RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 SPAG1Q07617 926 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 TBC1D8BQ0IIM8 1120 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 DNAJC21Q5F1R6 531 aaKnown RBP14.6□□□□□ -0.07
PTPN21-202ENST00000536337 NELFBQ8WX92 580 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 CALML4Q96GE6 196 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 LY9Q9HBG7 655 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 RMND1Q9NWS8 449 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 RIPOR2Q9Y4F9 1068 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 SOS2Q07890 1332 aaPredicted RBP14.6□□□□□ -0.07
PTPN21-202ENST00000536337 GYS2P54840 703 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 RBL2Q08999 1139 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 BRINP3Q76B58 766 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 VSTM4Q8IW00 320 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 DHX37Q8IY37 1157 aaKnown RBP14.6□□□□□ -0.07
PTPN21-202ENST00000536337 FBXO3Q9UK99 471 aa14.6□□□□□ -0.07
PTPN21-202ENST00000536337 SPATA31A3Q5VYP0 1347 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 NMT2O60551 498 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 TUBB4AP04350 444 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 CALM1P0DP23 149 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 CALM2P0DP24 149 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 CALM3P0DP25 149 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 OAS2P29728 719 aaKnown RBP14.59□□□□□ -0.07
PTPN21-202ENST00000536337 PAK1Q13153 545 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 TOGARAM2Q6ZUX3 1019 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 GBP3Q9H0R5 595 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 MTF1Q14872 753 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 WWC2Q6AWC2 1192 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 METTL16Q86W50 562 aaKnown RBP14.59□□□□□ -0.07
PTPN21-202ENST00000536337 RICTORQ6R327 1708 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 ENC1O14682 589 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 MROH7-TTC4A0A0A0MT08 1334 aa14.59□□□□□ -0.07
PTPN21-202ENST00000536337 TEX33O43247 280 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 TXKP42681 527 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 RNASE9P60153 205 aaKnown RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 MAPKAPK5Q8IW41 473 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 CEP112Q8N8E3 955 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 CCDC42Q96M95 316 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 SEPT11Q9NVA2 429 aaKnown RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 CALML3P27482 149 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 CRKLP46109 303 aaKnown RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 GABPB1Q06547 395 aaPredicted RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 SMC1AQ14683 1233 aaKnown RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 INF2Q27J81 1249 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 CCDC40Q4G0X9 1142 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 FAM182BQ5T319 152 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 SPTY2D1Q68D10 685 aaPredicted RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 DYMQ7RTS9 669 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 ILDR1Q86SU0 546 aaPredicted RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 CSGALNACT2Q8N6G5 542 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 ACRBPQ8NEB7 543 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 DDX41Q9UJV9 622 aaKnown RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 TNNI2P48788 182 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 PDE4DQ08499 809 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 RAD51AP2Q09MP3 1159 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 MEX3CQ5U5Q3 659 aaKnown RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 RESP18Q5W5W9 173 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 CTR9Q6PD62 1173 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 OSBPL5Q9H0X9 879 aaPredicted RBP14.58□□□□□ -0.08
PTPN21-202ENST00000536337 RSPH14Q9UHP6 348 aa14.58□□□□□ -0.08
PTPN21-202ENST00000536337 GSG1L2A8MUP6 293 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 USO1O60763 962 aaKnown RBP14.57□□□□□ -0.08
PTPN21-202ENST00000536337 LDHBP07195 334 aaKnown RBP14.57□□□□□ -0.08
PTPN21-202ENST00000536337 TCERG1LQ5VWI1 586 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 RPGRQ92834 1020 aaKnown RBP14.57□□□□□ -0.08
PTPN21-202ENST00000536337 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
PTPN21-202ENST00000536337 PALLDQ8WX93 1383 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 H0YHG0 523 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 RFC4P35249 363 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 LIFRP42702 1097 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 PLCD1P51178 756 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 TGFBRAP1Q8WUH2 860 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 GNPATO15228 680 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 STX10O60499 249 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 CCNT1O60563 726 aaKnown RBP14.57□□□□□ -0.08
PTPN21-202ENST00000536337 SPATA1Q5VX52 437 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 FOXP1Q9H334 677 aaPredicted RBP14.57□□□□□ -0.08
PTPN21-202ENST00000536337 CPVLQ9H3G5 476 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 ZNF287Q9HBT7 754 aa14.57□□□□□ -0.08
PTPN21-202ENST00000536337 RBM28Q9NW13 759 aaKnown RBP14.57□□□□□ -0.08
PTPN21-202ENST00000536337 PARP10Q53GL7 1025 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 TPTE2Q6XPS3 522 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 NAPGQ99747 312 aaPredicted RBP14.56□□□□□ -0.08
PTPN21-202ENST00000536337 ANKRD26Q9UPS8 1709 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 LOC102724428A0A0B4J2F2 783 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 ZSCAN20P17040 1043 aaPredicted RBP14.56□□□□□ -0.08
PTPN21-202ENST00000536337 SIK1P57059 783 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 FMR1Q06787 632 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTPN21-202ENST00000536337 KIF5AQ12840 1032 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 IGDCC4Q8TDY8 1250 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 WDR24Q96S15 920 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 ZMYND10O75800 440 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 PTPREP23469 700 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 CYLC1P35663 651 aaPredicted RBP14.56□□□□□ -0.08
PTPN21-202ENST00000536337 CASP7P55210 303 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 RPS8P62241 208 aaKnown RBP14.56□□□□□ -0.08
PTPN21-202ENST00000536337 TMEM266Q2M3C6 531 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 FERMT2Q96AC1 680 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 CEP89Q96ST8 783 aa14.56□□□□□ -0.08
PTPN21-202ENST00000536337 RIMBP2O15034 1052 aa14.55□□□□□ -0.08
PTPN21-202ENST00000536337 ARID4AP29374 1257 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms