RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 PQBP1O60828 265 aaKnown RBP13.42□□□□□ -0.26
VAMP1-204ENST00000535180 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
VAMP1-204ENST00000535180 TIMP1P01033 207 aa13.42□□□□□ -0.26
VAMP1-204ENST00000535180 FAAP100Q0VG06 881 aa13.42□□□□□ -0.26
VAMP1-204ENST00000535180 SKIV2LQ15477 1246 aaKnown RBP13.42□□□□□ -0.26
VAMP1-204ENST00000535180 TMEM240Q5SV17 173 aa13.42□□□□□ -0.26
VAMP1-204ENST00000535180 WDR78Q5VTH9 848 aa13.42□□□□□ -0.26
VAMP1-204ENST00000535180 MICALL1Q8N3F8 863 aa13.42□□□□□ -0.26
VAMP1-204ENST00000535180 TOX2Q96NM4 488 aa13.42□□□□□ -0.26
VAMP1-204ENST00000535180 COG5Q9UP83 839 aa13.42□□□□□ -0.26
VAMP1-204ENST00000535180 IVNS1ABPQ9Y6Y0 642 aa13.42□□□□□ -0.26
VAMP1-204ENST00000535180 F6X3S4 739 aa13.41□□□□□ -0.26
VAMP1-204ENST00000535180 CNMDO75829 334 aa13.41□□□□□ -0.26
VAMP1-204ENST00000535180 RALBP1Q15311 655 aa13.41□□□□□ -0.26
VAMP1-204ENST00000535180 OLFML2BQ68BL8 750 aa13.41□□□□□ -0.26
VAMP1-204ENST00000535180 MFSD5Q6N075 450 aa13.41□□□□□ -0.26
VAMP1-204ENST00000535180 ANKRD33Q7Z3H0 272 aa13.41□□□□□ -0.26
VAMP1-204ENST00000535180 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
VAMP1-204ENST00000535180 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
VAMP1-204ENST00000535180 KCNH6Q9H252 994 aa13.41□□□□□ -0.26
VAMP1-204ENST00000535180 NKX2-4Q9H2Z4 354 aa13.41□□□□□ -0.26
VAMP1-204ENST00000535180 ZNF318Q5VUA4 2279 aa13.41□□□□□ -0.26
VAMP1-204ENST00000535180 ZDBF2Q9HCK1 2354 aa13.4□□□□□ -0.26
VAMP1-204ENST00000535180 USP17L10C9JJH3 530 aa13.4□□□□□ -0.26
VAMP1-204ENST00000535180 APAF1O14727 1248 aa13.4□□□□□ -0.26
VAMP1-204ENST00000535180 SLC5A1P13866 664 aa13.4□□□□□ -0.26
VAMP1-204ENST00000535180 PPIGQ13427 754 aaKnown RBP eCLIP13.4□□□□□ -0.268e-7■■■□□ 14.9
VAMP1-204ENST00000535180 FAM47AQ5JRC9 791 aa13.4□□□□□ -0.26
VAMP1-204ENST00000535180 CCER1Q8TC90 406 aaPredicted RBP13.4□□□□□ -0.26
VAMP1-204ENST00000535180 SUCLG2Q96I99 432 aa13.4□□□□□ -0.26
VAMP1-204ENST00000535180 DCDC2CA8MYV0 355 aa13.39□□□□□ -0.27
VAMP1-204ENST00000535180 ASNSP08243 561 aa13.39□□□□□ -0.27
VAMP1-204ENST00000535180 POU3F3P20264 500 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-204ENST00000535180 BTDP43251 543 aa13.39□□□□□ -0.27
VAMP1-204ENST00000535180 ZNF365Q70YC5 407 aa13.39□□□□□ -0.27
VAMP1-204ENST00000535180 DPP9Q86TI2 863 aa13.39□□□□□ -0.27
VAMP1-204ENST00000535180 SLF2Q8IX21 1173 aa13.39□□□□□ -0.27
VAMP1-204ENST00000535180 LPIN2Q92539 896 aa13.39□□□□□ -0.27
VAMP1-204ENST00000535180 A0A1W2PQ45 241 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-204ENST00000535180 A0A1W2PQY0 241 aa13.38□□□□□ -0.27
VAMP1-204ENST00000535180 FOXK2Q01167 660 aa13.38□□□□□ -0.27
VAMP1-204ENST00000535180 RABL6Q3YEC7 729 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-204ENST00000535180 PSRC1Q6PGN9 363 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-204ENST00000535180 ZGPATQ8N5A5 531 aaKnown RBP13.38□□□□□ -0.27
VAMP1-204ENST00000535180 FBXL18Q96ME1 805 aa13.38□□□□□ -0.27
VAMP1-204ENST00000535180 CD320Q9NPF0 282 aa13.38□□□□□ -0.27
VAMP1-204ENST00000535180 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
VAMP1-204ENST00000535180 GNL3LQ9NVN8 582 aaKnown RBP13.38□□□□□ -0.27
VAMP1-204ENST00000535180 HERC5Q9UII4 1024 aaKnown RBP13.38□□□□□ -0.27
VAMP1-204ENST00000535180 TBX21Q9UL17 535 aa13.38□□□□□ -0.27
VAMP1-204ENST00000535180 DENND2AQ9ULE3 1009 aa13.38□□□□□ -0.27
VAMP1-204ENST00000535180 YBX2Q9Y2T7 364 aaKnown RBP13.38□□□□□ -0.27
VAMP1-204ENST00000535180 USP34Q70CQ2 3546 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 A0A0G2JMZ2 1700 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 GPR75-ASB3A0A0A6YYF3 556 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 SEMA3EO15041 775 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 ALDH1L1O75891 902 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 CSF2RAP15509 400 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 RHBDL3P58872 404 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 PRAMEF19Q5SWL8 479 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 RNF180Q86T96 592 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 DZIP1Q86YF9 867 aaKnown RBP13.37□□□□□ -0.27
VAMP1-204ENST00000535180 KLHDC4Q8TBB5 520 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 MTCH2Q9Y6C9 303 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 ZNF521Q96K83 1311 aa13.37□□□□□ -0.27
VAMP1-204ENST00000535180 SPTBN4Q9H254 2564 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 STRNO43815 780 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 NBPF7P0C2Y1 421 aaPredicted RBP13.36□□□□□ -0.27
VAMP1-204ENST00000535180 ACRP10323 421 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 JAG1P78504 1218 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 NCBP3Q53F19 620 aaKnown RBP13.36□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L2Q6R6M4 530 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 TMEM199Q8N511 208 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 UIMC1Q96RL1 719 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 BICC1Q9H694 974 aaKnown RBP13.36□□□□□ -0.27
VAMP1-204ENST00000535180 XPNPEP3Q9NQH7 507 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 MROH7-TTC4A0A0A0MT08 1334 aa13.36□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L15C9J2P7 530 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L13C9JLJ4 530 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L11C9JVI0 530 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L18D6R9N7 530 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L22D6RA61 530 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L17D6RBQ6 530 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L19D6RCP7 530 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L20D6RJB6 530 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 ZBTB22O15209 634 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 GTPBP6O43824 516 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-204ENST00000535180 MAP4K4O95819 1239 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-204ENST00000535180 RARBP10826 455 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 ADORA2AP29274 412 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 USP17L24Q0WX57 530 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 PPP2R2DQ66LE6 453 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 LBX2Q6XYB7 198 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 ANKRD44Q8N8A2 993 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 HLA-CQ95604 372 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 MTIF3Q9H2K0 278 aaKnown RBP13.35□□□□□ -0.27
VAMP1-204ENST00000535180 GINM1Q9NU53 330 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 BTBD7Q9P203 1132 aa13.35□□□□□ -0.27
VAMP1-204ENST00000535180 FOCADQ5VW36 1801 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms