RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 SMC3Q9UQE7 1217 aa6.9□□□□□ -1.3
KNTC1-210ENST00000539013 WDR17Q8IZU2 1322 aa6.9□□□□□ -1.3
KNTC1-210ENST00000539013 MED23Q9ULK4 1368 aa6.9□□□□□ -1.31
KNTC1-210ENST00000539013 GLI3P10071 1580 aa6.9□□□□□ -1.31
KNTC1-210ENST00000539013 STRCP1A6NGW2 1772 aa6.9□□□□□ -1.31
KNTC1-210ENST00000539013 SPDYE3A6NKU9 549 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 STX6O43752 255 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 ZSCAN22P10073 491 aaPredicted RBP6.89□□□□□ -1.31
KNTC1-210ENST00000539013 CASTP20810 708 aaKnown RBP6.89□□□□□ -1.31
KNTC1-210ENST00000539013 RFX5P48382 616 aaPredicted RBP6.89□□□□□ -1.31
KNTC1-210ENST00000539013 PCBP4P57723 403 aaKnown RBP6.89□□□□□ -1.31
KNTC1-210ENST00000539013 PTPN12Q05209 780 aaKnown RBP6.89□□□□□ -1.31
KNTC1-210ENST00000539013 PDE4CQ08493 712 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 CREB3L3Q68CJ9 461 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 LRRC69Q6ZNQ3 347 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 ZCRB1Q8TBF4 217 aaKnown RBP6.89□□□□□ -1.31
KNTC1-210ENST00000539013 GPT2Q8TD30 523 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 JAKMIP1Q96N16 626 aaKnown RBP6.89□□□□□ -1.31
KNTC1-210ENST00000539013 ARXQ96QS3 562 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 HINFPQ9BQA5 517 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 STRN4Q9NRL3 753 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 PDRG1Q9NUG6 133 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 RBM8AQ9Y5S9 174 aaKnown RBP6.89□□□□□ -1.31
KNTC1-210ENST00000539013 USP16Q9Y5T5 823 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 RPAP1Q9BWH6 1393 aaPredicted RBP6.89□□□□□ -1.31
KNTC1-210ENST00000539013 ARFGEF2Q9Y6D5 1785 aa6.89□□□□□ -1.31
KNTC1-210ENST00000539013 UBR2Q8IWV8 1755 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 PAPPAQ13219 1627 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 TNS2Q63HR2 1409 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 A0A087WZG4 1122 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 ADARB2-AS1A8MUL3 147 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 C1QTNF9BB2RNN3 333 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L15C9J2P7 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L10C9JJH3 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L13C9JLJ4 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L12C9JPN9 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L11C9JVI0 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L21D6R901 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L18D6R9N7 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L22D6RA61 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L17D6RBQ6 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L19D6RCP7 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L20D6RJB6 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 SLC27A2O14975 620 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 F13A1P00488 732 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 PDCP20941 246 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 KCNJ4P48050 445 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 CASP7P55210 303 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 CLDN10P78369 228 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 PTH1RQ03431 593 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USP17L24Q0WX57 530 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 NMIQ13287 307 aaPredicted RBP6.88□□□□□ -1.31
KNTC1-210ENST00000539013 TNNI3KQ59H18 835 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 USPL1Q5W0Q7 1092 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 PRPF40BQ6NWY9 871 aaKnown RBP6.88□□□□□ -1.31
KNTC1-210ENST00000539013 BLOC1S2Q6QNY1 142 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 SYT9Q86SS6 491 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 ANKMY2Q8IV38 441 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 SIX5Q8N196 739 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 FAM184AQ8NB25 1140 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 CCDC191Q8NCU4 936 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 TNFRSF25Q93038 417 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 PDLIM2Q96JY6 352 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 MDFIQ99750 246 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 FSD1Q9BTV5 496 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 TEX13AQ9BXU3 409 aaPredicted RBP6.88□□□□□ -1.31
KNTC1-210ENST00000539013 CCDC8Q9H0W5 538 aaPredicted RBP6.88□□□□□ -1.31
KNTC1-210ENST00000539013 RRAGDQ9NQL2 400 aaPredicted RBP6.88□□□□□ -1.31
KNTC1-210ENST00000539013 TMEM63CQ9P1W3 806 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 FPGT-TNNI3KV9GXZ4 949 aa6.88□□□□□ -1.31
KNTC1-210ENST00000539013 COL5A2P05997 1499 aaPredicted RBP6.87□□□□□ -1.31
KNTC1-210ENST00000539013 PALLDQ8WX93 1383 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.87□□□□□ -1.31
KNTC1-210ENST00000539013 SPATA31C1P0DKV0 1188 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 IL2RBP14784 551 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 SYT1P21579 422 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 IL15P40933 162 aaPredicted RBP6.87□□□□□ -1.31
KNTC1-210ENST00000539013 KCNQ4P56696 695 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 UBE2HP62256 183 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 CHRNA2Q15822 529 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 HIF1AQ16665 826 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 UVSSAQ2YD98 709 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 EPHA10Q5JZY3 1008 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 BRINP3Q76B58 766 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 NOL8Q76FK4 1167 aaKnown RBP6.87□□□□□ -1.31
KNTC1-210ENST00000539013 UBE3BQ7Z3V4 1068 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 CD163Q86VB7 1156 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 STAG2Q8N3U4 1231 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.87□□□□□ -1.31
KNTC1-210ENST00000539013 SIL1Q9H173 461 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 BOLA2Q9H3K6 86 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 TSPY26PQ9H489 355 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 PRDM11Q9NQV5 511 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 CWC25Q9NXE8 425 aaPredicted RBP6.87□□□□□ -1.31
KNTC1-210ENST00000539013 KIAA1024Q9UPX6 916 aa6.87□□□□□ -1.31
KNTC1-210ENST00000539013 AFDNP55196 1824 aaKnown RBP6.87□□□□□ -1.31
KNTC1-210ENST00000539013 KCPQ6ZWJ8 1503 aa6.86□□□□□ -1.31
KNTC1-210ENST00000539013 SH3TC1Q8TE82 1336 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms