RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CD163Q86VB7 1156 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 SLFN12Q8IYM2 578 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 PHACTR4Q8IZ21 702 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 FAM13CQ8NE31 585 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 EZH1Q92800 747 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-202ENST00000535689 SMARCC1Q92922 1105 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-202ENST00000535689 FOXQ1Q9C009 403 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 DISC1Q9NRI5 854 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 STOML1Q9UBI4 398 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 GTF2IRD1Q9UHL9 959 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 ARID4BQ4LE39 1312 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-202ENST00000535689 BIVM-ERCC5R4GMW8 1640 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 UACAQ9BZF9 1416 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 EPRSP07814 1512 aaKnown RBP4.89□□□□□ -1.63
SNHG1-202ENST00000535689 RUSC2Q8N2Y8 1516 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 MEIS3P2A8K0S8 358 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 MAP4P27816 1152 aaKnown RBP4.89□□□□□ -1.63
SNHG1-202ENST00000535689 GIPRP48546 466 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 RNF4P78317 190 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 INPP5AQ14642 412 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 NFKBIBQ15653 356 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 FXNQ16595 210 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 PPM1JQ5JR12 505 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 CDCP2Q5VXM1 449 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 C2CD4AQ8NCU7 369 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-202ENST00000535689 TMEM40Q8WWA1 233 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 TMEM87BQ96K49 555 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 FAM83CQ9BQN1 747 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 REV1Q9UBZ9 1251 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 PRKAG3Q9UGI9 489 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 PPP1R9AQ9ULJ8 1098 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 RAXQ9Y2V3 346 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 PCDHGC5Q9Y5F6 944 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 ACTL7BQ9Y614 415 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 CFAP43Q8NDM7 1665 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 CD109Q6YHK3 1445 aa4.89□□□□□ -1.63
SNHG1-202ENST00000535689 MSTNO14793 375 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 WISP1O95388 367 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 ECEL1O95672 775 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 CST3P01034 146 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-202ENST00000535689 FGRP09769 529 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 H2AFB1P0C5Y9 115 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 H2AFB2P0C5Z0 115 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 HCLS1P14317 486 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-202ENST00000535689 RAB6AP20340 208 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 GUCY2CP25092 1073 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 CASP7P55210 303 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 RBL2Q08999 1139 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 LRP10Q7Z4F1 713 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 FAM20CQ8IXL6 584 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 AGGF1Q8N302 714 aaeCLIP4.88□□□□□ -1.63
SNHG1-202ENST00000535689 TP53INP1Q96A56 240 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 WDR89Q96FK6 387 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-202ENST00000535689 ASCC2Q9H1I8 757 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-202ENST00000535689 ACSS3Q9H6R3 686 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 PHAXQ9H814 394 aaKnown RBP4.88□□□□□ -1.63
SNHG1-202ENST00000535689 ATG3Q9NT62 314 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 SIRPGQ9P1W8 387 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 KCNH3Q9ULD8 1083 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 DAGLAQ9Y4D2 1042 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 CSADQ9Y600 493 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 PTPRMP28827 1452 aa4.88□□□□□ -1.63
SNHG1-202ENST00000535689 COL17A1Q9UMD9 1497 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-202ENST00000535689 MAGI3Q5TCQ9 1506 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 TNFRSF10CO14798 259 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 GRIN3BO60391 1043 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 CLSTN1O94985 981 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 DLGAP3O95886 979 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 CTSBP07858 339 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 DRD2P14416 443 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 KIR3DL1P43629 444 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 CRKP46108 304 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 PREPP48147 710 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 PTPN11Q06124 597 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-202ENST00000535689 NCAPHQ15003 741 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 RASIP1Q5U651 963 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 BEND4Q6ZU67 534 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 ARHGAP27Q6ZUM4 889 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 NLRC3Q7RTR2 1065 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 CYB5D2Q8WUJ1 264 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 MKL1Q969V6 931 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 ISL2Q96A47 359 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 ANAPC16Q96DE5 110 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 CNNM2Q9H8M5 875 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 FAM105AQ9NUU6 356 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 ACTR10Q9NZ32 417 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 KLHL3Q9UH77 587 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 POGZQ7Z3K3 1410 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 KDM5BQ9UGL1 1544 aa4.87□□□□□ -1.63
SNHG1-202ENST00000535689 SLC22A31A6NKX4 558 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 AGRPO00253 132 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 RGS13O14921 159 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 ALX3O95076 343 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 APPP05067 770 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 FURINP09958 794 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 NME1P15531 152 aaKnown RBP4.86□□□□□ -1.63
SNHG1-202ENST00000535689 CANXP27824 592 aaKnown RBP4.86□□□□□ -1.63
SNHG1-202ENST00000535689 ZNF143P52747 638 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-202ENST00000535689 CLCQ05315 142 aa4.86□□□□□ -1.63
SNHG1-202ENST00000535689 PPP2R5EQ16537 467 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms