RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 HMX1Q9NP08 348 aaPredicted RBP11.73□□□□□ -0.53
CHD4-207ENST00000537634 MCM9Q9NXL9 1143 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 RBPJLQ9UBG7 517 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 RCAN3Q9UKA8 241 aa11.73□□□□□ -0.53
CHD4-207ENST00000537634 MYH8P13535 1937 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 USP17L15C9J2P7 530 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 USP17L13C9JLJ4 530 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 USP17L11C9JVI0 530 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 USP17L18D6R9N7 530 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 USP17L22D6RA61 530 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 USP17L17D6RBQ6 530 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 USP17L19D6RCP7 530 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 USP17L20D6RJB6 530 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 EVI5O60447 810 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 CYP2B6P20813 491 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 SHMT1P34896 483 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 PLCD1P51178 756 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 USP17L24Q0WX57 530 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 TRIM32Q13049 653 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 TRIB2Q92519 343 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 KIAA1683Q9H0B3 1180 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 PAG1Q9NWQ8 432 aa11.72□□□□□ -0.53
CHD4-207ENST00000537634 MYH7P12883 1935 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 MPHOSPH10O00566 681 aaKnown RBP11.71□□□□□ -0.53
CHD4-207ENST00000537634 XRCC5P13010 732 aaKnown RBP11.71□□□□□ -0.53
CHD4-207ENST00000537634 PRKAR2AP13861 404 aaKnown RBP11.71□□□□□ -0.53
CHD4-207ENST00000537634 ZKSCAN1P17029 563 aaPredicted RBP11.71□□□□□ -0.53
CHD4-207ENST00000537634 VCAM1P19320 739 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 RGS2P41220 211 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 CCNA1P78396 465 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 MAPK8IP2Q13387 824 aaPredicted RBP11.71□□□□□ -0.53
CHD4-207ENST00000537634 GPR142Q7Z601 462 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 NECAB2Q7Z6G3 386 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 PLEKHH3Q7Z736 793 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.53
CHD4-207ENST00000537634 LCORLQ8N3X6 602 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 ANKLE1Q8NAG6 615 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 SDR42E1Q8WUS8 393 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.53
CHD4-207ENST00000537634 PAWRQ96IZ0 340 aaKnown RBP11.71□□□□□ -0.53
CHD4-207ENST00000537634 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.71□□□□□ -0.533e-6■□□□□ 9
CHD4-207ENST00000537634 PORCNQ9H237 461 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 RABGAP1Q9Y3P9 1069 aa11.71□□□□□ -0.53
CHD4-207ENST00000537634 ALPK3Q96L96 1907 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 TRIOBPQ9H2D6 2365 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 TCRBV5S4A2TA0A5A2 114 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 GLRX3O76003 335 aaKnown RBP11.7□□□□□ -0.54
CHD4-207ENST00000537634 GABPAQ06546 454 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 SEPT2Q15019 361 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 Q3C1V9 767 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 WDR78Q5VTH9 848 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 CATSPERGQ6ZRH7 1159 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 ACER1Q8TDN7 264 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 DIS3LQ8TF46 1054 aaKnown RBP11.7□□□□□ -0.54
CHD4-207ENST00000537634 APBA2Q99767 749 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 BOLA2Q9H3K6 86 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 RPAP3Q9H6T3 665 aaPredicted RBP11.7□□□□□ -0.54
CHD4-207ENST00000537634 ARMT1Q9H993 441 aa11.7□□□□□ -0.54
CHD4-207ENST00000537634 DCP1AQ9NPI6 582 aaPredicted RBP11.7□□□□□ -0.54
CHD4-207ENST00000537634 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
CHD4-207ENST00000537634 MBD4O95243 580 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 ATP5JP18859 108 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 ADD2P35612 726 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 MORN1Q5T089 497 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 MAP3K21Q5TCX8 1036 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 AMOTL1Q8IY63 956 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 USP6NLQ92738 828 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 LRRCC1Q9C099 1032 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 RBM27Q9P2N5 1060 aaKnown RBP11.69□□□□□ -0.54
CHD4-207ENST00000537634 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
CHD4-207ENST00000537634 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
CHD4-207ENST00000537634 CNMDO75829 334 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 CYP2D6P10635 497 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 EVX2Q03828 476 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 MAP2K5Q13163 448 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 LBX2Q6XYB7 198 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 TMEM179Q6ZVK1 233 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 SLC44A5Q8NCS7 719 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 HAUS7Q99871 368 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 TANGO6Q9C0B7 1094 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 ATP8A2Q9NTI2 1148 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 IVNS1ABPQ9Y6Y0 642 aa11.68□□□□□ -0.54
CHD4-207ENST00000537634 SLC15A5A6NIM6 579 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 PRKAB2O43741 272 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 CACNB2Q08289 660 aaPredicted RBP11.67□□□□□ -0.54
CHD4-207ENST00000537634 UBE3CQ15386 1083 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 CCL14Q16627 93 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 SLFNL1Q499Z3 407 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 ZSCAN25Q6NSZ9 544 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 DYNLL2Q96FJ2 89 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 C11orf49Q9H6J7 331 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 ARHGEF10LQ9HCE6 1279 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 BTBD7Q9P203 1132 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 OGDHLQ9ULD0 1010 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms