RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 GNL3LQ9NVN8 582 aaKnown RBP10.35□□□□□ -0.75
CLIP1-206ENST00000535290 DENND2AQ9ULE3 1009 aa10.35□□□□□ -0.75
CLIP1-206ENST00000535290 TCF20Q9UGU0 1960 aaKnown RBP10.35□□□□□ -0.75
CLIP1-206ENST00000535290 RLFQ13129 1914 aa10.35□□□□□ -0.75
CLIP1-206ENST00000535290 GPR75-ASB3A0A0A6YYF3 556 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 FAM86C2PA6NEL3 165 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 C19orf81C9J6K1 198 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 EYA2O00167 538 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 PQBP1O60828 265 aaKnown RBP10.34□□□□□ -0.75
CLIP1-206ENST00000535290 GLRX3O76003 335 aaKnown RBP10.34□□□□□ -0.75
CLIP1-206ENST00000535290 GRB14Q14449 540 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 PRAMEF19Q5SWL8 479 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 CCDC129Q6ZRS4 1044 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 C16orf59Q7L2K0 433 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 WWC1Q8IX03 1113 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 ZNF384Q8TF68 577 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 GTF3C2Q8WUA4 911 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-206ENST00000535290 KHSRPQ92945 711 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLIP1-206ENST00000535290 ABCF2Q9UG63 623 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 RABGAP1Q9Y3P9 1069 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 FRMPD3Q5JV73 1810 aa10.34□□□□□ -0.75
CLIP1-206ENST00000535290 MROH7-TTC4A0A0A0MT08 1334 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 FANCIQ9NVI1 1328 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L10C9JJH3 530 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 SEPT4O43236 478 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 ASNSP08243 561 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 RFX5P48382 616 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-206ENST00000535290 VASPP50552 380 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-206ENST00000535290 CCNA1P78396 465 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 FAM47AQ5JRC9 791 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 RASIP1Q5U651 963 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 ATG9AQ7Z3C6 839 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 TMEM39AQ9NV64 488 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 PHF24Q9UPV7 400 aa10.33□□□□□ -0.76
CLIP1-206ENST00000535290 SEMA3EO15041 775 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 GPR37L1O60883 481 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 ADORA1P30542 326 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 MRE11P49959 708 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 MECOMQ03112 1051 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 EXOSC9Q06265 439 aaKnown RBP10.32□□□□□ -0.76
CLIP1-206ENST00000535290 FAAP100Q0VG06 881 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 RASGRF1Q13972 1273 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 ATP2B3Q16720 1220 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 TMEM240Q5SV17 173 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 SLF2Q8IX21 1173 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 MICALL1Q8N3F8 863 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 ZGPATQ8N5A5 531 aaKnown RBP10.32□□□□□ -0.76
CLIP1-206ENST00000535290 TSPYL2Q9H2G4 693 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-206ENST00000535290 DNAJC18Q9H819 358 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 BTBD7Q9P203 1132 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 HERC5Q9UII4 1024 aaKnown RBP10.32□□□□□ -0.76
CLIP1-206ENST00000535290 IVNS1ABPQ9Y6Y0 642 aa10.32□□□□□ -0.76
CLIP1-206ENST00000535290 GDF11O95390 407 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 OLFML2BQ68BL8 750 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 CCDC102BQ68D86 513 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 DPP9Q86TI2 863 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 SLC44A5Q8NCS7 719 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 NKX2-4Q9H2Z4 354 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 PI4KBQ9UBF8 816 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 IL16Q14005 1332 aa10.31□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L15C9J2P7 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L13C9JLJ4 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L11C9JVI0 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L18D6R9N7 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L22D6RA61 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L17D6RBQ6 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L19D6RCP7 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L20D6RJB6 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 ERC2O15083 957 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 COBLO75128 1261 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 TIMP1P01033 207 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 ACRP10323 421 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 ADORA2AP29274 412 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L24Q0WX57 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 AAK1Q2M2I8 961 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 USP17L2Q6R6M4 530 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 ANKRD33Q7Z3H0 272 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 MSRAQ9UJ68 235 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 ZBTB21Q9ULJ3 1066 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 YBX2Q9Y2T7 364 aaKnown RBP10.3□□□□□ -0.76
CLIP1-206ENST00000535290 MYH2Q9UKX2 1941 aa10.3□□□□□ -0.76
CLIP1-206ENST00000535290 CHD9Q3L8U1 2897 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 CACNA1AO00555 2505 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 A0A1W2PQ45 241 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-206ENST00000535290 A0A1W2PQY0 241 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 PGK1P00558 417 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 CSF2RAP15509 400 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 SKIV2LQ15477 1246 aaKnown RBP10.29□□□□□ -0.76
CLIP1-206ENST00000535290 ZYXQ15942 572 aaKnown RBP10.29□□□□□ -0.76
CLIP1-206ENST00000535290 SPTY2D1Q68D10 685 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-206ENST00000535290 MFSD5Q6N075 450 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 CATSPERGQ6ZRH7 1159 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 ZNF365Q70YC5 407 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 ERICH6Q7L0X2 663 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 TEX11Q8IYF3 940 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 TOX2Q96NM4 488 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 SIL1Q9H173 461 aa10.29□□□□□ -0.76
CLIP1-206ENST00000535290 XPNPEP3Q9NQH7 507 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms