RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-210	ENST00000539303		Q6ZS46	218 aa		4.66	□□□□□ -1.66
SNHG1-210	ENST00000539303	PODN	Q7Z5L7	613 aa		4.66	□□□□□ -1.66
SNHG1-210	ENST00000539303	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	4.66	□□□□□ -1.66
SNHG1-210	ENST00000539303	WFDC12	Q8WWY7	111 aa		4.66	□□□□□ -1.66
SNHG1-210	ENST00000539303	LENG1	Q96BZ8	264 aa	Predicted RBP	4.66	□□□□□ -1.66
SNHG1-210	ENST00000539303	SEMA6C	Q9H3T2	930 aa		4.66	□□□□□ -1.66
SNHG1-210	ENST00000539303	NOP53	Q9NZM5	478 aa	Known RBP	4.66	□□□□□ -1.66
SNHG1-210	ENST00000539303	ZNF214	Q9UL59	606 aa	Predicted RBP	4.66	□□□□□ -1.66
SNHG1-210	ENST00000539303	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.66	□□□□□ -1.66
SNHG1-210	ENST00000539303	SBNO2	Q9Y2G9	1366 aa		4.65	□□□□□ -1.66
SNHG1-210	ENST00000539303	COL17A1	Q9UMD9	1497 aa	Predicted RBP	4.65	□□□□□ -1.66
SNHG1-210	ENST00000539303	ESYT3	A0FGR9	886 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	KRBA1	A5PL33	1030 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	RGS13	O14921	159 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	SART1	O43290	800 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	GAS2	O43903	313 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	SUSD5	O60279	629 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	CDK5R2	Q13319	367 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	MBTPS1	Q14703	1052 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	DCAF15	Q66K64	600 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	ARMC10	Q8N2F6	343 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	BEND7	Q8N7W2	519 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	CYB5D2	Q8WUJ1	264 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	FAM46A	Q96IP4	442 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	MIPEP	Q99797	713 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	FOXQ1	Q9C009	403 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	PHAX	Q9H814	394 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	SUSD2	Q9UGT4	822 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	ZMYM5	Q9UJ78	669 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	KDM2B	Q8NHM5	1336 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	CNTNAP4	Q9C0A0	1308 aa		4.65	□□□□□ -1.67
SNHG1-210	ENST00000539303	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	SLITRK5	O94991	958 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	GBP1	P32455	592 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	CAP2	P40123	477 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	CHRNA4	P43681	627 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	USP11	P51784	963 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	SLC7A5	Q01650	507 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	NRG1	Q02297	640 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	IFRD2	Q12894	506 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	ADGRE1	Q14246	886 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	SLC10A6	Q3KNW5	377 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	LRP10	Q7Z4F1	713 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	CDH24	Q86UP0	819 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	SHISA5	Q8N114	240 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	DNAJB8	Q8NHS0	232 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	CCDC74B	Q96LY2	380 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	FANCL	Q9NW38	375 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	SUCO	Q9UBS9	1254 aa	Known RBP	4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	APEX2	Q9UBZ4	518 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	PCOLCE2	Q9UKZ9	415 aa		4.64	□□□□□ -1.67
SNHG1-210	ENST00000539303	ANKRD62	A6NC57	917 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	PIK3R2	O00459	728 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	SHOX	O15266	292 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	CBFA2T2	O43439	604 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	LEFTY1	O75610	366 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	LRIG2	O94898	1065 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	EPHX1	P07099	455 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	FAM153B	P0C7A2	387 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	BMP3	P12645	472 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	PMS1	P54277	932 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	CHMP4BP1	P59074	171 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	SSRP1	Q08945	709 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	TKFC	Q3LXA3	575 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	FOXB2	Q5VYV0	432 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	SEZ6L2	Q6UXD5	910 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	KCT2	Q8NC54	265 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	FGD4	Q96M96	766 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	PSMG3-AS1	Q96PY0	264 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	CEP41	Q9BYV8	373 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	C1GALT1	Q9NS00	363 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	SLC12A7	Q9Y666	1083 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	PTCH2	Q9Y6C5	1203 aa		4.63	□□□□□ -1.67
SNHG1-210	ENST00000539303	C9orf172	C9J069	976 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	ENPP3	O14638	875 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	TBX1	O43435	398 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	ADCY3	O60266	1144 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	LRRN2	O75325	713 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	CLEC3A	O75596	197 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	APBA3	O96018	575 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	MAP4	P27816	1152 aa	Known RBP	4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	RXRB	P28702	533 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	SNW1	Q13573	536 aa	Known RBP	4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	NCAPH	Q15003	741 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	C2orf27A	Q580R0	203 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	LETMD1	Q6P1Q0	360 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	EEPD1	Q7L9B9	569 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	DZIP1L	Q8IYY4	767 aa	Known RBP	4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	TOP6BL	Q8N6T0	577 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	EZH1	Q92800	747 aa	Predicted RBP	4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	UTP4	Q969X6	686 aa	Known RBP	4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	VWCE	Q96DN2	955 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	MYRFL	Q96LU7	910 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	HAUS7	Q99871	368 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	MKRN2	Q9H000	416 aa	Known RBP	4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	ZNF451	Q9Y4E5	1061 aa		4.62	□□□□□ -1.67
SNHG1-210	ENST00000539303	CDC45	O75419	566 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	HSD3B2	P26439	372 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms