000539584 BRINP3Q76B58 766 aa15.02□□□□□ -0.01
UBE3B-209ENST00000539584 SYMPKQ92797 1274 aaKnown RBP15.02□□□□□ -0.01
UBE3B-209ENST00000539584 TNKSO95271 1327 aa15.01□□□□□ -0.01
UBE3B-209ENST00000539584 POLR3GO15318 223 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-209ENST00000539584 GTF2E1P29083 439 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-209ENST00000539584 HNRNPH2P55795 449 aaKnown RBP15.01□□□□□ -0.01
UBE3B-209ENST00000539584 ATP2C1P98194 919 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-209ENST00000539584 PKN1Q16512 942 aa15.01□□□□□ -0.01
UBE3B-209ENST00000539584 KIF4BQ2VIQ3 1234 aa15.01□□□□□ -0.01
UBE3B-209ENST00000539584 IQCA1Q86XH1 822 aa15.01□□□□□ -0.01
UBE3B-209ENST00000539584 GRAMD1CQ8IYS0 662 aa15.01□□□□□ -0.01
UBE3B-209ENST00000539584 OXER1Q8TDS5 423 aa15.01□□□□□ -0.01
UBE3B-209ENST00000539584 NAPGQ99747 312 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-209ENST00000539584 ACBD3Q9H3P7 528 aa15.01□□□□□ -0.01
UBE3B-209ENST00000539584 FGRP09769 529 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
UBE3B-209ENST00000539584 MCM3P25205 808 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 FUT2Q10981 343 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 BEND6Q5SZJ8 279 aaPredicted RBP15□□□□□ -0.01
UBE3B-209ENST00000539584 USP49Q70CQ1 688 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 DZIP3Q86Y13 1208 aaKnown RBP15□□□□□ -0.01
UBE3B-209ENST00000539584 ZSCAN10Q96SZ4 725 aaPredicted RBP15□□□□□ -0.01
UBE3B-209ENST00000539584 LZTFL1Q9NQ48 299 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 LRP2BPQ9P2M1 347 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 MYO5AQ9Y4I1 1855 aaKnown RBP15□□□□□ -0.01
UBE3B-209ENST00000539584 DISP2A7MBM2 1401 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 CTAGE15A4D2H0 777 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 PRKAB2O43741 272 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 GTPBP6O43824 516 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms