RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 NPLOC4Q8TAT6 608 aa11.41□□□□□ -0.58
CTSB-227ENST00000533110 NOL10Q9BSC4 688 aaKnown RBP11.41□□□□□ -0.58
CTSB-227ENST00000533110 PRDM12Q9H4Q4 367 aa11.41□□□□□ -0.58
CTSB-227ENST00000533110 GINM1Q9NU53 330 aa11.41□□□□□ -0.58
CTSB-227ENST00000533110 ZBTB21Q9ULJ3 1066 aa11.41□□□□□ -0.58
CTSB-227ENST00000533110 USP17L15C9J2P7 530 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 USP17L13C9JLJ4 530 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 USP17L11C9JVI0 530 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 USP17L18D6R9N7 530 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 USP17L22D6RA61 530 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 USP17L17D6RBQ6 530 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 USP17L19D6RCP7 530 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 USP17L20D6RJB6 530 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 PQBP1O60828 265 aaKnown RBP11.4□□□□□ -0.58
CTSB-227ENST00000533110 CIAO1O76071 339 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 GDF11O95390 407 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 IGFBP4P22692 258 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 USP17L24Q0WX57 530 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 CCDC174Q6PII3 467 aa11.4□□□□□ -0.58
CTSB-227ENST00000533110 RLFQ13129 1914 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 KIAA0355O15063 1070 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 ZBTB22O15209 634 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 CNMDO75829 334 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 ITGB8P26012 769 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 ADORA1P30542 326 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 IL15P40933 162 aaPredicted RBP11.39□□□□□ -0.59
CTSB-227ENST00000533110 LRRC41Q15345 812 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 ZYXQ15942 572 aaKnown RBP11.39□□□□□ -0.59
CTSB-227ENST00000533110 AAK1Q2M2I8 961 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 OLFML2BQ68BL8 750 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 WDR63Q8IWG1 891 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 TMEM39AQ9NV64 488 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 SLC5A4Q9NY91 659 aa11.39□□□□□ -0.59
CTSB-227ENST00000533110 SALL2Q9Y467 1007 aaPredicted RBP11.39□□□□□ -0.59
CTSB-227ENST00000533110 MVPQ14764 893 aaKnown RBP11.38□□□□□ -0.59
CTSB-227ENST00000533110 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
CTSB-227ENST00000533110 ATF7IPQ6VMQ6 1270 aa11.38□□□□□ -0.59
CTSB-227ENST00000533110 NECAB3Q96P71 396 aaPredicted RBP11.38□□□□□ -0.59
CTSB-227ENST00000533110 PBX4Q9BYU1 374 aa11.38□□□□□ -0.59
CTSB-227ENST00000533110 RAI14Q9P0K7 980 aa11.38□□□□□ -0.59
CTSB-227ENST00000533110 BAG3O95817 575 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 HLA-DOAP06340 250 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 RARBP10826 455 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 ADORA2AP29274 412 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 USP14P54578 494 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 JAG1P78504 1218 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 TMEM31Q5JXX7 168 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 RNF180Q86T96 592 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 FOXP4Q8IVH2 680 aaPredicted RBP11.37□□□□□ -0.59
CTSB-227ENST00000533110 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 NSUN4Q96CB9 384 aaKnown RBP11.37□□□□□ -0.59
CTSB-227ENST00000533110 C12orf42Q96LP6 360 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 USP44Q9H0E7 712 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 XPNPEP3Q9NQH7 507 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 CXXC1Q9P0U4 656 aaPredicted RBP11.37□□□□□ -0.59
CTSB-227ENST00000533110 MSRAQ9UJ68 235 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 PHF24Q9UPV7 400 aa11.37□□□□□ -0.59
CTSB-227ENST00000533110 PTPRCP08575 1304 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 DCDC2CA8MYV0 355 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 APBB1O00213 710 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 STRNO43815 780 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 PLCG2P16885 1265 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 VCAM1P19320 739 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 PBX2P40425 430 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 PPIGQ13427 754 aaKnown RBP eCLIP11.36□□□□□ -0.59
CTSB-227ENST00000533110 ADGRE1Q14246 886 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 RAB30Q15771 203 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 SHROOM1Q2M3G4 852 aaPredicted RBP11.36□□□□□ -0.59
CTSB-227ENST00000533110 LBX2Q6XYB7 198 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 CATSPERGQ6ZRH7 1159 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 MICALL1Q8N3F8 863 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 SH3RF3Q8TEJ3 882 aaPredicted RBP11.36□□□□□ -0.59
CTSB-227ENST00000533110 ZNF384Q8TF68 577 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.36□□□□□ -0.598e-8■■■■■ 37.7
CTSB-227ENST00000533110 LRFN3Q9BTN0 628 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 DNAJC18Q9H819 358 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 BTBD7Q9P203 1132 aa11.36□□□□□ -0.59
CTSB-227ENST00000533110 A0A1W2PQ45 241 aaPredicted RBP11.35□□□□□ -0.59
CTSB-227ENST00000533110 A0A1W2PQY0 241 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
CTSB-227ENST00000533110 GH2P01242 217 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 IGHA2P01877 340 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 UBTFL1P0CB47 393 aaPredicted RBP11.35□□□□□ -0.59
CTSB-227ENST00000533110 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
CTSB-227ENST00000533110 GORABQ5T7V8 394 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 MAPKAPK5Q8IW41 473 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 SLC28A3Q9HAS3 691 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 AATFQ9NY61 560 aaKnown RBP eCLIP11.35□□□□□ -0.59
CTSB-227ENST00000533110 LRP2BPQ9P2M1 347 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 AKAP2Q9Y2D5 859 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 BDP1A6H8Y1 2624 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 NCOR1O75376 2440 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 FLT1P17948 1338 aa11.35□□□□□ -0.59
CTSB-227ENST00000533110 A0A1B0GUL7 405 aa11.34□□□□□ -0.59
CTSB-227ENST00000533110 GRXCR1A8MXD5 290 aa11.34□□□□□ -0.59
CTSB-227ENST00000533110 TIMP1P01033 207 aa11.34□□□□□ -0.59
CTSB-227ENST00000533110 TIMM10P62072 90 aa11.34□□□□□ -0.59
CTSB-227ENST00000533110 RAB3GAP1Q15042 981 aa11.34□□□□□ -0.59
CTSB-227ENST00000533110 PRAMEF19Q5SWL8 479 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms