RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 PER1O15534 1290 aaPredicted RBP12.96□□□□□ -0.33
TNC-209ENST00000534839 CACNB2Q08289 660 aaPredicted RBP12.96□□□□□ -0.33
TNC-209ENST00000534839 PPP2R2DQ66LE6 453 aa12.96□□□□□ -0.33
TNC-209ENST00000534839 MICALL1Q8N3F8 863 aa12.96□□□□□ -0.33
TNC-209ENST00000534839 SMCR8Q8TEV9 937 aaPredicted RBP12.96□□□□□ -0.33
TNC-209ENST00000534839 PBX4Q9BYU1 374 aa12.96□□□□□ -0.33
TNC-209ENST00000534839 PDLIM7Q9NR12 457 aa12.96□□□□□ -0.33
TNC-209ENST00000534839 BSDC1Q9NW68 430 aaPredicted RBP12.96□□□□□ -0.33
TNC-209ENST00000534839 PDE8AO60658 829 aa12.95□□□□□ -0.34
TNC-209ENST00000534839 CYP2B6P20813 491 aa12.95□□□□□ -0.34
TNC-209ENST00000534839 ITGB8P26012 769 aa12.95□□□□□ -0.34
TNC-209ENST00000534839 FKBP1AP62942 108 aaKnown RBP12.95□□□□□ -0.34
TNC-209ENST00000534839 MIGA2Q7L4E1 593 aa12.95□□□□□ -0.34
TNC-209ENST00000534839 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
TNC-209ENST00000534839 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
TNC-209ENST00000534839 TSC1Q92574 1164 aa12.95□□□□□ -0.34
TNC-209ENST00000534839 ANKS1AQ92625 1134 aa12.95□□□□□ -0.34
TNC-209ENST00000534839 PLXNB2O15031 1838 aa12.95□□□□□ -0.34
TNC-209ENST00000534839 GRXCR1A8MXD5 290 aa12.94□□□□□ -0.34
TNC-209ENST00000534839 CXCL11O14625 94 aa12.94□□□□□ -0.34
TNC-209ENST00000534839 CACNB3P54284 484 aa12.94□□□□□ -0.34
TNC-209ENST00000534839 DESI1Q6ICB0 168 aa12.94□□□□□ -0.34
TNC-209ENST00000534839 PTCRAQ6ISU1 281 aaPredicted RBP12.94□□□□□ -0.34
TNC-209ENST00000534839 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
TNC-209ENST00000534839 ZNF341Q9BYN7 854 aa12.94□□□□□ -0.34
TNC-209ENST00000534839 SPEF2Q9C093 1822 aa12.94□□□□□ -0.34
TNC-209ENST00000534839 CHD9Q3L8U1 2897 aa12.93□□□□□ -0.34
TNC-209ENST00000534839 SLC19A1P41440 591 aa12.93□□□□□ -0.34
TNC-209ENST00000534839 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
TNC-209ENST00000534839 LYPD8Q6UX82 237 aa12.93□□□□□ -0.34
TNC-209ENST00000534839 GADL1Q6ZQY3 521 aa12.93□□□□□ -0.34
TNC-209ENST00000534839 CDC5LQ99459 802 aaKnown RBP12.93□□□□□ -0.34
TNC-209ENST00000534839 SLC45A1Q9Y2W3 748 aa12.93□□□□□ -0.34
TNC-209ENST00000534839 AK9Q5TCS8 1911 aa12.93□□□□□ -0.34
TNC-209ENST00000534839 FRMPD3Q5JV73 1810 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 A0A0G2JLL6 359 aaPredicted RBP12.92□□□□□ -0.34
TNC-209ENST00000534839 RGS20O76081 388 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 CTDSPL2Q05D32 466 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 FAM110CQ1W6H9 321 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 TRIM60Q495X7 471 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 DCAF15Q66K64 600 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 SLC39A5Q6ZMH5 540 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 CCDC129Q6ZRS4 1044 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 FASTKD5Q7L8L6 764 aaKnown RBP12.92□□□□□ -0.34
TNC-209ENST00000534839 PRRT2Q7Z6L0 340 aaPredicted RBP12.92□□□□□ -0.34
TNC-209ENST00000534839 COL26A1Q96A83 441 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 NUDT12Q9BQG2 462 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 SERPINA10Q9UK55 444 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 DAGLAQ9Y4D2 1042 aa12.92□□□□□ -0.34
TNC-209ENST00000534839 RPAP1Q9BWH6 1393 aaPredicted RBP12.92□□□□□ -0.34
TNC-209ENST00000534839 PLXNA1Q9UIW2 1896 aa12.91□□□□□ -0.34
TNC-209ENST00000534839 HSP90B1P14625 803 aaKnown RBP12.91□□□□□ -0.34
TNC-209ENST00000534839 RFC5P40937 340 aa12.91□□□□□ -0.34
TNC-209ENST00000534839 PTPRNQ16849 979 aa12.91□□□□□ -0.34
TNC-209ENST00000534839 ERMP1Q7Z2K6 904 aa12.91□□□□□ -0.34
TNC-209ENST00000534839 ZNF112Q9UJU3 913 aa12.91□□□□□ -0.34
TNC-209ENST00000534839 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
TNC-209ENST00000534839 SNAP23O00161 211 aa12.9□□□□□ -0.34
TNC-209ENST00000534839 CNGB1Q14028 1251 aaPredicted RBP12.9□□□□□ -0.34
TNC-209ENST00000534839 HERVK_113Q902F9 699 aa12.9□□□□□ -0.34
TNC-209ENST00000534839 HOOK2Q96ED9 719 aa12.9□□□□□ -0.34
TNC-209ENST00000534839 C5orf42Q9H799 3197 aa12.89□□□□□ -0.35
TNC-209ENST00000534839 DNM1LO00429 736 aa12.89□□□□□ -0.35
TNC-209ENST00000534839 GFRA3O60609 400 aa12.89□□□□□ -0.35
TNC-209ENST00000534839 CCNYL3P0C7X3 344 aa12.89□□□□□ -0.35
TNC-209ENST00000534839 IL1R1P14778 569 aa12.89□□□□□ -0.35
TNC-209ENST00000534839 CRKP46108 304 aa12.89□□□□□ -0.35
TNC-209ENST00000534839 NOL9Q5SY16 702 aaKnown RBP12.89□□□□□ -0.35
TNC-209ENST00000534839 RLFQ13129 1914 aa12.89□□□□□ -0.35
TNC-209ENST00000534839 XRCC5P13010 732 aaKnown RBP12.88□□□□□ -0.35
TNC-209ENST00000534839 ZKSCAN1P17029 563 aaPredicted RBP12.88□□□□□ -0.35
TNC-209ENST00000534839 FPGSQ05932 587 aa12.88□□□□□ -0.35
TNC-209ENST00000534839 SNX17Q15036 470 aa12.88□□□□□ -0.35
TNC-209ENST00000534839 CCL14Q16627 93 aa12.88□□□□□ -0.35
TNC-209ENST00000534839 GREM2Q9H772 168 aa12.88□□□□□ -0.35
TNC-209ENST00000534839 EVA1BQ9NVM1 165 aa12.88□□□□□ -0.35
TNC-209ENST00000534839 COG5Q9UP83 839 aa12.88□□□□□ -0.35
TNC-209ENST00000534839 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
TNC-209ENST00000534839 ZDBF2Q9HCK1 2354 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 AP1G2O75843 785 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 PCCAP05165 728 aaPredicted RBP12.87□□□□□ -0.35
TNC-209ENST00000534839 KCNJ4P48050 445 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 GJC2Q5T442 439 aaPredicted RBP12.87□□□□□ -0.35
TNC-209ENST00000534839 FAM83AQ86UY5 434 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 PRSS33Q8NF86 280 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 LPAR1Q92633 364 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.35
TNC-209ENST00000534839 ANKRD2Q9GZV1 360 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 NKX2-4Q9H2Z4 354 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 CHPF2Q9P2E5 772 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 TSPYL4Q9UJ04 414 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 ZHX2Q9Y6X8 837 aa12.87□□□□□ -0.35
TNC-209ENST00000534839 CTSWP56202 376 aa12.86□□□□□ -0.35
TNC-209ENST00000534839 CC2D1BQ5T0F9 858 aaKnown RBP12.86□□□□□ -0.35
TNC-209ENST00000534839 TTLL11Q8NHH1 800 aa12.86□□□□□ -0.35
TNC-209ENST00000534839 LRRN4Q8WUT4 740 aa12.86□□□□□ -0.35
TNC-209ENST00000534839 MAP10Q9P2G4 905 aa12.86□□□□□ -0.35
TNC-209ENST00000534839 AFG3L2Q9Y4W6 797 aa12.86□□□□□ -0.35
TNC-209ENST00000534839 CHD7Q9P2D1 2997 aa12.85□□□□□ -0.35
TNC-209ENST00000534839 CACNA1GO43497 2377 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms