RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 EPRSP07814 1512 aaKnown RBP8.93□□□□□ -0.98
CLIP1-207ENST00000536634 RBAK-RBAKDNI3L0D1 243 aa8.92□□□□□ -0.98
CLIP1-207ENST00000536634 TLR3O15455 904 aaKnown RBP8.92□□□□□ -0.98
CLIP1-207ENST00000536634 SLITRK5O94991 958 aa8.92□□□□□ -0.98
CLIP1-207ENST00000536634 PRAMEF13Q5VWM6 474 aa8.92□□□□□ -0.98
CLIP1-207ENST00000536634 DPH2Q9BQC3 489 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-207ENST00000536634 GRIN3BO60391 1043 aa8.91□□□□□ -0.98
CLIP1-207ENST00000536634 GREM1O60565 184 aa8.91□□□□□ -0.98
CLIP1-207ENST00000536634 EOMESO95936 686 aa8.91□□□□□ -0.98
CLIP1-207ENST00000536634 CRKP46108 304 aa8.91□□□□□ -0.98
CLIP1-207ENST00000536634 FBXO41Q8TF61 875 aa8.91□□□□□ -0.98
CLIP1-207ENST00000536634 XAGE3Q8WTP9 111 aa8.91□□□□□ -0.98
CLIP1-207ENST00000536634 ZNF296Q8WUU4 475 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-207ENST00000536634 ACSF2Q96CM8 615 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-207ENST00000536634 UHRF1BP1LA0JNW5 1464 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 TNIKQ9UKE5 1360 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 CST3P01034 146 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-207ENST00000536634 PDE4BQ07343 736 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 MPP2Q14168 576 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 ZNF394Q53GI3 561 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 REC114Q7Z4M0 266 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 KRTAP19-1Q8IUB9 90 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
CLIP1-207ENST00000536634 PLD6Q8N2A8 252 aaKnown RBP8.9□□□□□ -0.98
CLIP1-207ENST00000536634 RIN3Q8TB24 985 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 TMEM87BQ96K49 555 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 MIPEPQ99797 713 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 METTL5Q9NRN9 209 aaKnown RBP8.9□□□□□ -0.98
CLIP1-207ENST00000536634 SUPT16HQ9Y5B9 1047 aaKnown RBP8.9□□□□□ -0.98
CLIP1-207ENST00000536634 PCDHGB7Q9Y5F8 929 aa8.9□□□□□ -0.98
CLIP1-207ENST00000536634 CNTNAP4Q9C0A0 1308 aa8.89□□□□□ -0.99
CLIP1-207ENST00000536634 PLCG1P19174 1290 aa8.89□□□□□ -0.99
CLIP1-207ENST00000536634 OXCT1P55809 520 aa8.89□□□□□ -0.99
CLIP1-207ENST00000536634 DIEXFQ68CQ4 756 aaKnown RBP8.89□□□□□ -0.99
CLIP1-207ENST00000536634 NFXL1Q6ZNB6 911 aa8.89□□□□□ -0.99
CLIP1-207ENST00000536634 ADAM30Q9UKF2 790 aa8.89□□□□□ -0.99
CLIP1-207ENST00000536634 TEX14Q8IWB6 1497 aa8.89□□□□□ -0.99
CLIP1-207ENST00000536634 ZCCHC11Q5TAX3 1644 aaKnown RBP8.88□□□□□ -0.99
CLIP1-207ENST00000536634 NBPF11Q86T75 865 aa8.88□□□□□ -0.99
CLIP1-207ENST00000536634 USP48Q86UV5 1035 aa8.88□□□□□ -0.99
CLIP1-207ENST00000536634 MCATQ8IVS2 390 aaKnown RBP8.88□□□□□ -0.99
CLIP1-207ENST00000536634 MFSD2AQ8NA29 543 aa8.88□□□□□ -0.99
CLIP1-207ENST00000536634 RNF34Q969K3 372 aa8.88□□□□□ -0.99
CLIP1-207ENST00000536634 ZNF428Q96B54 188 aa8.88□□□□□ -0.99
CLIP1-207ENST00000536634 LRRC3Q9BY71 257 aa8.88□□□□□ -0.99
CLIP1-207ENST00000536634 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-207ENST00000536634 UBP1Q9NZI7 540 aa8.88□□□□□ -0.99
CLIP1-207ENST00000536634 KDM5BQ9UGL1 1544 aa8.88□□□□□ -0.99
CLIP1-207ENST00000536634 UACAQ9BZF9 1416 aa8.88□□□□□ -0.99
CLIP1-207ENST00000536634 PRR36Q9H6K5 1346 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 DISP1Q96F81 1524 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 UPK3BL1B0FP48 263 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 UPK3BL2E5RIL1 263 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 PRNPP04156 253 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 ITIH2P19823 946 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 SLC6A19Q695T7 634 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 LETMD1Q6P1Q0 360 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 REV1Q9UBZ9 1251 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 CCDC39Q9UFE4 941 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 PLAGL2Q9UPG8 496 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 KIF21BO75037 1637 aa8.87□□□□□ -0.99
CLIP1-207ENST00000536634 IQGAP2Q13576 1575 aa8.86□□□□□ -0.99
CLIP1-207ENST00000536634 SCAMP3O14828 347 aaKnown RBP8.86□□□□□ -0.99
CLIP1-207ENST00000536634 DNAJA2O60884 412 aa8.86□□□□□ -0.99
CLIP1-207ENST00000536634 HTR3BO95264 441 aa8.86□□□□□ -0.99
CLIP1-207ENST00000536634 CWF19L2Q2TBE0 894 aaKnown RBP8.86□□□□□ -0.99
CLIP1-207ENST00000536634 METTL16Q86W50 562 aaKnown RBP8.86□□□□□ -0.99
CLIP1-207ENST00000536634 NETO1Q8TDF5 533 aa8.86□□□□□ -0.99
CLIP1-207ENST00000536634 BRMS1Q9HCU9 246 aa8.86□□□□□ -0.99
CLIP1-207ENST00000536634 PODXL2Q9NZ53 605 aa8.86□□□□□ -0.99
CLIP1-207ENST00000536634 GTF2IRD1Q9UHL9 959 aa8.86□□□□□ -0.99
CLIP1-207ENST00000536634 CARMIL2Q6F5E8 1435 aa8.86□□□□□ -0.99
CLIP1-207ENST00000536634 CEACAM5P06731 702 aa8.85□□□□□ -0.99
CLIP1-207ENST00000536634 RACK1P63244 317 aaKnown RBP8.85□□□□□ -0.99
CLIP1-207ENST00000536634 TMEM201Q5SNT2 666 aa8.85□□□□□ -0.99
CLIP1-207ENST00000536634 KIAA0825Q8IV33 1275 aa8.85□□□□□ -0.99
CLIP1-207ENST00000536634 FAM13CQ8NE31 585 aa8.85□□□□□ -0.99
CLIP1-207ENST00000536634 EAF1Q96JC9 268 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-207ENST00000536634 SPON2Q9BUD6 331 aa8.85□□□□□ -0.99
CLIP1-207ENST00000536634 MKNK2Q9HBH9 465 aa8.85□□□□□ -0.99
CLIP1-207ENST00000536634 PRDM5Q9NQX1 630 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-207ENST00000536634 TPX2Q9ULW0 747 aaKnown RBP8.85□□□□□ -0.99
CLIP1-207ENST00000536634 ROBO2Q9HCK4 1378 aa8.85□□□□□ -0.99
CLIP1-207ENST00000536634 PRR33A8MZF0 331 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 IGF2BP3O00425 579 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLIP1-207ENST00000536634 WNT11O96014 354 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 GP2P55259 537 aaKnown RBP8.84□□□□□ -0.99
CLIP1-207ENST00000536634 HDLBPQ00341 1268 aaKnown RBP8.84□□□□□ -0.99
CLIP1-207ENST00000536634 SEZ6Q53EL9 994 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 C9orf131Q5VYM1 1079 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 ARHGAP27Q6ZUM4 889 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 KIF27Q86VH2 1401 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 VSIG10LQ86VR7 867 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 WFDC3Q8IUB2 231 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 KLHL3Q9UH77 587 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 DDX41Q9UJV9 622 aaKnown RBP8.84□□□□□ -0.99
CLIP1-207ENST00000536634 ANGEL1Q9UNK9 670 aaKnown RBP8.84□□□□□ -0.99
CLIP1-207ENST00000536634 PCDHB14Q9Y5E9 798 aa8.84□□□□□ -0.99
CLIP1-207ENST00000536634 CHURC1-FNTBB4DL54 471 aa8.83□□□□□ -1
CLIP1-207ENST00000536634 APOBRQ0VD83 1088 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms