RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	CYP2D7	A0A087X1C5	515 aa		21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	SMIM22	K7EJ46	135 aa		21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	TNPO2	O14787	897 aa	Known RBP	21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	USP14	P54578	494 aa		21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	SEPT2	Q15019	361 aa		21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	CTR9	Q6PD62	1173 aa		21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	AMOTL1	Q8IY63	956 aa		21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	RAET1E	Q8TD07	263 aa		21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	P2RX7	Q99572	595 aa	Known RBP	21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	KIAA0100	Q14667	2235 aa	Known RBP	21.25	■□□□□ 0.99
BBS1-223	ENST00000533644	MYH8	P13535	1937 aa		21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	HERVK_113	P62684	666 aa		21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	LRRFIP1	Q32MZ4	808 aa	Known RBP	21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	GIMAP6	Q6P9H5	292 aa		21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	TMEM179	Q6ZVK1	233 aa		21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	C16orf86	Q6ZW13	317 aa		21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	ARPP21	Q9UBL0	812 aa	Predicted RBP	21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	ZBTB47	Q9UFB7	747 aa	Predicted RBP	21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	STAP2	Q9UGK3	403 aa		21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	GABRQ	Q9UN88	632 aa		21.24	■□□□□ 0.99
BBS1-223	ENST00000533644	GSG1L2	A8MUP6	293 aa		21.23	■□□□□ 0.99
BBS1-223	ENST00000533644	GPAA1	O43292	621 aa		21.23	■□□□□ 0.99
BBS1-223	ENST00000533644	GRK4	P32298	578 aa		21.23	■□□□□ 0.99
BBS1-223	ENST00000533644	ZYX	Q15942	572 aa	Known RBP	21.23	■□□□□ 0.99
BBS1-223	ENST00000533644	SMC5	Q8IY18	1101 aa		21.23	■□□□□ 0.99
BBS1-223	ENST00000533644		A0A1W2PRG0	241 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644		M0R2C6	588 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	MPHOSPH10	O00566	681 aa	Known RBP	21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	AKR1B1	P15121	316 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	VCAM1	P19320	739 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	CDK8	P49336	464 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	FLT3LG	P49771	235 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	IRF5	Q13568	498 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	SBK1	Q52WX2	424 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	EXOC6	Q8TAG9	804 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	GTF3C2	Q8WUA4	911 aa	Predicted RBP	21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	CCDC17	Q96LX7	622 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	FSD1	Q9BTV5	496 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	TMEM106C	Q9BVX2	250 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	TXNRD2	Q9NNW7	524 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	ROBO3	Q96MS0	1386 aa		21.22	■□□□□ 0.99
BBS1-223	ENST00000533644	USP17L15	C9J2P7	530 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	USP17L13	C9JLJ4	530 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	USP17L11	C9JVI0	530 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	USP17L18	D6R9N7	530 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	USP17L22	D6RA61	530 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	USP17L17	D6RBQ6	530 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	USP17L19	D6RCP7	530 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	USP17L20	D6RJB6	530 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	GNAT2	P19087	354 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	PDE1A	P54750	535 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	USP17L24	Q0WX57	530 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	POTEE	Q6S8J3	1075 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	SLAIN1	Q8ND83	568 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	COA7	Q96BR5	231 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	RWDD1	Q9H446	243 aa	Predicted RBP	21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	RBPJL	Q9UBG7	517 aa		21.21	■□□□□ 0.99
BBS1-223	ENST00000533644	ZMYM1	Q5SVZ6	1142 aa		21.2	■□□□□ 0.98
BBS1-223	ENST00000533644	CATSPERG	Q6ZRH7	1159 aa		21.2	■□□□□ 0.98
BBS1-223	ENST00000533644	GPRC5A	Q8NFJ5	357 aa		21.2	■□□□□ 0.98
BBS1-223	ENST00000533644	EN2	P19622	333 aa	Predicted RBP	21.19	■□□□□ 0.98
BBS1-223	ENST00000533644	SIAH1	Q8IUQ4	282 aa		21.19	■□□□□ 0.98
BBS1-223	ENST00000533644	PXYLP1	Q8TE99	480 aa		21.19	■□□□□ 0.98
BBS1-223	ENST00000533644	DOCK3	Q8IZD9	2030 aa		21.19	■□□□□ 0.98
BBS1-223	ENST00000533644	GREB1L	Q9C091	1923 aa	Predicted RBP	21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	ADCY3	O60266	1144 aa		21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	PEX10	O60683	326 aa		21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	MYC	P01106	439 aa	Predicted RBP	21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	ICA1	Q05084	483 aa		21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	MTFR1	Q15390	333 aa		21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	LBX2	Q6XYB7	198 aa		21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	CLEC10A	Q8IUN9	316 aa		21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	SEC62	Q99442	399 aa	Known RBP	21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	SUPT16H	Q9Y5B9	1047 aa	Known RBP	21.18	■□□□□ 0.98
BBS1-223	ENST00000533644	IGHD	P01880	384 aa		21.17	■□□□□ 0.98
BBS1-223	ENST00000533644	ERVK-9	P63128	1117 aa		21.17	■□□□□ 0.98
BBS1-223	ENST00000533644	ERVK-24	P63145	666 aa		21.17	■□□□□ 0.98
BBS1-223	ENST00000533644	EVI5L	Q96CN4	794 aa		21.17	■□□□□ 0.98
BBS1-223	ENST00000533644	LNPK	Q9C0E8	428 aa		21.17	■□□□□ 0.98
BBS1-223	ENST00000533644	RPAP3	Q9H6T3	665 aa	Predicted RBP	21.17	■□□□□ 0.98
BBS1-223	ENST00000533644	GJD2	Q9UKL4	321 aa		21.17	■□□□□ 0.98
BBS1-223	ENST00000533644	TMX2	Q9Y320	296 aa		21.17	■□□□□ 0.98
BBS1-223	ENST00000533644	PLXNB2	O15031	1838 aa		21.16	■□□□□ 0.98
BBS1-223	ENST00000533644	PATL2	C9JE40	543 aa	Known RBP	21.16	■□□□□ 0.98
BBS1-223	ENST00000533644	CNMD	O75829	334 aa		21.16	■□□□□ 0.98
BBS1-223	ENST00000533644	ELN	P15502	786 aa		21.16	■□□□□ 0.98
BBS1-223	ENST00000533644	LPAR1	Q92633	364 aa		21.16	■□□□□ 0.98
BBS1-223	ENST00000533644	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	21.16	■□□□□ 0.98
BBS1-223	ENST00000533644	SH2D4A	Q9H788	454 aa		21.16	■□□□□ 0.98
BBS1-223	ENST00000533644	ARHGEF10L	Q9HCE6	1279 aa		21.16	■□□□□ 0.98
BBS1-223	ENST00000533644	RABGAP1	Q9Y3P9	1069 aa		21.16	■□□□□ 0.98
BBS1-223	ENST00000533644	SPDYE16	A6NNV3	312 aa	Predicted RBP	21.15	■□□□□ 0.98
BBS1-223	ENST00000533644	MINDY4B	A8MYZ0	360 aa		21.15	■□□□□ 0.98
BBS1-223	ENST00000533644	RASA1	P20936	1047 aa		21.15	■□□□□ 0.98
BBS1-223	ENST00000533644	MAPK4	P31152	587 aa		21.15	■□□□□ 0.98
BBS1-223	ENST00000533644	TDO2	P48775	406 aa		21.15	■□□□□ 0.98
BBS1-223	ENST00000533644	UBXN2A	P68543	259 aa		21.15	■□□□□ 0.98
BBS1-223	ENST00000533644		Q3C1V9	767 aa		21.15	■□□□□ 0.98
BBS1-223	ENST00000533644	KIAA1755	Q5JYT7	1200 aa		21.15	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms