RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PLXNB2O15031 1838 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 RAB11FIP3O75154 756 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 IDH1O75874 414 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 CACNB2Q08289 660 aaPredicted RBP12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 SPP2Q13103 211 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 PABPC4Q13310 644 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 PDE3AQ14432 1141 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 C20orf194Q5TEA3 1177 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 MAGEB6Q8N7X4 407 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 NUDT12Q9BQG2 462 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 RIOK1Q9BRS2 568 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 WDR18Q9BV38 432 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 GINM1Q9NU53 330 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 MUC3AQ02505 3323 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 CDH23Q9H251 3354 aa12.25□□□□□ -0.45
CLSTN3-203ENST00000534830 TMEM265A0A087WTH1 108 aa12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 HMMRO75330 724 aa12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 MYH7P12883 1935 aa12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 ZKSCAN1P17029 563 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 CCND3P30281 292 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 ATN1P54259 1190 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 HMGCS2P54868 508 aa12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 MAP3K12Q12852 859 aa12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 SHHQ15465 462 aa12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 SHROOM1Q2M3G4 852 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 LHX8Q68G74 356 aa12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 CLASRPQ8N2M8 674 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 MIGA1Q8NAN2 632 aa12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 ASCC2Q9H1I8 757 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 CHMP4BQ9H444 224 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-203ENST00000534830 TCRBV5S4A2TA0A5A2 114 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 ASNSP08243 561 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 XRCC5P13010 732 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 PLA2G5P39877 138 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 BACE1P56817 501 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 TTF1Q15361 905 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 TJAP1Q5JTD0 557 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 TATDN1Q6P1N9 297 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 TRMT44Q8IYL2 757 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 SOCS4Q8WXH5 440 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 FAM122AQ96E09 287 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 TTYH1Q9H313 450 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 AS3MTQ9HBK9 375 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 NAV1Q8NEY1 1877 aa12.23□□□□□ -0.45
CLSTN3-203ENST00000534830 HLA-DOAP06340 250 aa12.22□□□□□ -0.45
CLSTN3-203ENST00000534830 PDE6AP16499 860 aa12.22□□□□□ -0.45
CLSTN3-203ENST00000534830 C9orf50Q5SZB4 431 aa12.22□□□□□ -0.45
CLSTN3-203ENST00000534830 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-203ENST00000534830 EHD4Q9H223 541 aa12.22□□□□□ -0.45
CLSTN3-203ENST00000534830 SAP30BPQ9UHR5 308 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-203ENST00000534830 C19orf81C9J6K1 198 aa12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 PEX10O60683 326 aa12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 IFIT2P09913 472 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 ATP5JP18859 108 aa12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 USP5P45974 858 aa12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 PLCD1P51178 756 aa12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 IRX3P78415 501 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 SMAD3P84022 425 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 GABPAQ06546 454 aa12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 CCL14Q16627 93 aa12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 CRACR2BQ8N4Y2 399 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 MORF4L1Q9UBU8 362 aa12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 ZBTB21Q9ULJ3 1066 aa12.21□□□□□ -0.45
CLSTN3-203ENST00000534830 BAZ2AQ9UIF9 1905 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 MAGEB6P1A0A0J9YX57 407 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 USP17L10C9JJH3 530 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 APBB1O00213 710 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 GDF11O95390 407 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 RGS2P41220 211 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 RTP1P59025 263 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 MTMR2Q13614 643 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 SLC9C2Q5TAH2 1124 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 GPRC5AQ8NFJ5 357 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 EDC3Q96F86 508 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 PRDM5Q9NQX1 630 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 SERPINB13Q9UIV8 391 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 ATP11BQ9Y2G3 1177 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 LTBP2Q14767 1821 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 FRMPD3Q5JV73 1810 aa12.2□□□□□ -0.46
CLSTN3-203ENST00000534830 ZNF532Q9HCE3 1301 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 GOLIM4O00461 696 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 MAPK4P31152 587 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 SHMT1P34896 483 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 USP38Q8NB14 1042 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 C12orf42Q96LP6 360 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 HAUS7Q99871 368 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 BOLA2Q9H3K6 86 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 CWC22Q9HCG8 908 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 TXNRD2Q9NNW7 524 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 EMILIN3Q9NT22 766 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 MYH8P13535 1937 aa12.19□□□□□ -0.46
CLSTN3-203ENST00000534830 GH2P01242 217 aa12.18□□□□□ -0.46
CLSTN3-203ENST00000534830 CNGA1P29973 690 aa12.18□□□□□ -0.46
CLSTN3-203ENST00000534830 GUCY1A2P33402 732 aa12.18□□□□□ -0.46
CLSTN3-203ENST00000534830 ADD2P35612 726 aa12.18□□□□□ -0.46
CLSTN3-203ENST00000534830 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms