RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 RHBDL3P58872 404 aa23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 ZNF444Q8N0Y2 327 aaPredicted RBP23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 PHF20Q9BVI0 1012 aa23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 TMX4Q9H1E5 349 aaPredicted RBP23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 ZNF287Q9HBT7 754 aa23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 IL17RBQ9NRM6 502 aa23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 NOL7Q9UMY1 257 aaKnown RBP23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 FLT1P17948 1338 aa23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 KIF5BP33176 963 aa23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 ZNF165P49910 485 aa23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 TOB1P50616 345 aaPredicted RBP23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 PLCD1P51178 756 aa23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 DPP8Q6V1X1 898 aaPredicted RBP23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 LUZP1Q86V48 1076 aa23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 SRBD1Q8N5C6 995 aaKnown RBP23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 SDF4Q9BRK5 362 aa23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 VPS54Q9P1Q0 977 aa23.76■■□□□ 1.39
SMPDL3A-203ENST00000539041 ZNF202O95125 648 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 TSPY3P0CV98 308 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 TSPY8P0CW00 308 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 KRT2P35908 639 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 NR5A1Q13285 461 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 MSL1Q68DK7 614 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 OXER1Q8TDS5 423 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 SHISA4Q96DD7 197 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 SNED1Q8TER0 1413 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 FAM237AA0A1B0GTK4 181 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 PLCB2Q00722 1185 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 DAGLAQ9Y4D2 1042 aa23.75■■□□□ 1.39
SMPDL3A-203ENST00000539041 AP5Z1O43299 807 aa23.74■■□□□ 1.39
SMPDL3A-203ENST00000539041 RASA1P20936 1047 aa23.74■■□□□ 1.39
SMPDL3A-203ENST00000539041 OLFM4Q6UX06 510 aa23.74■■□□□ 1.39
SMPDL3A-203ENST00000539041 C16orf86Q6ZW13 317 aa23.74■■□□□ 1.39
SMPDL3A-203ENST00000539041 SLC44A5Q8NCS7 719 aa23.74■■□□□ 1.39
SMPDL3A-203ENST00000539041 FBXW7Q969H0 707 aa23.74■■□□□ 1.39
SMPDL3A-203ENST00000539041 TIGD1Q96MW7 591 aa23.74■■□□□ 1.39
SMPDL3A-203ENST00000539041 ANO10Q9NW15 660 aa23.74■■□□□ 1.39
SMPDL3A-203ENST00000539041 HPSEQ9Y251 543 aa23.74■■□□□ 1.39
SMPDL3A-203ENST00000539041 hCG_1642624A0A1W2PR95 340 aa23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 RESP18Q5W5W9 173 aa23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 SHC4Q6S5L8 630 aa23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 PNMA1Q8ND90 353 aa23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 EYA3Q99504 573 aa23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 BRMS1Q9HCU9 246 aa23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 ZKSCAN5Q9Y2L8 839 aa23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 CDK8P49336 464 aa23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 KRI1Q8N9T8 703 aaKnown RBP23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 CEP131Q9UPN4 1083 aa23.73■■□□□ 1.39
SMPDL3A-203ENST00000539041 USP17L3A6NCW0 530 aa23.72■■□□□ 1.39
SMPDL3A-203ENST00000539041 USP17L4A6NCW7 530 aa23.72■■□□□ 1.39
SMPDL3A-203ENST00000539041 SYKP43405 635 aa23.72■■□□□ 1.39
SMPDL3A-203ENST00000539041 GRM4Q14833 912 aa23.72■■□□□ 1.39
SMPDL3A-203ENST00000539041 C11orf57Q6ZUT1 292 aaPredicted RBP23.72■■□□□ 1.39
SMPDL3A-203ENST00000539041 USP17L1Q7RTZ2 530 aa23.72■■□□□ 1.39
SMPDL3A-203ENST00000539041 C2CD5Q86YS7 1000 aa23.72■■□□□ 1.39
SMPDL3A-203ENST00000539041 ZNF622Q969S3 477 aaKnown RBP eCLIP23.72■■□□□ 1.39
SMPDL3A-203ENST00000539041 SCG2P13521 617 aa23.71■■□□□ 1.39
SMPDL3A-203ENST00000539041 CLIC6Q96NY7 704 aa23.71■■□□□ 1.39
SMPDL3A-203ENST00000539041 CABP5Q9NP86 173 aa23.71■■□□□ 1.39
SMPDL3A-203ENST00000539041 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.71■■□□□ 1.39
SMPDL3A-203ENST00000539041 KIAA1468Q9P260 1216 aa23.71■■□□□ 1.39
SMPDL3A-203ENST00000539041 SCN9AQ15858 1988 aa23.71■■□□□ 1.39
SMPDL3A-203ENST00000539041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.7■■□□□ 1.39
SMPDL3A-203ENST00000539041 PFKFB3Q16875 520 aaPredicted RBP23.7■■□□□ 1.39
SMPDL3A-203ENST00000539041 DOK7Q18PE1 504 aa23.7■■□□□ 1.39
SMPDL3A-203ENST00000539041 STYK1Q6J9G0 422 aa23.7■■□□□ 1.39
SMPDL3A-203ENST00000539041 CERS5Q8N5B7 392 aa23.7■■□□□ 1.39
SMPDL3A-203ENST00000539041 PCDHB6Q9Y5E3 794 aa23.7■■□□□ 1.39
SMPDL3A-203ENST00000539041 G3V3G9 751 aa23.7■■□□□ 1.38
SMPDL3A-203ENST00000539041 GNAQP50148 359 aa23.7■■□□□ 1.38
SMPDL3A-203ENST00000539041 IQCB1Q15051 598 aa23.7■■□□□ 1.38
SMPDL3A-203ENST00000539041 DCAF8Q5TAQ9 597 aa23.7■■□□□ 1.38
SMPDL3A-203ENST00000539041 PTPREP23469 700 aa23.69■■□□□ 1.38
SMPDL3A-203ENST00000539041 FBXO2Q9UK22 296 aaPredicted RBP23.69■■□□□ 1.38
SMPDL3A-203ENST00000539041 TTF2Q9UNY4 1162 aaKnown RBP23.69■■□□□ 1.38
SMPDL3A-203ENST00000539041 MORC2Q9Y6X9 1032 aaPredicted RBP23.69■■□□□ 1.38
SMPDL3A-203ENST00000539041 H0YIN7 160 aa23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 CEP57L1Q8IYX8 460 aa23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 NEDD1Q8NHV4 660 aa23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 ERCC4Q92889 916 aaPredicted RBP23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 MYH4Q9Y623 1939 aa23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 F8W031 263 aaPredicted RBP23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 NPY5RQ15761 445 aa23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 TNFRSF25Q93038 417 aa23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 TMEM47Q9BQJ4 181 aa23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 MAD2L2Q9UI95 211 aa23.68■■□□□ 1.38
SMPDL3A-203ENST00000539041 PSME4Q14997 1843 aa23.67■■□□□ 1.38
SMPDL3A-203ENST00000539041 GOLGA6L19H0YKK7 550 aa23.67■■□□□ 1.38
SMPDL3A-203ENST00000539041 ZRSR1Q15695 479 aaKnown RBP23.67■■□□□ 1.38
SMPDL3A-203ENST00000539041 SLC15A2Q16348 729 aa23.67■■□□□ 1.38
SMPDL3A-203ENST00000539041 NAT10Q9H0A0 1025 aaKnown RBP23.67■■□□□ 1.38
SMPDL3A-203ENST00000539041 FAM205CA6NFA0 338 aa23.66■■□□□ 1.38
SMPDL3A-203ENST00000539041 TRIM75PA6NK02 468 aa23.66■■□□□ 1.38
SMPDL3A-203ENST00000539041 STAG2Q8N3U4 1231 aa23.66■■□□□ 1.38
SMPDL3A-203ENST00000539041 ZNF579Q8NAF0 562 aaKnown RBP23.66■■□□□ 1.38
SMPDL3A-203ENST00000539041 ANO8Q9HCE9 1232 aaPredicted RBP23.66■■□□□ 1.38
SMPDL3A-203ENST00000539041 FAM13BQ9NYF5 915 aa23.66■■□□□ 1.38
SMPDL3A-203ENST00000539041 STX8Q9UNK0 236 aa23.66■■□□□ 1.38
SMPDL3A-203ENST00000539041 SRPRBQ9Y5M8 271 aaKnown RBP23.66■■□□□ 1.38
SMPDL3A-203ENST00000539041 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms