RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 H0YGN5 161 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 GOLIM4O00461 696 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 GLRX3O76003 335 aaKnown RBP11.89□□□□□ -0.51
CCDC170-202ENST00000537358 PDE6AP16499 860 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 CCNA1P78396 465 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 TATDN1Q6P1N9 297 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 DDRGK1Q96HY6 314 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 PAGR1Q9BTK6 254 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC170-202ENST00000537358 HMX1Q9NP08 348 aaPredicted RBP11.89□□□□□ -0.51
CCDC170-202ENST00000537358 PAK6Q9NQU5 681 aaPredicted RBP11.89□□□□□ -0.51
CCDC170-202ENST00000537358 ZBTB40Q9NUA8 1239 aa11.89□□□□□ -0.51
CCDC170-202ENST00000537358 RPTORQ8N122 1335 aa11.88□□□□□ -0.51
CCDC170-202ENST00000537358 ZNF532Q9HCE3 1301 aa11.88□□□□□ -0.51
CCDC170-202ENST00000537358 ERVK-9P63128 1117 aa11.88□□□□□ -0.51
CCDC170-202ENST00000537358 ERVK-24P63145 666 aa11.88□□□□□ -0.51
CCDC170-202ENST00000537358 ZYXQ15942 572 aaKnown RBP11.88□□□□□ -0.51
CCDC170-202ENST00000537358 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
CCDC170-202ENST00000537358 RIOK1Q9BRS2 568 aaKnown RBP11.88□□□□□ -0.51
CCDC170-202ENST00000537358 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
CCDC170-202ENST00000537358 MYH7P12883 1935 aa11.88□□□□□ -0.51
CCDC170-202ENST00000537358 MPHOSPH10O00566 681 aaKnown RBP11.87□□□□□ -0.51
CCDC170-202ENST00000537358 EVI5O60447 810 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
CCDC170-202ENST00000537358 ZKSCAN1P17029 563 aaPredicted RBP11.87□□□□□ -0.51
CCDC170-202ENST00000537358 CYP2B6P20813 491 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 RGS2P41220 211 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 JAG1P78504 1218 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 SHROOM1Q2M3G4 852 aaPredicted RBP11.87□□□□□ -0.51
CCDC170-202ENST00000537358 NECAB2Q7Z6G3 386 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 UBE2Q1Q7Z7E8 422 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 ANKLE1Q8NAG6 615 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 C12orf42Q96LP6 360 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 KIAA1683Q9H0B3 1180 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 GJD2Q9UKL4 321 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 COLQQ9Y215 455 aaPredicted RBP11.87□□□□□ -0.51
CCDC170-202ENST00000537358 RABGAP1Q9Y3P9 1069 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 IVNS1ABPQ9Y6Y0 642 aa11.87□□□□□ -0.51
CCDC170-202ENST00000537358 DDX60LQ5H9U9 1706 aaKnown RBP11.86□□□□□ -0.51
CCDC170-202ENST00000537358 PLCD1P51178 756 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 WDR78Q5VTH9 848 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 ZSCAN25Q6NSZ9 544 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 PLEKHH3Q7Z736 793 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 LRRCC1Q9C099 1032 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 ATP8A2Q9NTI2 1148 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 RBPJLQ9UBG7 517 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 SWAP70Q9UH65 585 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 PLXNB2O15031 1838 aa11.86□□□□□ -0.51
CCDC170-202ENST00000537358 ATP5JP18859 108 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 VCAM1P19320 739 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 SHMT1P34896 483 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 CATSPERGQ6ZRH7 1159 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 GPR142Q7Z601 462 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 SDR42E1Q8WUS8 393 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 GPATCH3Q96I76 525 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 PAWRQ96IZ0 340 aaKnown RBP11.85□□□□□ -0.51
CCDC170-202ENST00000537358 APBA2Q99767 749 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 SH2D4AQ9H788 454 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 TXNRD2Q9NNW7 524 aa11.85□□□□□ -0.51
CCDC170-202ENST00000537358 DCP1AQ9NPI6 582 aaPredicted RBP11.85□□□□□ -0.51
CCDC170-202ENST00000537358 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
CCDC170-202ENST00000537358 BAZ2AQ9UIF9 1905 aaKnown RBP11.84□□□□□ -0.51
CCDC170-202ENST00000537358 MBD4O95243 580 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
CCDC170-202ENST00000537358 ADD2P35612 726 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 GABPAQ06546 454 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 SEPT2Q15019 361 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 LCORLQ8N3X6 602 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 TRIB2Q92519 343 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 HAUS7Q99871 368 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 RPAP3Q9H6T3 665 aaPredicted RBP11.84□□□□□ -0.51
CCDC170-202ENST00000537358 ARMT1Q9H993 441 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 ARHGEF10LQ9HCE6 1279 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 HOXC10Q9NYD6 342 aa11.84□□□□□ -0.51
CCDC170-202ENST00000537358 TCRBV5S4A2TA0A5A2 114 aa11.83□□□□□ -0.52
CCDC170-202ENST00000537358 FXR1P51114 621 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC170-202ENST00000537358 Q3C1V9 767 aa11.83□□□□□ -0.52
CCDC170-202ENST00000537358 MFSD14CQ5VZR4 134 aa11.83□□□□□ -0.52
CCDC170-202ENST00000537358 LBX2Q6XYB7 198 aa11.83□□□□□ -0.52
CCDC170-202ENST00000537358 ACER1Q8TDN7 264 aa11.83□□□□□ -0.52
CCDC170-202ENST00000537358 EDC3Q96F86 508 aaKnown RBP11.83□□□□□ -0.52
CCDC170-202ENST00000537358 CCDC17Q96LX7 622 aa11.83□□□□□ -0.52
CCDC170-202ENST00000537358 TANGO6Q9C0B7 1094 aa11.83□□□□□ -0.52
CCDC170-202ENST00000537358 PORCNQ9H237 461 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms