RNA–Protein interactions for RNA: ENST00000538708.5

PTPRB-204, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-204ENST00000538708 NOC4LQ9BVI4 516 aaKnown RBP10.58□□□□□ -0.72
PTPRB-204ENST00000538708 TEKT3Q9BXF9 490 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 PNMA6EA0A0J9YXQ4 647 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 SHTN1A0MZ66 631 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 E7EVH7 732 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 Q3C1V9 767 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 DYMQ7RTS9 669 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 DACT1Q9NYF0 836 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 ELP1O95163 1332 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 ATP10DQ9P241 1426 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 SEMA3EO15041 775 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 PPP1R2P41236 205 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 SPICE1Q8N0Z3 855 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 ADPGKQ9BRR6 497 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 SUGCTQ9HAC7 445 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 NCOA5Q9HCD5 579 aaKnown RBP10.58□□□□□ -0.72
PTPRB-204ENST00000538708 NRBP2Q9NSY0 501 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 KCNG1Q9UIX4 513 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 IFRD2Q12894 506 aaPredicted RBP10.58□□□□□ -0.72
PTPRB-204ENST00000538708 MIGA2Q7L4E1 593 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 CABP7Q86V35 215 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 PHKBQ93100 1093 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 PAIP2Q9BPZ3 127 aaKnown RBP10.58□□□□□ -0.72
PTPRB-204ENST00000538708 PTPRTO14522 1441 aa10.58□□□□□ -0.72
PTPRB-204ENST00000538708 XKR9Q5GH70 373 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 CC2D2BQ6DHV5 1058 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
PTPRB-204ENST00000538708 STK10O94804 968 aaKnown RBP10.57□□□□□ -0.72
PTPRB-204ENST00000538708 SLU7O95391 586 aaKnown RBP10.57□□□□□ -0.72
PTPRB-204ENST00000538708 GOLGA8HP0CJ92 632 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 KRT83P78385 493 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 PPP2R5BQ15173 497 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 SEL1L2Q5TEA6 688 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 IFNL3Q8IZI9 196 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 GJD4Q96KN9 370 aaPredicted RBP10.57□□□□□ -0.72
PTPRB-204ENST00000538708 CCDC42Q96M95 316 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 RPS6KC1Q96S38 1066 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 MYOM2P54296 1465 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 TNNI1P19237 187 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 APOL6Q9BWW8 343 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 DNAJC25Q9H1X3 360 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 AKT3Q9Y243 479 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 EXOC3O60645 756 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 GNG11P61952 73 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 GRAPQ13588 217 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 CCDC125Q86Z20 511 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 GRAPLQ8TC17 118 aaPredicted RBP10.57□□□□□ -0.72
PTPRB-204ENST00000538708 KIAA1524Q8TCG1 905 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 PIGBQ92521 554 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 SEC31BQ9NQW1 1179 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 CCND2P30279 289 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 LIG4P49917 911 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 POLGP54098 1239 aaPredicted RBP10.57□□□□□ -0.72
PTPRB-204ENST00000538708 PPP1R7Q15435 360 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 MCTP2Q6DN12 878 aa10.57□□□□□ -0.72
PTPRB-204ENST00000538708 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPRB-204ENST00000538708 USP6P35125 1406 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 ATP2A2P16615 1042 aaKnown RBP10.56□□□□□ -0.72
PTPRB-204ENST00000538708 HSPA1LP34931 641 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 YWHAEP62258 255 aaKnown RBP10.56□□□□□ -0.72
PTPRB-204ENST00000538708 SPON1Q9HCB6 807 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 PNMA3Q9UL41 463 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 KCNJ14Q9UNX9 436 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 PPM1EQ8WY54 764 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 FAM204AQ9H8W3 233 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 VPS54Q9P1Q0 977 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 KDM3AQ9Y4C1 1321 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 PREX2Q70Z35 1606 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 HSF2BPO75031 334 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 TNNC2P02585 160 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 MYL3P08590 195 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 CD19P15391 556 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 ZSCAN23Q3MJ62 389 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 HERC4Q5GLZ8 1057 aaPredicted RBP10.56□□□□□ -0.72
PTPRB-204ENST00000538708 DIS3L2Q8IYB7 885 aaKnown RBP10.56□□□□□ -0.72
PTPRB-204ENST00000538708 C16orf45Q96MC5 204 aaPredicted RBP10.56□□□□□ -0.72
PTPRB-204ENST00000538708 SPATA31A3Q5VYP0 1347 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 ATP7BP35670 1465 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 ATP5JP18859 108 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 ASIC2Q16515 512 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 TBC1D10BQ4KMP7 808 aaPredicted RBP10.56□□□□□ -0.72
PTPRB-204ENST00000538708 SLC27A3Q5K4L6 730 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 CTR9Q6PD62 1173 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 MMS19Q96T76 1030 aa10.56□□□□□ -0.72
PTPRB-204ENST00000538708 ADD3Q9UEY8 706 aaKnown RBP10.56□□□□□ -0.72
PTPRB-204ENST00000538708 TFDP1Q14186 410 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 PLA2G4DQ86XP0 818 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 CEP112Q8N8E3 955 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 GPR101Q96P66 508 aaPredicted RBP10.55□□□□□ -0.72
PTPRB-204ENST00000538708 PPP1R21Q6ZMI0 780 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 NELFCDQ8IXH7 590 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 CEP63Q96MT8 703 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 DSCC1Q9BVC3 393 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 E7EWF7 191 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 CETN3O15182 167 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 CRCPO75575 148 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 OATP04181 439 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 KIF5AQ12840 1032 aa10.55□□□□□ -0.72
PTPRB-204ENST00000538708 LEO1Q8WVC0 666 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms