RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 VEZTQ9HBM0 779 aa11.79□□□□□ -0.52
RPS3-219ENST00000534440 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
RPS3-219ENST00000534440 PGAP2Q9UHJ9 254 aa11.79□□□□□ -0.52
RPS3-219ENST00000534440 SERPINB13Q9UIV8 391 aa11.79□□□□□ -0.52
RPS3-219ENST00000534440 NAP1L2Q9ULW6 460 aaPredicted RBP11.79□□□□□ -0.52
RPS3-219ENST00000534440 TRAF5O00463 557 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 AKR1B1P15121 316 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 LMOD1P29536 600 aaPredicted RBP11.78□□□□□ -0.52
RPS3-219ENST00000534440 FKBP1CQ5VVH2 108 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 METTL16Q86W50 562 aaKnown RBP11.78□□□□□ -0.52
RPS3-219ENST00000534440 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 CLEC10AQ8IUN9 316 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 NSUN7Q8NE18 718 aaKnown RBP11.78□□□□□ -0.52
RPS3-219ENST00000534440 FAM151AQ8WW52 585 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 ABHD8Q96I13 439 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 TMEM39BQ9GZU3 492 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 DHX36Q9H2U1 1008 aaKnown RBP11.78□□□□□ -0.52
RPS3-219ENST00000534440 MKNK2Q9HBH9 465 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
RPS3-219ENST00000534440 CHMP5Q9NZZ3 219 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 CIZ1Q9ULV3 898 aaPredicted RBP11.78□□□□□ -0.52
RPS3-219ENST00000534440 ABT1Q9ULW3 272 aaKnown RBP11.78□□□□□ -0.52
RPS3-219ENST00000534440 TLL2Q9Y6L7 1015 aa11.78□□□□□ -0.52
RPS3-219ENST00000534440 IGKV6D-41A0A0C4DH26 115 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 GOLGA8AA7E2F4 631 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 PPFIA3O75145 1194 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 GJB2P29033 226 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 CDC27P30260 824 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 MMP14P50281 582 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 HIRAP54198 1017 aaPredicted RBP11.77□□□□□ -0.53
RPS3-219ENST00000534440 RRP1BQ14684 758 aaKnown RBP11.77□□□□□ -0.53
RPS3-219ENST00000534440 SART3Q15020 963 aaKnown RBP11.77□□□□□ -0.53
RPS3-219ENST00000534440 CYP4F22Q6NT55 531 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 NFXL1Q6ZNB6 911 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 IQCA1Q86XH1 822 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 ZSCAN29Q8IWY8 852 aaPredicted RBP11.77□□□□□ -0.53
RPS3-219ENST00000534440 CCDC144CPQ8IYA2 1237 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 ZNF654Q8IZM8 581 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 NEDD1Q8NHV4 660 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 SMARCC2Q8TAQ2 1214 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 CAPNS2Q96L46 248 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 ADARB2Q9NS39 739 aaKnown RBP11.77□□□□□ -0.53
RPS3-219ENST00000534440 SWAP70Q9UH65 585 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 ZDHHC9Q9Y397 364 aa11.77□□□□□ -0.53
RPS3-219ENST00000534440 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.77□□□□□ -0.53
RPS3-219ENST00000534440 ERICH2A1L162 156 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 PTPDC1A2A3K4 754 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 CCDC69A6NI79 296 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 ZBTB43O43298 467 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 TSPY3P0CV98 308 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 TSPY8P0CW00 308 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 NT5C2P49902 561 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 METAP2P50579 478 aaKnown RBP eCLIP11.76□□□□□ -0.537e-13■■□□□ 12.9
RPS3-219ENST00000534440 JAG1P78504 1218 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 RAB3GAP1Q15042 981 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 IFIT1BQ5T764 474 aaKnown RBP11.76□□□□□ -0.53
RPS3-219ENST00000534440 RASGRP2Q7LDG7 609 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 SAPCD2Q86UD0 394 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 FAM83AQ86UY5 434 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 ZNF444Q8N0Y2 327 aaPredicted RBP11.76□□□□□ -0.53
RPS3-219ENST00000534440 CSRNP1Q96S65 589 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 CWC22Q9HCG8 908 aaKnown RBP11.76□□□□□ -0.53
RPS3-219ENST00000534440 TCP11L1Q9NUJ3 509 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 PI4KBQ9UBF8 816 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 SMC3Q9UQE7 1217 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 SLC12A7Q9Y666 1083 aa11.76□□□□□ -0.53
RPS3-219ENST00000534440 MYO1BO43795 1136 aa11.75□□□□□ -0.53
RPS3-219ENST00000534440 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
RPS3-219ENST00000534440 MAP2K2P36507 400 aa11.75□□□□□ -0.53
RPS3-219ENST00000534440 NOVP48745 357 aa11.75□□□□□ -0.53
RPS3-219ENST00000534440 TATDN1Q6P1N9 297 aa11.75□□□□□ -0.53
RPS3-219ENST00000534440 CRACR2BQ8N4Y2 399 aaPredicted RBP11.75□□□□□ -0.53
RPS3-219ENST00000534440 ANKS1AQ92625 1134 aa11.75□□□□□ -0.53
RPS3-219ENST00000534440 CEP95Q96GE4 821 aa11.75□□□□□ -0.53
RPS3-219ENST00000534440 TEPSINQ96N21 525 aa11.75□□□□□ -0.53
RPS3-219ENST00000534440 LLPHQ9BRT6 129 aaKnown RBP11.75□□□□□ -0.53
RPS3-219ENST00000534440 ZNF287Q9HBT7 754 aa11.75□□□□□ -0.53
RPS3-219ENST00000534440 SSC5DA1L4H1 1573 aa11.75□□□□□ -0.53
RPS3-219ENST00000534440 H7C1D1 291 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 AOC2O75106 756 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 DDAH1O94760 285 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 GDF11O95390 407 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 FDPSP14324 419 aaKnown RBP11.74□□□□□ -0.53
RPS3-219ENST00000534440 ECE1P42892 770 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 RCAN1P53805 252 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 TROAPQ12815 778 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 RASA3Q14644 834 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 NTRK3Q16288 839 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 RTN1Q16799 776 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 ANGEL2Q5VTE6 544 aaKnown RBP11.74□□□□□ -0.53
RPS3-219ENST00000534440 DGKHQ86XP1 1220 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
RPS3-219ENST00000534440 NUP133Q8WUM0 1156 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 DDX11Q96FC9 970 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 HHIPL1Q96JK4 782 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 GGA3Q9NZ52 723 aa11.74□□□□□ -0.53
RPS3-219ENST00000534440 UBE2Q2LH0YL09 131 aa11.73□□□□□ -0.53
RPS3-219ENST00000534440 PLEKHA8P1O95397 391 aa11.73□□□□□ -0.53
RPS3-219ENST00000534440 BRD1O95696 1058 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms