RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ARMC5Q96C12 935 aa19.7■□□□□ 0.74
ATL3-202ENST00000535789 C12orf42Q96LP6 360 aa19.7■□□□□ 0.74
ATL3-202ENST00000535789 FSD1Q9BTV5 496 aa19.7■□□□□ 0.74
ATL3-202ENST00000535789 PDE4DIPQ5VU43 2346 aa19.69■□□□□ 0.74
ATL3-202ENST00000535789 ZFYP08048 801 aaPredicted RBP19.69■□□□□ 0.74
ATL3-202ENST00000535789 ZYXQ15942 572 aaKnown RBP19.69■□□□□ 0.74
ATL3-202ENST00000535789 SMCR8Q8TEV9 937 aaPredicted RBP19.69■□□□□ 0.74
ATL3-202ENST00000535789 FRMPD3Q5JV73 1810 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 C19orf81C9J6K1 198 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 HOXA7P31268 230 aaPredicted RBP19.68■□□□□ 0.74
ATL3-202ENST00000535789 CDK8P49336 464 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 NUCB1Q02818 461 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 FAM110CQ1W6H9 321 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 KIAA1755Q5JYT7 1200 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 SIAH1Q8IUQ4 282 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 RWDD1Q9H446 243 aaPredicted RBP19.68■□□□□ 0.74
ATL3-202ENST00000535789 TXNRD2Q9NNW7 524 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 ARPP21Q9UBL0 812 aaPredicted RBP19.68■□□□□ 0.74
ATL3-202ENST00000535789 SRRDQ9UH36 339 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 SWAP70Q9UH65 585 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 PNMA3Q9UL41 463 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 GABRQQ9UN88 632 aa19.68■□□□□ 0.74
ATL3-202ENST00000535789 PRKCZQ05513 592 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 KIF22Q14807 665 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 SBK1Q52WX2 424 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 USP17L2Q6R6M4 530 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 CCDC129Q6ZRS4 1044 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 ZNF333Q96JL9 665 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 KIAA1683Q9H0B3 1180 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 TMOD4Q9NZQ9 345 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 GTF3C3Q9Y5Q9 886 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 MYPNQ86TC9 1320 aa19.67■□□□□ 0.74
ATL3-202ENST00000535789 ZNFX1Q9P2E3 1918 aaKnown RBP19.66■□□□□ 0.74
ATL3-202ENST00000535789 POTEFA5A3E0 1075 aa19.66■□□□□ 0.74
ATL3-202ENST00000535789 VCAM1P19320 739 aa19.66■□□□□ 0.74
ATL3-202ENST00000535789 CHD1LQ86WJ1 897 aa19.66■□□□□ 0.74
ATL3-202ENST00000535789 PLEKHM2Q8IWE5 1019 aa19.66■□□□□ 0.74
ATL3-202ENST00000535789 SH3TC2Q8TF17 1288 aa19.66■□□□□ 0.74
ATL3-202ENST00000535789 P2RX7Q99572 595 aaKnown RBP19.66■□□□□ 0.74
ATL3-202ENST00000535789 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.66■□□□□ 0.74
ATL3-202ENST00000535789 MPHOSPH10O00566 681 aaKnown RBP19.65■□□□□ 0.74
ATL3-202ENST00000535789 GNRH1P01148 92 aa19.65■□□□□ 0.74
ATL3-202ENST00000535789 HERVK_113P62684 666 aa19.65■□□□□ 0.74
ATL3-202ENST00000535789 GIMAP6Q6P9H5 292 aa19.65■□□□□ 0.74
ATL3-202ENST00000535789 TMEM179Q6ZVK1 233 aa19.65■□□□□ 0.74
ATL3-202ENST00000535789 FEZ1Q99689 392 aa19.65■□□□□ 0.74
ATL3-202ENST00000535789 CABP5Q9NP86 173 aa19.65■□□□□ 0.74
ATL3-202ENST00000535789 MORF4L1Q9UBU8 362 aa19.65■□□□□ 0.74
ATL3-202ENST00000535789 ZNF236Q9UL36 1845 aa19.65■□□□□ 0.74
ATL3-202ENST00000535789 A0A0D9SFI3 127 aa19.64■□□□□ 0.73
ATL3-202ENST00000535789 FMNL1O95466 1100 aaPredicted RBP19.64■□□□□ 0.73
ATL3-202ENST00000535789 RASA1P20936 1047 aa19.64■□□□□ 0.73
ATL3-202ENST00000535789 FCGRTP55899 365 aa19.64■□□□□ 0.73
ATL3-202ENST00000535789 IRX3P78415 501 aaPredicted RBP19.64■□□□□ 0.73
ATL3-202ENST00000535789 PABPC4Q13310 644 aaKnown RBP eCLIP19.64■□□□□ 0.73
ATL3-202ENST00000535789 ERICH6BQ5W0A0 696 aa19.64■□□□□ 0.73
ATL3-202ENST00000535789 STK11IPQ8N1F8 1099 aa19.64■□□□□ 0.73
ATL3-202ENST00000535789 EVI5LQ96CN4 794 aa19.64■□□□□ 0.73
ATL3-202ENST00000535789 TAOK2Q9UL54 1235 aa19.64■□□□□ 0.73
ATL3-202ENST00000535789 CNMDO75829 334 aa19.63■□□□□ 0.73
ATL3-202ENST00000535789 PDE4AP27815 886 aa19.63■□□□□ 0.73
ATL3-202ENST00000535789 GCLCP48506 637 aaPredicted RBP19.63■□□□□ 0.73
ATL3-202ENST00000535789 ARHGEF6Q15052 776 aa19.63■□□□□ 0.73
ATL3-202ENST00000535789 SLC9C1Q4G0N8 1177 aa19.63■□□□□ 0.73
ATL3-202ENST00000535789 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
ATL3-202ENST00000535789 IFNL3Q8IZI9 196 aa19.63■□□□□ 0.73
ATL3-202ENST00000535789 FAM227BQ96M60 508 aa19.63■□□□□ 0.73
ATL3-202ENST00000535789 RBPJLQ9UBG7 517 aa19.63■□□□□ 0.73
ATL3-202ENST00000535789 ZBTB47Q9UFB7 747 aaPredicted RBP19.63■□□□□ 0.73
ATL3-202ENST00000535789 PLXNA1Q9UIW2 1896 aa19.62■□□□□ 0.73
ATL3-202ENST00000535789 PRMT2P55345 433 aa19.62■□□□□ 0.73
ATL3-202ENST00000535789 ICA1Q05084 483 aa19.62■□□□□ 0.73
ATL3-202ENST00000535789 OSBPL3Q9H4L5 887 aa19.62■□□□□ 0.73
ATL3-202ENST00000535789 TACC3Q9Y6A5 838 aa19.62■□□□□ 0.73
ATL3-202ENST00000535789 ALPK3Q96L96 1907 aa19.61■□□□□ 0.73
ATL3-202ENST00000535789 MINDY4BA8MYZ0 360 aa19.61■□□□□ 0.73
ATL3-202ENST00000535789 PATL2C9JE40 543 aaKnown RBP19.61■□□□□ 0.73
ATL3-202ENST00000535789 GNAT2P19087 354 aa19.61■□□□□ 0.73
ATL3-202ENST00000535789 TDO2P48775 406 aa19.61■□□□□ 0.73
ATL3-202ENST00000535789 USP14P54578 494 aa19.61■□□□□ 0.73
ATL3-202ENST00000535789 MLLT1Q03111 559 aaPredicted RBP19.61■□□□□ 0.73
ATL3-202ENST00000535789 Q3C1V9 767 aa19.61■□□□□ 0.73
ATL3-202ENST00000535789 CATSPERGQ6ZRH7 1159 aa19.61■□□□□ 0.73
ATL3-202ENST00000535789 AMOTL1Q8IY63 956 aa19.61■□□□□ 0.73
ATL3-202ENST00000535789 DDRGK1Q96HY6 314 aa19.61■□□□□ 0.73
ATL3-202ENST00000535789 RPAP3Q9H6T3 665 aaPredicted RBP19.61■□□□□ 0.73
ATL3-202ENST00000535789 SPDYE16A6NNV3 312 aaPredicted RBP19.6■□□□□ 0.73
ATL3-202ENST00000535789 TNPO2O14787 897 aaKnown RBP19.6■□□□□ 0.73
ATL3-202ENST00000535789 FLT3LGP49771 235 aa19.6■□□□□ 0.73
ATL3-202ENST00000535789 MTFR1Q15390 333 aa19.6■□□□□ 0.73
ATL3-202ENST00000535789 ZNF589Q86UQ0 364 aaPredicted RBP19.6■□□□□ 0.73
ATL3-202ENST00000535789 CCDC17Q96LX7 622 aa19.6■□□□□ 0.73
ATL3-202ENST00000535789 PORCNQ9H237 461 aa19.6■□□□□ 0.73
ATL3-202ENST00000535789 TMX2Q9Y320 296 aa19.6■□□□□ 0.73
ATL3-202ENST00000535789 PLIN4Q96Q06 1357 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 IGKV6D-41A0A0C4DH26 115 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 USP17L15C9J2P7 530 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 USP17L13C9JLJ4 530 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 USP17L11C9JVI0 530 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 USP17L18D6R9N7 530 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms