RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 PRMT2P55345 433 aa17.75■□□□□ 0.43
USP28-204ENST00000537642 FCGRTP55899 365 aa17.75■□□□□ 0.43
USP28-204ENST00000537642 ZYXQ15942 572 aaKnown RBP17.75■□□□□ 0.43
USP28-204ENST00000537642 FAM110CQ1W6H9 321 aa17.75■□□□□ 0.43
USP28-204ENST00000537642 ZMYM1Q5SVZ6 1142 aa17.75■□□□□ 0.43
USP28-204ENST00000537642 GIMAP6Q6P9H5 292 aa17.75■□□□□ 0.43
USP28-204ENST00000537642 C16orf86Q6ZW13 317 aa17.75■□□□□ 0.43
USP28-204ENST00000537642 C12orf42Q96LP6 360 aa17.75■□□□□ 0.43
USP28-204ENST00000537642 FEZ1Q99689 392 aa17.75■□□□□ 0.43
USP28-204ENST00000537642 KIAA1683Q9H0B3 1180 aa17.75■□□□□ 0.43
USP28-204ENST00000537642 EPB41L4AQ9HCS5 686 aaPredicted RBP17.75■□□□□ 0.43
USP28-204ENST00000537642 ARPP21Q9UBL0 812 aaPredicted RBP17.75■□□□□ 0.43
USP28-204ENST00000537642 KIAA0100Q14667 2235 aaKnown RBP17.74■□□□□ 0.43
USP28-204ENST00000537642 AKR1B1P15121 316 aa17.74■□□□□ 0.43
USP28-204ENST00000537642 HOXD10P28358 340 aa17.74■□□□□ 0.43
USP28-204ENST00000537642 IRX3P78415 501 aaPredicted RBP17.74■□□□□ 0.43
USP28-204ENST00000537642 SLC9C1Q4G0N8 1177 aa17.74■□□□□ 0.43
USP28-204ENST00000537642 SBK1Q52WX2 424 aa17.74■□□□□ 0.43
USP28-204ENST00000537642 P2RX7Q99572 595 aaKnown RBP17.74■□□□□ 0.43
USP28-204ENST00000537642 MYPNQ86TC9 1320 aa17.73■□□□□ 0.43
USP28-204ENST00000537642 GNAT2P19087 354 aa17.73■□□□□ 0.43
USP28-204ENST00000537642 USP14P54578 494 aa17.73■□□□□ 0.43
USP28-204ENST00000537642 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
USP28-204ENST00000537642 NUCB1Q02818 461 aa17.73■□□□□ 0.43
USP28-204ENST00000537642 MLLT1Q03111 559 aaPredicted RBP17.73■□□□□ 0.43
USP28-204ENST00000537642 TMEM179Q6ZVK1 233 aa17.73■□□□□ 0.43
USP28-204ENST00000537642 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
USP28-204ENST00000537642 EVI5LQ96CN4 794 aa17.73■□□□□ 0.43
USP28-204ENST00000537642 ZNF333Q96JL9 665 aa17.73■□□□□ 0.43
USP28-204ENST00000537642 A0A1W2PRG0 241 aa17.72■□□□□ 0.43
USP28-204ENST00000537642 HERVK_113P62684 666 aa17.72■□□□□ 0.43
USP28-204ENST00000537642 PRKCZQ05513 592 aa17.72■□□□□ 0.43
USP28-204ENST00000537642 CLEC10AQ8IUN9 316 aa17.72■□□□□ 0.43
USP28-204ENST00000537642 SH3TC2Q8TF17 1288 aa17.72■□□□□ 0.43
USP28-204ENST00000537642 CCDC17Q96LX7 622 aa17.72■□□□□ 0.43
USP28-204ENST00000537642 MORF4L1Q9UBU8 362 aa17.72■□□□□ 0.43
USP28-204ENST00000537642 GABRQQ9UN88 632 aa17.72■□□□□ 0.43
USP28-204ENST00000537642 BRCA2P51587 3418 aa17.72■□□□□ 0.43
USP28-204ENST00000537642 RBBP6Q7Z6E9 1792 aaKnown RBP17.71■□□□□ 0.43
USP28-204ENST00000537642 ROBO3Q96MS0 1386 aa17.71■□□□□ 0.43
USP28-204ENST00000537642 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
USP28-204ENST00000537642 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.43
USP28-204ENST00000537642 PEX10O60683 326 aa17.71■□□□□ 0.43
USP28-204ENST00000537642 VCAM1P19320 739 aa17.71■□□□□ 0.43
USP28-204ENST00000537642 NBPF11Q86T75 865 aa17.71■□□□□ 0.43
USP28-204ENST00000537642 SIAH1Q8IUQ4 282 aa17.71■□□□□ 0.43
USP28-204ENST00000537642 RAET1EQ8TD07 263 aa17.71■□□□□ 0.43
USP28-204ENST00000537642 TXNRD2Q9NNW7 524 aa17.71■□□□□ 0.43
USP28-204ENST00000537642 POTEFA5A3E0 1075 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 MINDY4BA8MYZ0 360 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 USP17L15C9J2P7 530 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 USP17L13C9JLJ4 530 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 USP17L11C9JVI0 530 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 USP17L18D6R9N7 530 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 USP17L22D6RA61 530 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 USP17L17D6RBQ6 530 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 USP17L19D6RCP7 530 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 USP17L20D6RJB6 530 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 APPP05067 770 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 TDO2P48775 406 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 USP17L24Q0WX57 530 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 POTEEQ6S8J3 1075 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 CATSPERGQ6ZRH7 1159 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 CCDC129Q6ZRS4 1044 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 PLEKHM2Q8IWE5 1019 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 STK11IPQ8N1F8 1099 aa17.7■□□□□ 0.42
USP28-204ENST00000537642 GREB1LQ9C091 1923 aaPredicted RBP17.7■□□□□ 0.42
USP28-204ENST00000537642 FLT3LGP49771 235 aa17.69■□□□□ 0.42
USP28-204ENST00000537642 ICA1Q05084 483 aa17.69■□□□□ 0.42
USP28-204ENST00000537642 OSBPL3Q9H4L5 887 aa17.69■□□□□ 0.42
USP28-204ENST00000537642 RBPJLQ9UBG7 517 aa17.69■□□□□ 0.42
USP28-204ENST00000537642 FOXP2O15409 715 aa17.68■□□□□ 0.42
USP28-204ENST00000537642 RASA1P20936 1047 aa17.68■□□□□ 0.42
USP28-204ENST00000537642 GRK4P32298 578 aa17.68■□□□□ 0.42
USP28-204ENST00000537642 KIAA1755Q5JYT7 1200 aa17.68■□□□□ 0.42
USP28-204ENST00000537642 GTF3C2Q8WUA4 911 aaPredicted RBP17.68■□□□□ 0.42
USP28-204ENST00000537642 COA7Q96BR5 231 aa17.68■□□□□ 0.42
USP28-204ENST00000537642 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.68■□□□□ 0.42
USP28-204ENST00000537642 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
USP28-204ENST00000537642 RPAP3Q9H6T3 665 aaPredicted RBP17.68■□□□□ 0.42
USP28-204ENST00000537642 ARHGEF10LQ9HCE6 1279 aa17.68■□□□□ 0.42
USP28-204ENST00000537642 RLFQ13129 1914 aa17.67■□□□□ 0.42
USP28-204ENST00000537642 MYCP01106 439 aaPredicted RBP17.67■□□□□ 0.42
USP28-204ENST00000537642 ERVK-9P63128 1117 aa17.67■□□□□ 0.42
USP28-204ENST00000537642 ERVK-24P63145 666 aa17.67■□□□□ 0.42
USP28-204ENST00000537642 Q3C1V9 767 aa17.67■□□□□ 0.42
USP28-204ENST00000537642 GPRC5AQ8NFJ5 357 aa17.67■□□□□ 0.42
USP28-204ENST00000537642 PAGR1Q9BTK6 254 aa17.67■□□□□ 0.42
USP28-204ENST00000537642 MKNK2Q9HBH9 465 aa17.67■□□□□ 0.42
USP28-204ENST00000537642 TMX2Q9Y320 296 aa17.67■□□□□ 0.42
USP28-204ENST00000537642 PLXNB2O15031 1838 aa17.67■□□□□ 0.42
USP28-204ENST00000537642 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
USP28-204ENST00000537642 ADCY3O60266 1144 aa17.66■□□□□ 0.42
USP28-204ENST00000537642 CNMDO75829 334 aa17.66■□□□□ 0.42
USP28-204ENST00000537642 EEF2P13639 858 aaKnown RBP17.66■□□□□ 0.42
USP28-204ENST00000537642 IRF5Q13568 498 aa17.66■□□□□ 0.42
USP28-204ENST00000537642 TICAM2Q86XR7 235 aa17.66■□□□□ 0.42
USP28-204ENST00000537642 FAM227BQ96M60 508 aa17.66■□□□□ 0.42
USP28-204ENST00000537642 TMEM106CQ9BVX2 250 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms