RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SNX21Q969T3 373 aa6.01□□□□□ -1.45
LRP6-203ENST00000538239 TLR7Q9NYK1 1049 aaKnown RBP6.01□□□□□ -1.45
LRP6-203ENST00000538239 CLASP1Q7Z460 1538 aa6□□□□□ -1.45
LRP6-203ENST00000538239 SPHKAPQ2M3C7 1700 aa6□□□□□ -1.45
LRP6-203ENST00000538239 GOLGA6L10A0A0M3HER8 536 aa6□□□□□ -1.45
LRP6-203ENST00000538239 PRPF6O94906 941 aaKnown RBP6□□□□□ -1.45
LRP6-203ENST00000538239 MCM3P25205 808 aa6□□□□□ -1.45
LRP6-203ENST00000538239 HLFQ16534 295 aa6□□□□□ -1.45
LRP6-203ENST00000538239 TMC4Q7Z404 712 aa6□□□□□ -1.45
LRP6-203ENST00000538239 GOLGA1Q92805 767 aa6□□□□□ -1.45
LRP6-203ENST00000538239 PLCD4Q9BRC7 762 aa6□□□□□ -1.45
LRP6-203ENST00000538239 NOC4LQ9BVI4 516 aaKnown RBP6□□□□□ -1.45
LRP6-203ENST00000538239 ZMYND15Q9H091 742 aa6□□□□□ -1.45
LRP6-203ENST00000538239 AOC3Q16853 763 aa6□□□□□ -1.45
LRP6-203ENST00000538239 TBC1D9BQ66K14 1250 aa6□□□□□ -1.45
LRP6-203ENST00000538239 SEPT14Q6ZU15 432 aa6□□□□□ -1.45
LRP6-203ENST00000538239 PNMA1Q8ND90 353 aa6□□□□□ -1.45
LRP6-203ENST00000538239 SELENOOQ9BVL4 669 aa6□□□□□ -1.45
LRP6-203ENST00000538239 RNF181Q9P0P0 153 aa6□□□□□ -1.45
LRP6-203ENST00000538239 STK24Q9Y6E0 443 aa6□□□□□ -1.45
LRP6-203ENST00000538239 FSD2A1L4K1 749 aa6□□□□□ -1.45
LRP6-203ENST00000538239 M0R2C6 588 aa6□□□□□ -1.45
LRP6-203ENST00000538239 STX10O60499 249 aa6□□□□□ -1.45
LRP6-203ENST00000538239 SYT1P21579 422 aa6□□□□□ -1.45
LRP6-203ENST00000538239 TBC1D10BQ4KMP7 808 aaPredicted RBP6□□□□□ -1.45
LRP6-203ENST00000538239 MCF2L2Q86YR7 1114 aa6□□□□□ -1.45
LRP6-203ENST00000538239 ATG3Q9NT62 314 aa6□□□□□ -1.45
LRP6-203ENST00000538239 ABCC4O15439 1325 aa6□□□□□ -1.45
LRP6-203ENST00000538239 ALKQ9UM73 1620 aa6□□□□□ -1.45
LRP6-203ENST00000538239 JAK2O60674 1132 aa6□□□□□ -1.45
LRP6-203ENST00000538239 RPS6KA4O75676 772 aa6□□□□□ -1.45
LRP6-203ENST00000538239 TYRO3Q06418 890 aa6□□□□□ -1.45
LRP6-203ENST00000538239 KCTD2Q14681 263 aa6□□□□□ -1.45
LRP6-203ENST00000538239 KRT40Q6A162 431 aa6□□□□□ -1.45
LRP6-203ENST00000538239 GPIHBP1Q8IV16 184 aa6□□□□□ -1.45
LRP6-203ENST00000538239 EHBP1Q8NDI1 1231 aa6□□□□□ -1.45
LRP6-203ENST00000538239 AXIN2Q9Y2T1 843 aa6□□□□□ -1.45
LRP6-203ENST00000538239 ATP10DQ9P241 1426 aa6□□□□□ -1.45
LRP6-203ENST00000538239 KCNQ2O43526 872 aa6□□□□□ -1.45
LRP6-203ENST00000538239 IREB2P48200 963 aaKnown RBP6□□□□□ -1.45
LRP6-203ENST00000538239 ARHGEF6Q15052 776 aa6□□□□□ -1.45
LRP6-203ENST00000538239 KLHL40Q2TBA0 621 aa6□□□□□ -1.45
LRP6-203ENST00000538239 DEPTORQ8TB45 409 aa6□□□□□ -1.45
LRP6-203ENST00000538239 KIFAP3Q92845 792 aa6□□□□□ -1.45
LRP6-203ENST00000538239 SPATA31E1Q6ZUB1 1445 aa6□□□□□ -1.45
LRP6-203ENST00000538239 ESPNB1AK53 854 aa6□□□□□ -1.45
LRP6-203ENST00000538239 ERVV-1B6SEH8 477 aa6□□□□□ -1.45
LRP6-203ENST00000538239 KLRF2D3W0D1 207 aa6□□□□□ -1.45
LRP6-203ENST00000538239 Q3C1V9 767 aa6□□□□□ -1.45
LRP6-203ENST00000538239 HERC4Q5GLZ8 1057 aaPredicted RBP6□□□□□ -1.45
LRP6-203ENST00000538239 SESTD1Q86VW0 696 aa6□□□□□ -1.45
LRP6-203ENST00000538239 ZSCAN30Q86W11 494 aa6□□□□□ -1.45
LRP6-203ENST00000538239 SLC10A4Q96EP9 437 aa6□□□□□ -1.45
LRP6-203ENST00000538239 LLPHQ9BRT6 129 aaKnown RBP6□□□□□ -1.45
LRP6-203ENST00000538239 BLZF1Q9H2G9 400 aa6□□□□□ -1.45
LRP6-203ENST00000538239 TNKSO95271 1327 aa6□□□□□ -1.45
LRP6-203ENST00000538239 GOLGA6L7A0A1B0GV03 622 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 SEMA3EO15041 775 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 PTH1RQ03431 593 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 R3HDM1Q15032 1099 aaKnown RBP5.99□□□□□ -1.45
LRP6-203ENST00000538239 RDH13Q8NBN7 331 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 FAM200AQ8TCP9 573 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 SUGCTQ9HAC7 445 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 RTEL1Q9NZ71 1219 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 KCNH3Q9ULD8 1083 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 GLI2P10070 1586 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 PALM3A6NDB9 673 aaPredicted RBP5.99□□□□□ -1.45
LRP6-203ENST00000538239 CIAO1O76071 339 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 HSPD1P10809 573 aaKnown RBP5.99□□□□□ -1.45
LRP6-203ENST00000538239 TECP42680 631 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 CCNA1P78396 465 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 SMIM5Q71RC9 77 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 HACE1Q8IYU2 909 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 SSH3Q8TE77 659 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 CCDC42Q96M95 316 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 FAM193BQ96PV7 902 aaPredicted RBP5.99□□□□□ -1.45
LRP6-203ENST00000538239 ZNF277Q9NRM2 450 aaPredicted RBP5.99□□□□□ -1.45
LRP6-203ENST00000538239 ATP8A2Q9NTI2 1148 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 AGTPBP1Q9UPW5 1226 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 CC2D2BQ6DHV5 1058 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 FAM173BQ6P4H8 233 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 VPS16Q9H269 839 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 COL15A1P39059 1388 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 JCADQ9P266 1359 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 GOLGA6L9A6NEM1 432 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 SLC16A2P36021 539 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 PRPHP41219 470 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 UVSSAQ2YD98 709 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 XKR9Q5GH70 373 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 PPP1R14CQ8TAE6 165 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 STAMQ92783 540 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 MED10Q9BTT4 135 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 IFNKQ9P0W0 207 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 SWAP70Q9UH65 585 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 ADGRB3O60242 1522 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 DAPK3O43293 454 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 CAVIN2O95810 425 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 USP14P54578 494 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 MTERF4Q7Z6M4 381 aaKnown RBP5.99□□□□□ -1.45
LRP6-203ENST00000538239 CAPZA3Q96KX2 299 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms