RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 WDR63Q8IWG1 891 aa11.54□□□□□ -0.56
SOX9-AS1-213ENST00000533996 PTCD2Q8WV60 388 aaKnown RBP11.54□□□□□ -0.56
SOX9-AS1-213ENST00000533996 FAM122AQ96E09 287 aa11.54□□□□□ -0.56
SOX9-AS1-213ENST00000533996 P2RX7Q99572 595 aaKnown RBP11.54□□□□□ -0.56
SOX9-AS1-213ENST00000533996 APBA2Q99767 749 aa11.54□□□□□ -0.56
SOX9-AS1-213ENST00000533996 TMOD4Q9NZQ9 345 aa11.54□□□□□ -0.56
SOX9-AS1-213ENST00000533996 HERC5Q9UII4 1024 aaKnown RBP11.54□□□□□ -0.56
SOX9-AS1-213ENST00000533996 PDS5AQ29RF7 1337 aaKnown RBP11.54□□□□□ -0.56
SOX9-AS1-213ENST00000533996 GLRX3O76003 335 aaKnown RBP11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 BACE1P56817 501 aa11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 RTP1P59025 263 aa11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 ERVK-9P63128 1117 aa11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 ERVK-24P63145 666 aa11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 MFSD14CQ5VZR4 134 aa11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 DZIP1Q86YF9 867 aaKnown RBP11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 KLHDC4Q8TBB5 520 aa11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 EDC3Q96F86 508 aaKnown RBP11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 RBPJLQ9UBG7 517 aa11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 DDX20Q9UHI6 824 aaKnown RBP11.53□□□□□ -0.56
SOX9-AS1-213ENST00000533996 CDH23Q9H251 3354 aa11.52□□□□□ -0.56
SOX9-AS1-213ENST00000533996 GPR75-ASB3A0A0A6YYF3 556 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 SLURP2P0DP57 97 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 BTDP43251 543 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 MAP2K5Q13163 448 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 CCL14Q16627 93 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 Q3C1V9 767 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 C9orf50Q5SZB4 431 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 SLC39A5Q6ZMH5 540 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ARRDC4Q8NCT1 418 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ATXN2LQ8WWM7 1075 aaKnown RBP11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 TXNRD2Q9NNW7 524 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 GINM1Q9NU53 330 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 MROH7-TTC4A0A0A0MT08 1334 aa11.52□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ASNSP08243 561 aa11.51□□□□□ -0.57
SOX9-AS1-213ENST00000533996 RFX5P48382 616 aaPredicted RBP11.51□□□□□ -0.57
SOX9-AS1-213ENST00000533996 RHBDL3P58872 404 aa11.51□□□□□ -0.57
SOX9-AS1-213ENST00000533996 SNX17Q15036 470 aa11.51□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ATP2B3Q16720 1220 aa11.51□□□□□ -0.57
SOX9-AS1-213ENST00000533996 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ATG9AQ7Z3C6 839 aa11.51□□□□□ -0.57
SOX9-AS1-213ENST00000533996 CEP126Q9P2H0 1117 aa11.51□□□□□ -0.57
SOX9-AS1-213ENST00000533996 USP17L10C9JJH3 530 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 CIAO1O76071 339 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 LDHCP07864 332 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 HOXC6P09630 235 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 CCNA1P78396 465 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 MTMR2Q13614 643 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 BADQ92934 168 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 PORCNQ9H237 461 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 PI4KBQ9UBF8 816 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ATP11BQ9Y2G3 1177 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 RABGAP1Q9Y3P9 1069 aa11.5□□□□□ -0.57
SOX9-AS1-213ENST00000533996 SLC15A5A6NIM6 579 aa11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 FAM196BA6NMK8 535 aa11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 PHKA1P46020 1223 aa11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 GSTO1P78417 241 aa11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ATP2B2Q01814 1243 aa11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 MAMSTRQ6ZN01 415 aa11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ERICH6Q7L0X2 663 aa11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 USP44Q9H0E7 712 aa11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 DHX36Q9H2U1 1008 aaKnown RBP11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ABCF2Q9UG63 623 aa11.49□□□□□ -0.57
SOX9-AS1-213ENST00000533996 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 GRXCR2A6NFK2 248 aa11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 KBTBD13C9JR72 458 aa11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 PTPREP23469 700 aa11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 CNGA1P29973 690 aa11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 RRP1BQ14684 758 aaKnown RBP11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 SCUBE2Q9NQ36 999 aa11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 PRDM5Q9NQX1 630 aaPredicted RBP11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 PDLIM7Q9NR12 457 aa11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 TACC3Q9Y6A5 838 aa11.48□□□□□ -0.57
SOX9-AS1-213ENST00000533996 IGHA2P01877 340 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 IL15P40933 162 aaPredicted RBP11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 MECOMQ03112 1051 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 MAP3K12Q12852 859 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 GRIN2CQ14957 1233 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 AKNAD1Q5T1N1 836 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 METTL16Q86W50 562 aaKnown RBP11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 FOXP4Q8IVH2 680 aaPredicted RBP11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 RNPC3Q96LT9 517 aaKnown RBP11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ASB2Q96Q27 587 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 PAGR1Q9BTK6 254 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 FLRT1Q9NZU1 646 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 RAPGEFL1Q9UHV5 662 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 IVNS1ABPQ9Y6Y0 642 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 TTC28Q96AY4 2481 aa11.47□□□□□ -0.57
SOX9-AS1-213ENST00000533996 PTPRCP08575 1304 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 SYNGAP1Q96PV0 1343 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 TRIM43BA6NCK2 446 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 PEX10O60683 326 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 CYBAP13498 195 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 DNAJB2P25686 324 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 MRPS5P82675 430 aaKnown RBP11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 RASGRF1Q13972 1273 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms