RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 GDF6Q6KF10 455 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-208ENST00000538266 ILDR2Q71H61 639 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 MCM10Q7L590 875 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 OSMRQ99650 979 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 PBX4Q9BYU1 374 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 RASSF4Q9H2L5 321 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 PRDM6Q9NQX0 595 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 DZANK1Q9NVP4 752 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 SUPT16HQ9Y5B9 1047 aaKnown RBP5.58□□□□□ -1.52
SNHG1-208ENST00000538266 MRC1P22897 1456 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 VIRMAQ69YN4 1812 aaKnown RBP5.58□□□□□ -1.52
SNHG1-208ENST00000538266 SBF2Q86WG5 1849 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 ADAMTS7Q9UKP4 1686 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 PIK3R2O00459 728 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 ACPPP15309 386 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 BAG6P46379 1132 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 ATP11AP98196 1134 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 TRAPPC3LQ5T215 181 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 GALNT12Q8IXK2 581 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 TTC5Q8N0Z6 440 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 SMARCC1Q92922 1105 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-208ENST00000538266 CCDC74AQ96AQ1 378 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 POP1Q99575 1024 aaKnown RBP5.57□□□□□ -1.52
SNHG1-208ENST00000538266 SLC52A2Q9HAB3 445 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 LATS2Q9NRM7 1088 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 BTAF1O14981 1849 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 ITGB4P16144 1822 aa5.57□□□□□ -1.52
SNHG1-208ENST00000538266 TNS1Q9HBL0 1735 aaKnown RBP5.57□□□□□ -1.52
SNHG1-208ENST00000538266 CEMIPQ8WUJ3 1361 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 PNMA6FA0A0J9YX94 578 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 BTBD11A6QL63 1104 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 NFKBIEO00221 500 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 GNB5O14775 395 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 KCNQ2O43526 872 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 APBA3O96018 575 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 HNRNPUQ00839 825 aaKnown RBP eCLIP5.56□□□□□ -1.52
SNHG1-208ENST00000538266 COL9A3Q14050 684 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-208ENST00000538266 DCTN1Q14203 1278 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 TAF7Q15545 349 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-208ENST00000538266 GRIK5Q16478 980 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 PEAR1Q5VY43 1037 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-208ENST00000538266 DNAJC14Q6Y2X3 702 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-208ENST00000538266 DMRTC2Q8IXT2 367 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-208ENST00000538266 IL22RA1Q8N6P7 574 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 IL17REQ8NFR9 667 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 EPS8L3Q8TE67 593 aaKnown RBP5.56□□□□□ -1.52
SNHG1-208ENST00000538266 PIGBQ92521 554 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 NXPE3Q969Y0 559 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 ZKSCAN3Q9BRR0 538 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 THUMPD2Q9BTF0 503 aaKnown RBP5.56□□□□□ -1.52
SNHG1-208ENST00000538266 PLVAPQ9BX97 442 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 LGR6Q9HBX8 967 aa5.56□□□□□ -1.52
SNHG1-208ENST00000538266 LAS1LQ9Y4W2 734 aaKnown RBP5.56□□□□□ -1.52
SNHG1-208ENST00000538266 PALLDQ8WX93 1383 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 A0A1W2PP55 124 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 PDE2AO00408 941 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-208ENST00000538266 NID1P14543 1247 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 ERCC3P19447 782 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 HMGB2P26583 209 aaKnown RBP5.55□□□□□ -1.52
SNHG1-208ENST00000538266 MFAP1P55081 439 aaKnown RBP5.55□□□□□ -1.52
SNHG1-208ENST00000538266 FMR1Q06787 632 aaKnown RBP eCLIP5.55□□□□□ -1.52
SNHG1-208ENST00000538266 ENOX2Q16206 610 aaKnown RBP5.55□□□□□ -1.52
SNHG1-208ENST00000538266 KIAA0319Q5VV43 1072 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 MSL1Q68DK7 614 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 LACRTQ9GZZ8 138 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 TSPYL4Q9UJ04 414 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 WWC3Q9ULE0 1092 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 TRIM33Q9UPN9 1127 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 RGPD3A6NKT7 1758 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-208ENST00000538266 SIPA1L3O60292 1781 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-208ENST00000538266 RGPD4Q7Z3J3 1758 aa5.55□□□□□ -1.52
SNHG1-208ENST00000538266 FAM177BA6PVY3 158 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 GADD45BO75293 160 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-208ENST00000538266 P4HBP07237 508 aaKnown RBP5.54□□□□□ -1.52
SNHG1-208ENST00000538266 IRS1P35568 1242 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 GNAI1P63096 354 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 ATP2B2Q01814 1243 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 COL19A1Q14993 1142 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 EAPPQ56P03 285 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-208ENST00000538266 ZNF790Q6PG37 636 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 PTF1AQ7RTS3 328 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 WFDC8Q8IUA0 241 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 WDR63Q8IWG1 891 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 CACTIN-AS1Q8N1I8 211 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 TMEM102Q8N9M5 508 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-208ENST00000538266 TRIM11Q96F44 468 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 HHIPQ96QV1 700 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 EHD4Q9H223 541 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 SUV39H2Q9H5I1 410 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 MYH16Q9H6N6 1097 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 NPHS2Q9NP85 383 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 SH2B1Q9NRF2 756 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-208ENST00000538266 IFT57Q9NWB7 429 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 PPP4R2Q9NY27 417 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 CCNL1Q9UK58 526 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-208ENST00000538266 ASAP1Q9ULH1 1129 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 PAPPAQ13219 1627 aa5.54□□□□□ -1.52
SNHG1-208ENST00000538266 IL16Q14005 1332 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 SPDYE3A6NKU9 549 aa5.53□□□□□ -1.52
SNHG1-208ENST00000538266 PLSCR1O15162 318 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms