RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 PHF20Q9BVI0 1012 aa32.8■■■□□ 2.84
SAMD1-202ENST00000533683 ALDH1B1P30837 517 aa32.8■■■□□ 2.84
SAMD1-202ENST00000533683 RHBDL3P58872 404 aa32.8■■■□□ 2.84
SAMD1-202ENST00000533683 C11orf57Q6ZUT1 292 aaPredicted RBP32.8■■■□□ 2.84
SAMD1-202ENST00000533683 MPNDQ8N594 471 aa32.8■■■□□ 2.84
SAMD1-202ENST00000533683 RXRBP28702 533 aa32.79■■■□□ 2.84
SAMD1-202ENST00000533683 CLIC6Q96NY7 704 aa32.79■■■□□ 2.84
SAMD1-202ENST00000533683 ANKS1AQ92625 1134 aa32.79■■■□□ 2.84
SAMD1-202ENST00000533683 KAT14Q9H8E8 782 aa32.79■■■□□ 2.84
SAMD1-202ENST00000533683 HPSEQ9Y251 543 aa32.79■■■□□ 2.84
SAMD1-202ENST00000533683 COL11A2P13942 1736 aaPredicted RBP32.78■■■□□ 2.84
SAMD1-202ENST00000533683 MSL1Q68DK7 614 aa32.78■■■□□ 2.84
SAMD1-202ENST00000533683 A0A087WWV3 80 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 CUTAO60888 179 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 ZC3H12CQ9C0D7 883 aaKnown RBP32.77■■■□□ 2.84
SAMD1-202ENST00000533683 FLT1P17948 1338 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 FAM237AA0A1B0GTK4 181 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 USP17L3A6NCW0 530 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 USP17L4A6NCW7 530 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 IQCB1Q15051 598 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 RESP18Q5W5W9 173 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 USP17L1Q7RTZ2 530 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 ZNF444Q8N0Y2 327 aaPredicted RBP32.77■■■□□ 2.84
SAMD1-202ENST00000533683 ANO10Q9NW15 660 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 KIAA1468Q9P260 1216 aa32.77■■■□□ 2.84
SAMD1-202ENST00000533683 TSPY3P0CV98 308 aa32.76■■■□□ 2.84
SAMD1-202ENST00000533683 TSPY8P0CW00 308 aa32.76■■■□□ 2.84
SAMD1-202ENST00000533683 MASTLQ96GX5 879 aa32.76■■■□□ 2.84
SAMD1-202ENST00000533683 CABP5Q9NP86 173 aa32.76■■■□□ 2.84
SAMD1-202ENST00000533683 TCP11L1Q9NUJ3 509 aa32.76■■■□□ 2.84
SAMD1-202ENST00000533683 DDX60LQ5H9U9 1706 aaKnown RBP32.76■■■□□ 2.83
SAMD1-202ENST00000533683 BAZ2BQ9UIF8 2168 aaKnown RBP32.76■■■□□ 2.83
SAMD1-202ENST00000533683 RASA1P20936 1047 aa32.76■■■□□ 2.83
SAMD1-202ENST00000533683 SYKP43405 635 aa32.76■■■□□ 2.83
SAMD1-202ENST00000533683 DPP8Q6V1X1 898 aaPredicted RBP32.76■■■□□ 2.83
SAMD1-202ENST00000533683 PCDHB6Q9Y5E3 794 aa32.76■■■□□ 2.83
SAMD1-202ENST00000533683 KRI1Q8N9T8 703 aaKnown RBP32.75■■■□□ 2.83
SAMD1-202ENST00000533683 PNMA1Q8ND90 353 aa32.75■■■□□ 2.83
SAMD1-202ENST00000533683 DAGLAQ9Y4D2 1042 aa32.75■■■□□ 2.83
SAMD1-202ENST00000533683 KIF5BP33176 963 aa32.75■■■□□ 2.83
SAMD1-202ENST00000533683 KRT2P35908 639 aa32.75■■■□□ 2.83
SAMD1-202ENST00000533683 CCDC178Q5BJE1 867 aa32.75■■■□□ 2.83
SAMD1-202ENST00000533683 TIGD1Q96MW7 591 aa32.75■■■□□ 2.83
SAMD1-202ENST00000533683 C16orf86Q6ZW13 317 aa32.73■■■□□ 2.83
SAMD1-202ENST00000533683 CERS5Q8N5B7 392 aa32.73■■■□□ 2.83
SAMD1-202ENST00000533683 FBXW7Q969H0 707 aa32.73■■■□□ 2.83
SAMD1-202ENST00000533683 ZNF287Q9HBT7 754 aa32.73■■■□□ 2.83
SAMD1-202ENST00000533683 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP32.73■■■□□ 2.831e-7■■□□□ 12.9
SAMD1-202ENST00000533683 FAM205CA6NFA0 338 aa32.72■■■□□ 2.83
SAMD1-202ENST00000533683 CDK8P49336 464 aa32.72■■■□□ 2.83
SAMD1-202ENST00000533683 NPY5RQ15761 445 aa32.72■■■□□ 2.83
SAMD1-202ENST00000533683 SUGT1Q9Y2Z0 365 aa32.72■■■□□ 2.83
SAMD1-202ENST00000533683 TNS1Q9HBL0 1735 aaKnown RBP32.72■■■□□ 2.83
SAMD1-202ENST00000533683 DOK7Q18PE1 504 aa32.72■■■□□ 2.83
SAMD1-202ENST00000533683 EARS2Q5JPH6 523 aaKnown RBP32.72■■■□□ 2.83
SAMD1-202ENST00000533683 FBXO2Q9UK22 296 aaPredicted RBP32.72■■■□□ 2.83
SAMD1-202ENST00000533683 MYH1P12882 1939 aa32.72■■■□□ 2.83
SAMD1-202ENST00000533683 SCG2P13521 617 aa32.71■■■□□ 2.83
SAMD1-202ENST00000533683 ATP2B1P20020 1258 aa32.71■■■□□ 2.83
SAMD1-202ENST00000533683 PTPREP23469 700 aa32.7■■■□□ 2.83
SAMD1-202ENST00000533683 ZNF500O60304 480 aaPredicted RBP32.7■■■□□ 2.83
SAMD1-202ENST00000533683 PFKFB3Q16875 520 aaPredicted RBP32.7■■■□□ 2.83
SAMD1-202ENST00000533683 ZNF622Q969S3 477 aaKnown RBP eCLIP32.7■■■□□ 2.835e-8■■□□□ 12.8
SAMD1-202ENST00000533683 F8W031 263 aaPredicted RBP32.69■■■□□ 2.82
SAMD1-202ENST00000533683 VEGFAP15692 232 aaPredicted RBP32.69■■■□□ 2.82
SAMD1-202ENST00000533683 CEP57L1Q8IYX8 460 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 STAG2Q8N3U4 1231 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 PIBF1Q8WXW3 757 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 TNFRSF25Q93038 417 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 TMX4Q9H1E5 349 aaPredicted RBP32.69■■■□□ 2.82
SAMD1-202ENST00000533683 CEP131Q9UPN4 1083 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 SNED1Q8TER0 1413 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 GRIN1Q05586 938 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 GRM4Q14833 912 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 EYA3Q99504 573 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 BRMS1Q9HCU9 246 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 KCNH3Q9ULD8 1083 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 FOCADQ5VW36 1801 aa32.69■■■□□ 2.82
SAMD1-202ENST00000533683 DHX40Q8IX18 779 aaKnown RBP32.68■■■□□ 2.82
SAMD1-202ENST00000533683 TMEM47Q9BQJ4 181 aa32.68■■■□□ 2.82
SAMD1-202ENST00000533683 MXD3Q9BW11 206 aa32.68■■■□□ 2.82
SAMD1-202ENST00000533683 STX8Q9UNK0 236 aa32.68■■■□□ 2.82
SAMD1-202ENST00000533683 GOLGA6L19H0YKK7 550 aa32.68■■■□□ 2.82
SAMD1-202ENST00000533683 SPECC1Q5M775 1068 aa32.68■■■□□ 2.82
SAMD1-202ENST00000533683 ZNF830Q96NB3 372 aaPredicted RBP32.68■■■□□ 2.82
SAMD1-202ENST00000533683 MAD2L2Q9UI95 211 aa32.68■■■□□ 2.82
SAMD1-202ENST00000533683 TTF2Q9UNY4 1162 aaKnown RBP32.67■■■□□ 2.82
SAMD1-202ENST00000533683 TRIM75PA6NK02 468 aa32.66■■■□□ 2.82
SAMD1-202ENST00000533683 C2CD5Q86YS7 1000 aa32.66■■■□□ 2.82
SAMD1-202ENST00000533683 TRIM5Q9C035 493 aa32.66■■■□□ 2.82
SAMD1-202ENST00000533683 SRPRBQ9Y5M8 271 aaKnown RBP32.66■■■□□ 2.82
SAMD1-202ENST00000533683 ZRSR1Q15695 479 aaKnown RBP32.66■■■□□ 2.82
SAMD1-202ENST00000533683 DPCR1Q3MIW9 517 aa32.66■■■□□ 2.82
SAMD1-202ENST00000533683 PLA2G4DQ86XP0 818 aa32.66■■■□□ 2.82
SAMD1-202ENST00000533683 SPC24Q8NBT2 197 aa32.66■■■□□ 2.82
SAMD1-202ENST00000533683 NEDD1Q8NHV4 660 aa32.66■■■□□ 2.82
SAMD1-202ENST00000533683 NAT10Q9H0A0 1025 aaKnown RBP32.66■■■□□ 2.82
SAMD1-202ENST00000533683 QSER1Q2KHR3 1735 aa32.65■■■□□ 2.82
SAMD1-202ENST00000533683 ZNF75DP51815 510 aa32.65■■■□□ 2.82
SAMD1-202ENST00000533683 NOM1Q5C9Z4 860 aaKnown RBP32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms