RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 MKNK2Q9HBH9 465 aa21.29■■□□□ 1
DDX55-204ENST00000536079 AS3MTQ9HBK9 375 aa21.29■■□□□ 1
DDX55-204ENST00000536079 EMILIN3Q9NT22 766 aa21.29■■□□□ 1
DDX55-204ENST00000536079 ZMYM6O95789 1325 aa21.29■■□□□ 1
DDX55-204ENST00000536079 RAD50Q92878 1312 aa21.29■■□□□ 1
DDX55-204ENST00000536079 PTPRFP10586 1907 aa21.28■■□□□ 1
DDX55-204ENST00000536079 ZYXQ15942 572 aaKnown RBP21.28■■□□□ 1
DDX55-204ENST00000536079 FAM47AQ5JRC9 791 aa21.28■■□□□ 1
DDX55-204ENST00000536079 KIAA1755Q5JYT7 1200 aa21.28■■□□□ 1
DDX55-204ENST00000536079 USP17L10C9JJH3 530 aa21.27■■□□□ 1
DDX55-204ENST00000536079 ALDH1A1P00352 501 aa21.27■■□□□ 1
DDX55-204ENST00000536079 CYP2C8P10632 490 aa21.27■■□□□ 1
DDX55-204ENST00000536079 TAF1CQ15572 869 aaPredicted RBP21.27■■□□□ 1
DDX55-204ENST00000536079 OTUD7BQ6GQQ9 843 aa21.27■■□□□ 1
DDX55-204ENST00000536079 FASTKD5Q7L8L6 764 aaKnown RBP21.27■■□□□ 1
DDX55-204ENST00000536079 ESYT1Q9BSJ8 1104 aa21.27■■□□□ 1
DDX55-204ENST00000536079 IGKV6D-41A0A0C4DH26 115 aa21.26■□□□□ 0.99
DDX55-204ENST00000536079 FGRP09769 529 aa21.26■□□□□ 0.99
DDX55-204ENST00000536079 CAP1Q01518 475 aa21.26■□□□□ 0.99
DDX55-204ENST00000536079 RUFY2Q8WXA3 655 aa21.26■□□□□ 0.99
DDX55-204ENST00000536079 AGTPBP1Q9UPW5 1226 aa21.26■□□□□ 0.99
DDX55-204ENST00000536079 GPR25O00155 361 aa21.25■□□□□ 0.99
DDX55-204ENST00000536079 EEF2P13639 858 aaKnown RBP21.25■□□□□ 0.99
DDX55-204ENST00000536079 ICA1Q05084 483 aa21.25■□□□□ 0.99
DDX55-204ENST00000536079 PDE4BQ07343 736 aa21.25■□□□□ 0.99
DDX55-204ENST00000536079 COL13A1Q5TAT6 717 aaPredicted RBP21.25■□□□□ 0.99
DDX55-204ENST00000536079 ZNF444Q8N0Y2 327 aaPredicted RBP21.25■□□□□ 0.99
DDX55-204ENST00000536079 PROCA1Q8NCQ7 364 aaPredicted RBP21.25■□□□□ 0.99
DDX55-204ENST00000536079 KIAA1683Q9H0B3 1180 aa21.25■□□□□ 0.99
DDX55-204ENST00000536079 TAF6LQ9Y6J9 622 aa21.25■□□□□ 0.99
DDX55-204ENST00000536079 ADGRA2Q96PE1 1338 aa21.25■□□□□ 0.99
DDX55-204ENST00000536079 C19orf81C9J6K1 198 aa21.24■□□□□ 0.99
DDX55-204ENST00000536079 TFAP4Q01664 338 aa21.24■□□□□ 0.99
DDX55-204ENST00000536079 USP17L2Q6R6M4 530 aa21.24■□□□□ 0.99
DDX55-204ENST00000536079 ZNF296Q8WUU4 475 aaPredicted RBP21.24■□□□□ 0.99
DDX55-204ENST00000536079 FEZ1Q99689 392 aa21.24■□□□□ 0.99
DDX55-204ENST00000536079 ZCCHC17Q9NP64 241 aaKnown RBP21.24■□□□□ 0.99
DDX55-204ENST00000536079 GREB1LQ9C091 1923 aaPredicted RBP21.23■□□□□ 0.99
DDX55-204ENST00000536079 LOC285556D6RIA3 1793 aa21.23■□□□□ 0.99
DDX55-204ENST00000536079 NMT2O60551 498 aa21.23■□□□□ 0.99
DDX55-204ENST00000536079 SLC3A2P08195 630 aaKnown RBP21.23■□□□□ 0.99
DDX55-204ENST00000536079 NEDD1Q8NHV4 660 aa21.23■□□□□ 0.99
DDX55-204ENST00000536079 LSG1Q9H089 658 aaKnown RBP21.23■□□□□ 0.99
DDX55-204ENST00000536079 KANSL2Q9H9L4 492 aa21.23■□□□□ 0.99
DDX55-204ENST00000536079 ZFYVE28Q9HCC9 887 aa21.23■□□□□ 0.99
DDX55-204ENST00000536079 PRDM10Q9NQV6 1147 aa21.23■□□□□ 0.99
DDX55-204ENST00000536079 IL17RBQ9NRM6 502 aa21.23■□□□□ 0.99
DDX55-204ENST00000536079 MYH8P13535 1937 aa21.23■□□□□ 0.99
DDX55-204ENST00000536079 NEDD4P46934 1319 aa21.23■□□□□ 0.99
DDX55-204ENST00000536079 ZNF213O14771 459 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 ORC4O43929 436 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 CDC45O75419 566 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 ATP2B2Q01814 1243 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 RRP12Q5JTH9 1297 aaKnown RBP21.22■□□□□ 0.99
DDX55-204ENST00000536079 AKNAD1Q5T1N1 836 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 POTEEQ6S8J3 1075 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 STAG1Q8WVM7 1258 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 CEP95Q96GE4 821 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 C12orf42Q96LP6 360 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 TMOD4Q9NZQ9 345 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 CPA4Q9UI42 421 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 TMX2Q9Y320 296 aa21.22■□□□□ 0.99
DDX55-204ENST00000536079 RANBP6O60518 1105 aaKnown RBP21.21■□□□□ 0.99
DDX55-204ENST00000536079 TLR2O60603 784 aa21.21■□□□□ 0.99
DDX55-204ENST00000536079 MAP4K1Q92918 833 aa21.21■□□□□ 0.99
DDX55-204ENST00000536079 ASCC2Q9H1I8 757 aaPredicted RBP21.21■□□□□ 0.99
DDX55-204ENST00000536079 ZNF287Q9HBT7 754 aa21.21■□□□□ 0.99
DDX55-204ENST00000536079 MTMR4Q9NYA4 1195 aa21.21■□□□□ 0.99
DDX55-204ENST00000536079 SLC45A1Q9Y2W3 748 aa21.21■□□□□ 0.99
DDX55-204ENST00000536079 PLIN4Q96Q06 1357 aa21.21■□□□□ 0.99
DDX55-204ENST00000536079 PEX10O60683 326 aa21.2■□□□□ 0.98
DDX55-204ENST00000536079 CYP21A2P08686 494 aa21.2■□□□□ 0.98
DDX55-204ENST00000536079 TSPY3P0CV98 308 aa21.2■□□□□ 0.98
DDX55-204ENST00000536079 TSPY8P0CW00 308 aa21.2■□□□□ 0.98
DDX55-204ENST00000536079 VCAM1P19320 739 aa21.2■□□□□ 0.98
DDX55-204ENST00000536079 C17orf99Q6UX52 265 aa21.2■□□□□ 0.98
DDX55-204ENST00000536079 SPICE1Q8N0Z3 855 aa21.2■□□□□ 0.98
DDX55-204ENST00000536079 TOMM22Q9NS69 142 aa21.2■□□□□ 0.98
DDX55-204ENST00000536079 CTNNA3Q9UI47 895 aa21.2■□□□□ 0.98
DDX55-204ENST00000536079 CASP8AP2Q9UKL3 1982 aa21.19■□□□□ 0.98
DDX55-204ENST00000536079 HOXA7P31268 230 aaPredicted RBP21.19■□□□□ 0.98
DDX55-204ENST00000536079 USP14P54578 494 aa21.19■□□□□ 0.98
DDX55-204ENST00000536079 IMMTQ16891 758 aaKnown RBP21.19■□□□□ 0.98
DDX55-204ENST00000536079 NOM1Q5C9Z4 860 aaKnown RBP21.19■□□□□ 0.98
DDX55-204ENST00000536079 MFSD6Q6ZSS7 791 aa21.19■□□□□ 0.98
DDX55-204ENST00000536079 PARK7Q99497 189 aaKnown RBP21.19■□□□□ 0.98
DDX55-204ENST00000536079 P2RX7Q99572 595 aaKnown RBP21.19■□□□□ 0.98
DDX55-204ENST00000536079 ARHGEF10LQ9HCE6 1279 aa21.19■□□□□ 0.98
DDX55-204ENST00000536079 NYAP2Q9P242 653 aa21.19■□□□□ 0.98
DDX55-204ENST00000536079 CLIP2Q9UDT6 1046 aa21.19■□□□□ 0.98
DDX55-204ENST00000536079 RBM8AQ9Y5S9 174 aaKnown RBP21.19■□□□□ 0.98
DDX55-204ENST00000536079 TSPY2A6NKD2 308 aa21.18■□□□□ 0.98
DDX55-204ENST00000536079 FKTNO75072 461 aa21.18■□□□□ 0.98
DDX55-204ENST00000536079 RPAP3Q9H6T3 665 aaPredicted RBP21.18■□□□□ 0.98
DDX55-204ENST00000536079 VCPKMTQ9H867 229 aa21.18■□□□□ 0.98
DDX55-204ENST00000536079 U3KPZ7 1027 aaPredicted RBP21.18■□□□□ 0.98
DDX55-204ENST00000536079 ECM2O94769 699 aaPredicted RBP21.17■□□□□ 0.98
DDX55-204ENST00000536079 BCRP11274 1271 aa21.17■□□□□ 0.98
DDX55-204ENST00000536079 CTGFP29279 349 aa21.17■□□□□ 0.98
DDX55-204ENST00000536079 CATSPERGQ6ZRH7 1159 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms