RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, human

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHORDC1-208	ENST00000533062	C16orf86	Q6ZW13	317 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	IFNL3	Q8IZI9	196 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	ANKRD13C	Q8N6S4	541 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	TRIM47	Q96LD4	638 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	FAM227B	Q96M60	508 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	FEZ1	Q99689	392 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062		A0A0D9SFI3	127 aa		13.74	□□□□□ -0.21
CHORDC1-208	ENST00000533062		A0A1W2PRG0	241 aa		13.74	□□□□□ -0.21
CHORDC1-208	ENST00000533062	FMNL1	O95466	1100 aa	Predicted RBP	13.74	□□□□□ -0.21
CHORDC1-208	ENST00000533062	GNAT2	P19087	354 aa		13.74	□□□□□ -0.21
CHORDC1-208	ENST00000533062	VPS53	Q5VIR6	699 aa		13.74	□□□□□ -0.21
CHORDC1-208	ENST00000533062	USP17L2	Q6R6M4	530 aa		13.74	□□□□□ -0.21
CHORDC1-208	ENST00000533062	P2RX7	Q99572	595 aa	Known RBP	13.74	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PTCH2	Q9Y6C5	1203 aa		13.74	□□□□□ -0.21
CHORDC1-208	ENST00000533062	FOXP2	O15409	715 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PRDM1	O75626	825 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	OSBP	P22059	807 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	SOX10	P56693	466 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	IRX3	P78415	501 aa	Predicted RBP	13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	ATP2B2	Q01814	1243 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	NMI	Q13287	307 aa	Predicted RBP	13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	SBK1	Q52WX2	424 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	GIMAP6	Q6P9H5	292 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	TMEM179	Q6ZVK1	233 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	SIAH1	Q8IUQ4	282 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	OSBPL3	Q9H4L5	887 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PNMA3	Q9UL41	463 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	LOC285556	D6RIA3	1793 aa		13.73	□□□□□ -0.21
CHORDC1-208	ENST00000533062	HOXA7	P31268	230 aa	Predicted RBP	13.72	□□□□□ -0.21
CHORDC1-208	ENST00000533062	ARHGEF6	Q15052	776 aa		13.72	□□□□□ -0.21
CHORDC1-208	ENST00000533062	KIAA1683	Q9H0B3	1180 aa		13.72	□□□□□ -0.21
CHORDC1-208	ENST00000533062	MKNK2	Q9HBH9	465 aa		13.72	□□□□□ -0.21
CHORDC1-208	ENST00000533062	MYC	P01106	439 aa	Predicted RBP	13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	VCAM1	P19320	739 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	RASA1	P20936	1047 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	USP14	P54578	494 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	HERVK_113	P62684	666 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	ICA1	Q05084	483 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	KIAA1755	Q5JYT7	1200 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	POTEE	Q6S8J3	1075 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	CCDC17	Q96LX7	622 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	NACAP1	Q9BZK3	213 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	NAPB	Q9H115	298 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	TXNRD2	Q9NNW7	524 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	INCENP	Q9NQS7	918 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	HELLS	Q9NRZ9	838 aa		13.71	□□□□□ -0.21
CHORDC1-208	ENST00000533062	SDS	P20132	328 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	FCGRT	P55899	365 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	PRKCZ	Q05513	592 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	CTDSPL2	Q05D32	466 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	MCMDC2	Q4G0Z9	681 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	SPICE1	Q8N0Z3	855 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	SH3TC2	Q8TF17	1288 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	C12orf42	Q96LP6	360 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	SRRD	Q9UH36	339 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	GABRQ	Q9UN88	632 aa		13.7	□□□□□ -0.22
CHORDC1-208	ENST00000533062	USP17L15	C9J2P7	530 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	USP17L13	C9JLJ4	530 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	USP17L11	C9JVI0	530 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	USP17L18	D6R9N7	530 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	USP17L22	D6RA61	530 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	USP17L17	D6RBQ6	530 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	USP17L19	D6RCP7	530 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	USP17L20	D6RJB6	530 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	TNPO2	O14787	897 aa	Known RBP	13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	EEF2	P13639	858 aa	Known RBP	13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	GCLC	P48506	637 aa	Predicted RBP	13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	PPARA	Q07869	468 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	USP17L24	Q0WX57	530 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	FAM110C	Q1W6H9	321 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062		Q3C1V9	767 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	SLC9C1	Q4G0N8	1177 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	CATSPERG	Q6ZRH7	1159 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	PAGR1	Q9BTK6	254 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	RBPJL	Q9UBG7	517 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	TAOK2	Q9UL54	1235 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	ROBO3	Q96MS0	1386 aa		13.69	□□□□□ -0.22
CHORDC1-208	ENST00000533062	MYPN	Q86TC9	1320 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	RAD21	O60216	631 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	GNRH1	P01148	92 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	GSPT1	P15170	499 aa	Known RBP	13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	HOXD10	P28358	340 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	FAM47A	Q5JRC9	791 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	CWC27	Q6UX04	472 aa	Known RBP	13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	RAET1E	Q8TD07	263 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	KANSL2	Q9H9L4	492 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	ARHGEF10L	Q9HCE6	1279 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	TMX2	Q9Y320	296 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	TACC3	Q9Y6A5	838 aa		13.68	□□□□□ -0.22
CHORDC1-208	ENST00000533062	MKI67	P46013	3256 aa	Known RBP	13.67	□□□□□ -0.22
CHORDC1-208	ENST00000533062	FGA	P02671	866 aa		13.67	□□□□□ -0.22
CHORDC1-208	ENST00000533062	HSPD1	P10809	573 aa	Known RBP	13.67	□□□□□ -0.22
CHORDC1-208	ENST00000533062	FLT3LG	P49771	235 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms