RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 DAB2P98082 770 aa9.69□□□□□ -0.86
CCDC7-208ENST00000537047 TAGLNQ01995 201 aaKnown RBP9.69□□□□□ -0.86
CCDC7-208ENST00000537047 TTC6Q86TZ1 520 aa9.69□□□□□ -0.86
CCDC7-208ENST00000537047 DIRC2Q96SL1 478 aa9.69□□□□□ -0.86
CCDC7-208ENST00000537047 DUSP15Q9H1R2 295 aaPredicted RBP9.69□□□□□ -0.86
CCDC7-208ENST00000537047 RAP1GAPP47736 663 aa9.68□□□□□ -0.86
CCDC7-208ENST00000537047 PSMD2Q13200 908 aa9.68□□□□□ -0.86
CCDC7-208ENST00000537047 TAF1CQ15572 869 aaPredicted RBP9.68□□□□□ -0.86
CCDC7-208ENST00000537047 SYDE1Q6ZW31 735 aaPredicted RBP9.68□□□□□ -0.86
CCDC7-208ENST00000537047 CREG2Q8IUH2 290 aa9.68□□□□□ -0.86
CCDC7-208ENST00000537047 AEBP1Q8IUX7 1158 aa9.68□□□□□ -0.86
CCDC7-208ENST00000537047 ADAMTS10Q9H324 1103 aa9.68□□□□□ -0.86
CCDC7-208ENST00000537047 LRRN2O75325 713 aa9.67□□□□□ -0.86
CCDC7-208ENST00000537047 TSPAN15O95858 294 aa9.67□□□□□ -0.86
CCDC7-208ENST00000537047 CFPP27918 469 aa9.67□□□□□ -0.86
CCDC7-208ENST00000537047 HK2P52789 917 aa9.67□□□□□ -0.86
CCDC7-208ENST00000537047 KRTAP19-4Q3LI73 84 aa9.67□□□□□ -0.86
CCDC7-208ENST00000537047 C1QL4Q86Z23 238 aa9.67□□□□□ -0.86
CCDC7-208ENST00000537047 CEP131Q9UPN4 1083 aa9.67□□□□□ -0.86
CCDC7-208ENST00000537047 KRT1P04264 644 aa9.66□□□□□ -0.86
CCDC7-208ENST00000537047 PLCG1P19174 1290 aa9.66□□□□□ -0.86
CCDC7-208ENST00000537047 PDE4BQ07343 736 aa9.66□□□□□ -0.86
CCDC7-208ENST00000537047 DNAJC14Q6Y2X3 702 aaPredicted RBP9.66□□□□□ -0.86
CCDC7-208ENST00000537047 NSUN3Q9H649 340 aaKnown RBP9.66□□□□□ -0.86
CCDC7-208ENST00000537047 ADAM30Q9UKF2 790 aa9.66□□□□□ -0.86
CCDC7-208ENST00000537047 TPP2P29144 1249 aaPredicted RBP9.65□□□□□ -0.86
CCDC7-208ENST00000537047 TRHRP34981 398 aaPredicted RBP9.65□□□□□ -0.86
CCDC7-208ENST00000537047 ETV3P41162 512 aa9.65□□□□□ -0.86
CCDC7-208ENST00000537047 FAM13CQ8NE31 585 aa9.65□□□□□ -0.86
CCDC7-208ENST00000537047 PIWIL2Q8TC59 973 aaKnown RBP9.65□□□□□ -0.86
CCDC7-208ENST00000537047 COX4I2Q96KJ9 171 aa9.65□□□□□ -0.86
CCDC7-208ENST00000537047 PPP1R16BQ96T49 567 aa9.65□□□□□ -0.86
CCDC7-208ENST00000537047 NOC4LQ9BVI4 516 aaKnown RBP9.65□□□□□ -0.86
CCDC7-208ENST00000537047 USP31Q70CQ4 1352 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 FAM221AA4D161 298 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 CILPO75339 1184 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 F13A1P00488 732 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 PF4P02776 101 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 C1QTNF9P0C862 333 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 ST13P50502 369 aaKnown RBP9.64□□□□□ -0.87
CCDC7-208ENST00000537047 GAB4Q2WGN9 574 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 TMPRSS7Q7RTY8 843 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 ABHD4Q8TB40 342 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 TOX2Q96NM4 488 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 TMEM59LQ9UK28 342 aa9.64□□□□□ -0.87
CCDC7-208ENST00000537047 KRTAP9-7A8MTY7 169 aa9.63□□□□□ -0.87
CCDC7-208ENST00000537047 PATL2C9JE40 543 aaKnown RBP9.63□□□□□ -0.87
CCDC7-208ENST00000537047 CAMK2GQ13555 558 aaPredicted RBP9.63□□□□□ -0.87
CCDC7-208ENST00000537047 TMC4Q7Z404 712 aa9.63□□□□□ -0.87
CCDC7-208ENST00000537047 DTWD2Q8NBA8 298 aa9.63□□□□□ -0.87
CCDC7-208ENST00000537047 CYB5D2Q8WUJ1 264 aa9.63□□□□□ -0.87
CCDC7-208ENST00000537047 GRIN3BO60391 1043 aa9.62□□□□□ -0.87
CCDC7-208ENST00000537047 SRFP11831 508 aa9.62□□□□□ -0.87
CCDC7-208ENST00000537047 XPCQ01831 940 aaPredicted RBP9.62□□□□□ -0.87
CCDC7-208ENST00000537047 LCNL1Q6ZST4 164 aa9.62□□□□□ -0.87
CCDC7-208ENST00000537047 FBXO33Q7Z6M2 555 aa9.62□□□□□ -0.87
CCDC7-208ENST00000537047 SP110Q9HB58 689 aa9.62□□□□□ -0.87
CCDC7-208ENST00000537047 DNAJA2O60884 412 aa9.61□□□□□ -0.87
CCDC7-208ENST00000537047 RLBP1P12271 317 aa9.61□□□□□ -0.87
CCDC7-208ENST00000537047 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
CCDC7-208ENST00000537047 C19orf44Q9H6X5 657 aa9.61□□□□□ -0.87
CCDC7-208ENST00000537047 POLR3KQ9Y2Y1 108 aaPredicted RBP9.61□□□□□ -0.87
CCDC7-208ENST00000537047 CHURC1-FNTBB4DL54 471 aa9.6□□□□□ -0.87
CCDC7-208ENST00000537047 LRRC56Q8IYG6 542 aaPredicted RBP9.6□□□□□ -0.87
CCDC7-208ENST00000537047 GATAD2BQ8WXI9 593 aa9.6□□□□□ -0.87
CCDC7-208ENST00000537047 MYLIPQ8WY64 445 aa9.6□□□□□ -0.87
CCDC7-208ENST00000537047 RHOVQ96L33 236 aa9.6□□□□□ -0.87
CCDC7-208ENST00000537047 DUSP13Q9UII6 198 aa9.6□□□□□ -0.87
CCDC7-208ENST00000537047 BPNT1O95861 308 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 HPXP02790 462 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 LMNB2Q03252 620 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 EGR3Q06889 387 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 TMEM201Q5SNT2 666 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 ANKLE2Q86XL3 938 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 FBXO15Q8NCQ5 510 aaPredicted RBP9.59□□□□□ -0.87
CCDC7-208ENST00000537047 FBXO27Q8NI29 283 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 BAHD1Q8TBE0 780 aaPredicted RBP9.59□□□□□ -0.87
CCDC7-208ENST00000537047 CCDC120Q96HB5 630 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 GPR62Q9BZJ7 368 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 REV1Q9UBZ9 1251 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 KLHL3Q9UH77 587 aa9.59□□□□□ -0.87
CCDC7-208ENST00000537047 RAC2P15153 192 aa9.58□□□□□ -0.88
CCDC7-208ENST00000537047 TIGD5Q53EQ6 642 aa9.58□□□□□ -0.88
CCDC7-208ENST00000537047 CCDC84Q86UT8 332 aaPredicted RBP9.58□□□□□ -0.88
CCDC7-208ENST00000537047 TSPYL5Q86VY4 417 aaPredicted RBP9.58□□□□□ -0.88
CCDC7-208ENST00000537047 ZSCAN18Q8TBC5 510 aaPredicted RBP9.58□□□□□ -0.88
CCDC7-208ENST00000537047 RNF32Q9H0A6 362 aa9.58□□□□□ -0.88
CCDC7-208ENST00000537047 DCP1AQ9NPI6 582 aaPredicted RBP9.58□□□□□ -0.88
CCDC7-208ENST00000537047 PCDHA11Q9Y5I1 949 aa9.58□□□□□ -0.88
CCDC7-208ENST00000537047 SHISA3A0PJX4 238 aa9.57□□□□□ -0.88
CCDC7-208ENST00000537047 MINDY4BA8MYZ0 360 aa9.57□□□□□ -0.88
CCDC7-208ENST00000537047 GBP2P32456 591 aaPredicted RBP9.57□□□□□ -0.88
CCDC7-208ENST00000537047 YARSP54577 528 aaKnown RBP9.57□□□□□ -0.88
CCDC7-208ENST00000537047 TMEM74Q96NL1 305 aa9.57□□□□□ -0.88
CCDC7-208ENST00000537047 TRIT1Q9H3H1 467 aaKnown RBP9.57□□□□□ -0.88
CCDC7-208ENST00000537047 GPATCH2Q9NW75 528 aa9.57□□□□□ -0.88
CCDC7-208ENST00000537047 EBF1Q9UH73 591 aa9.57□□□□□ -0.88
CCDC7-208ENST00000537047 ZGLP1P0C6A0 271 aa9.56□□□□□ -0.88
CCDC7-208ENST00000537047 SLFN12Q8IYM2 578 aa9.56□□□□□ -0.88
CCDC7-208ENST00000537047 CRELD1Q96HD1 420 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms