RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 SBK1Q52WX2 424 aa18.78■□□□□ 0.6
CIT-210ENST00000539413 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
CIT-210ENST00000539413 GNRH1P01148 92 aa18.77■□□□□ 0.6
CIT-210ENST00000539413 GNAT2P19087 354 aa18.77■□□□□ 0.6
CIT-210ENST00000539413 HOXA7P31268 230 aaPredicted RBP18.77■□□□□ 0.6
CIT-210ENST00000539413 TMEM179Q6ZVK1 233 aa18.77■□□□□ 0.6
CIT-210ENST00000539413 C12orf42Q96LP6 360 aa18.77■□□□□ 0.6
CIT-210ENST00000539413 KIAA1683Q9H0B3 1180 aa18.77■□□□□ 0.6
CIT-210ENST00000539413 A0A1W2PRG0 241 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 MINDY4BA8MYZ0 360 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 PATL2C9JE40 543 aaKnown RBP18.76■□□□□ 0.59
CIT-210ENST00000539413 APPP05067 770 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 GCLCP48506 637 aaPredicted RBP18.76■□□□□ 0.59
CIT-210ENST00000539413 RGS19P49795 217 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 FCGRTP55899 365 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 IRX3P78415 501 aaPredicted RBP18.76■□□□□ 0.59
CIT-210ENST00000539413 CLEC10AQ8IUN9 316 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 PLEKHM2Q8IWE5 1019 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 STK11IPQ8N1F8 1099 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
CIT-210ENST00000539413 SRRDQ9UH36 339 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 HTTP42858 3142 aa18.76■□□□□ 0.59
CIT-210ENST00000539413 TDO2P48775 406 aa18.75■□□□□ 0.59
CIT-210ENST00000539413 USP14P54578 494 aa18.75■□□□□ 0.59
CIT-210ENST00000539413 PRMT2P55345 433 aa18.75■□□□□ 0.59
CIT-210ENST00000539413 FAM110CQ1W6H9 321 aa18.75■□□□□ 0.59
CIT-210ENST00000539413 CCDC129Q6ZRS4 1044 aa18.75■□□□□ 0.59
CIT-210ENST00000539413 IFNL3Q8IZI9 196 aa18.75■□□□□ 0.59
CIT-210ENST00000539413 ARMC5Q96C12 935 aa18.75■□□□□ 0.59
CIT-210ENST00000539413 CCDC17Q96LX7 622 aa18.75■□□□□ 0.59
CIT-210ENST00000539413 MYPNQ86TC9 1320 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 ROBO3Q96MS0 1386 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 TRIM6-TRIM34B2RNG4 842 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 HOXD10P28358 340 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 HERVK_113P62684 666 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 PRKCZQ05513 592 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 SLC9C1Q4G0N8 1177 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 SIAH1Q8IUQ4 282 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 OSBPL3Q9H4L5 887 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 MYH8P13535 1937 aa18.74■□□□□ 0.59
CIT-210ENST00000539413 PEX10O60683 326 aa18.73■□□□□ 0.59
CIT-210ENST00000539413 VCAM1P19320 739 aa18.73■□□□□ 0.59
CIT-210ENST00000539413 RILPL2Q969X0 211 aa18.73■□□□□ 0.59
CIT-210ENST00000539413 MORF4L1Q9UBU8 362 aa18.73■□□□□ 0.59
CIT-210ENST00000539413 GABRQQ9UN88 632 aa18.73■□□□□ 0.59
CIT-210ENST00000539413 MGAMO43451 1857 aa18.73■□□□□ 0.59
CIT-210ENST00000539413 USP17L15C9J2P7 530 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 USP17L13C9JLJ4 530 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 USP17L11C9JVI0 530 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 USP17L18D6R9N7 530 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 USP17L22D6RA61 530 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 USP17L17D6RBQ6 530 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 USP17L19D6RCP7 530 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 USP17L20D6RJB6 530 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 TNPO2O14787 897 aaKnown RBP18.72■□□□□ 0.59
CIT-210ENST00000539413 FOXP2O15409 715 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 ICA1Q05084 483 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 USP17L24Q0WX57 530 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 SH3TC2Q8TF17 1288 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 FAM227BQ96M60 508 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 NACAP1Q9BZK3 213 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 TXNRD2Q9NNW7 524 aa18.72■□□□□ 0.59
CIT-210ENST00000539413 A0A0D9SFI3 127 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 RASA1P20936 1047 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 KIAA1755Q5JYT7 1200 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 VPS53Q5VIR6 699 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 POTEEQ6S8J3 1075 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 CATSPERGQ6ZRH7 1159 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 RAET1EQ8TD07 263 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 ZNF333Q96JL9 665 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.71■□□□□ 0.59
CIT-210ENST00000539413 NAPBQ9H115 298 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 RPAP3Q9H6T3 665 aaPredicted RBP18.71■□□□□ 0.59
CIT-210ENST00000539413 MKNK2Q9HBH9 465 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 ARHGEF10LQ9HCE6 1279 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 HELLSQ9NRZ9 838 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 RBPJLQ9UBG7 517 aa18.71■□□□□ 0.59
CIT-210ENST00000539413 PDE4AP27815 886 aa18.7■□□□□ 0.58
CIT-210ENST00000539413 MLLT1Q03111 559 aaPredicted RBP18.7■□□□□ 0.58
CIT-210ENST00000539413 NBPF11Q86T75 865 aa18.7■□□□□ 0.58
CIT-210ENST00000539413 TMX2Q9Y320 296 aa18.7■□□□□ 0.58
CIT-210ENST00000539413 POTEFA5A3E0 1075 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 PRDM1O75626 825 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 MYCP01106 439 aaPredicted RBP18.69■□□□□ 0.58
CIT-210ENST00000539413 EEF2P13639 858 aaKnown RBP18.69■□□□□ 0.58
CIT-210ENST00000539413 FLT3LGP49771 235 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 ATP2B2Q01814 1243 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 NMIQ13287 307 aaPredicted RBP18.69■□□□□ 0.58
CIT-210ENST00000539413 MCMDC2Q4G0Z9 681 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 TICAM2Q86XR7 235 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 GPRC5AQ8NFJ5 357 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 COA7Q96BR5 231 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 PAGR1Q9BTK6 254 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 KANSL2Q9H9L4 492 aa18.69■□□□□ 0.58
CIT-210ENST00000539413 SDSP20132 328 aa18.68■□□□□ 0.58
CIT-210ENST00000539413 GRK4P32298 578 aa18.68■□□□□ 0.58
CIT-210ENST00000539413 PPARAQ07869 468 aa18.68■□□□□ 0.58
CIT-210ENST00000539413 Q3C1V9 767 aa18.68■□□□□ 0.58
CIT-210ENST00000539413 GTF3C2Q8WUA4 911 aaPredicted RBP18.68■□□□□ 0.58
CIT-210ENST00000539413 SH2D4AQ9H788 454 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms