RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 GDF11O95390 407 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 CYP2E1P05181 493 aaPredicted RBP10.58□□□□□ -0.72
COPB1-210ENST00000533533 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
COPB1-210ENST00000533533 MAPK4P31152 587 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 SHROOM1Q2M3G4 852 aaPredicted RBP10.58□□□□□ -0.72
COPB1-210ENST00000533533 Q3C1V9 767 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 TRMT44Q8IYL2 757 aaKnown RBP10.58□□□□□ -0.72
COPB1-210ENST00000533533 CRACR2BQ8N4Y2 399 aaPredicted RBP10.58□□□□□ -0.72
COPB1-210ENST00000533533 EXOC6Q8TAG9 804 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 EAF2Q96CJ1 260 aaPredicted RBP10.58□□□□□ -0.72
COPB1-210ENST00000533533 TRIM34Q9BYJ4 488 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 TLR7Q9NYK1 1049 aaKnown RBP10.58□□□□□ -0.72
COPB1-210ENST00000533533 RBPJLQ9UBG7 517 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 PALD1Q9ULE6 856 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 ZBTB21Q9ULJ3 1066 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 PCDHB15Q9Y5E8 787 aa10.58□□□□□ -0.72
COPB1-210ENST00000533533 DLL1O00548 723 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 SMARCA5O60264 1052 aaPredicted RBP10.57□□□□□ -0.72
COPB1-210ENST00000533533 IGSF3O75054 1194 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 ZKSCAN1P17029 563 aaPredicted RBP10.57□□□□□ -0.72
COPB1-210ENST00000533533 SYN1P17600 705 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 MAGEA10P43363 369 aaPredicted RBP10.57□□□□□ -0.72
COPB1-210ENST00000533533 ERVK-9P63128 1117 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 ERVK-24P63145 666 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 CACNB2Q08289 660 aaPredicted RBP10.57□□□□□ -0.72
COPB1-210ENST00000533533 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
COPB1-210ENST00000533533 GTF3C2Q8WUA4 911 aaPredicted RBP10.57□□□□□ -0.72
COPB1-210ENST00000533533 USP6NLQ92738 828 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 ZNF512BQ96KM6 892 aaPredicted RBP10.57□□□□□ -0.72
COPB1-210ENST00000533533 LRRCC1Q9C099 1032 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 PORCNQ9H237 461 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
COPB1-210ENST00000533533 DBNLQ9UJU6 430 aaKnown RBP10.57□□□□□ -0.72
COPB1-210ENST00000533533 TTC28Q96AY4 2481 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 PFASO15067 1338 aa10.57□□□□□ -0.72
COPB1-210ENST00000533533 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 HLA-DOAP06340 250 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 COL6A1P12109 1028 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 RGS2P41220 211 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 LRIT3Q3SXY7 679 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 MORN1Q5T089 497 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 USP17L2Q6R6M4 530 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 POTEEQ6S8J3 1075 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 GPR142Q7Z601 462 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 TDHQ8IZJ6 230 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 DEFB123Q8N688 67 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 PAGR1Q9BTK6 254 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 PIH1D3Q9NQM4 214 aaKnown RBP10.56□□□□□ -0.72
COPB1-210ENST00000533533 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
COPB1-210ENST00000533533 SAP30BPQ9UHR5 308 aaKnown RBP10.56□□□□□ -0.72
COPB1-210ENST00000533533 GH2P01242 217 aa10.55□□□□□ -0.72
COPB1-210ENST00000533533 CCND3P30281 292 aaPredicted RBP10.55□□□□□ -0.72
COPB1-210ENST00000533533 ZAP70P43403 619 aa10.55□□□□□ -0.72
COPB1-210ENST00000533533 DYNLL1P63167 89 aaKnown RBP10.55□□□□□ -0.72
COPB1-210ENST00000533533 MKRN4PQ13434 485 aaPredicted RBP10.55□□□□□ -0.72
COPB1-210ENST00000533533 CCL14Q16627 93 aa10.55□□□□□ -0.72
COPB1-210ENST00000533533 LHX8Q68G74 356 aa10.55□□□□□ -0.72
COPB1-210ENST00000533533 PLEKHH3Q7Z736 793 aa10.55□□□□□ -0.72
COPB1-210ENST00000533533 APBA2Q99767 749 aa10.55□□□□□ -0.72
COPB1-210ENST00000533533 UBE2OQ9C0C9 1292 aaKnown RBP10.55□□□□□ -0.72
COPB1-210ENST00000533533 RABGAP1Q9Y3P9 1069 aa10.55□□□□□ -0.72
COPB1-210ENST00000533533 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
COPB1-210ENST00000533533 CYP7A1P22680 504 aa10.54□□□□□ -0.72
COPB1-210ENST00000533533 MYO9BQ13459 2157 aa10.54□□□□□ -0.72
COPB1-210ENST00000533533 TATDN1Q6P1N9 297 aa10.54□□□□□ -0.72
COPB1-210ENST00000533533 C12orf42Q96LP6 360 aa10.54□□□□□ -0.72
COPB1-210ENST00000533533 DCTPP1Q9H773 170 aa10.54□□□□□ -0.72
COPB1-210ENST00000533533 USP17L15C9J2P7 530 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 USP17L13C9JLJ4 530 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 USP17L11C9JVI0 530 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 USP17L18D6R9N7 530 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 USP17L22D6RA61 530 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 USP17L17D6RBQ6 530 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 USP17L19D6RCP7 530 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 USP17L20D6RJB6 530 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 CNMDO75829 334 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 IDH1O75874 414 aaKnown RBP10.53□□□□□ -0.72
COPB1-210ENST00000533533 GLRX3O76003 335 aaKnown RBP10.53□□□□□ -0.72
COPB1-210ENST00000533533 CCNA1P78396 465 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 USP17L24Q0WX57 530 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 MAP2K5Q13163 448 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 AAMPQ13685 434 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 ZYXQ15942 572 aaKnown RBP10.53□□□□□ -0.72
COPB1-210ENST00000533533 LRRC26Q2I0M4 334 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 CATSPERGQ6ZRH7 1159 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 Q7L0L9 218 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 CERS3Q8IU89 383 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 MIGA1Q8NAN2 632 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 EDC3Q96F86 508 aaKnown RBP10.53□□□□□ -0.72
COPB1-210ENST00000533533 DNAJC2Q99543 621 aaKnown RBP10.53□□□□□ -0.72
COPB1-210ENST00000533533 FEZ1Q99689 392 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 EHD4Q9H223 541 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 CWC22Q9HCG8 908 aaKnown RBP10.53□□□□□ -0.72
COPB1-210ENST00000533533 SERPINB13Q9UIV8 391 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 NDUFB9Q9Y6M9 179 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 VCANP13611 3396 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 SMCHD1A6NHR9 2005 aa10.53□□□□□ -0.72
COPB1-210ENST00000533533 NCOR1O75376 2440 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 SLC15A5A6NIM6 579 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms