RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 RNF41Q9H4P4 317 aaPredicted RBP17.02■□□□□ 0.31
SSH3-210ENST00000532881 KCND1Q9NSA2 647 aa17.02■□□□□ 0.31
SSH3-210ENST00000532881 SRP68Q9UHB9 627 aaKnown RBP17.02■□□□□ 0.31
SSH3-210ENST00000532881 BCL9LQ86UU0 1499 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 ETF1P62495 437 aaKnown RBP17.01■□□□□ 0.31
SSH3-210ENST00000532881 DMTNQ08495 405 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 TROAPQ12815 778 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 DPYDQ12882 1025 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 SYCP1Q15431 976 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 PARP10Q53GL7 1025 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 TBC1D9BQ66K14 1250 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 SRBD1Q8N5C6 995 aaKnown RBP17.01■□□□□ 0.31
SSH3-210ENST00000532881 NPY5RQ15761 445 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 PHF20Q9BVI0 1012 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 MAPK8IP1Q9UQF2 711 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 BCORQ6W2J9 1755 aa17.01■□□□□ 0.31
SSH3-210ENST00000532881 EP400Q96L91 3159 aa17■□□□□ 0.31
SSH3-210ENST00000532881 CCDC196A0A1B0GTZ2 297 aa17■□□□□ 0.31
SSH3-210ENST00000532881 TRIM75PA6NK02 468 aa17■□□□□ 0.31
SSH3-210ENST00000532881 CBFA2T2O43439 604 aa17■□□□□ 0.31
SSH3-210ENST00000532881 ZNF18P17022 549 aa17■□□□□ 0.31
SSH3-210ENST00000532881 MECOMQ03112 1051 aa17■□□□□ 0.31
SSH3-210ENST00000532881 RASGRP4Q8TDF6 673 aa17■□□□□ 0.31
SSH3-210ENST00000532881 ARAP2Q8WZ64 1704 aa17■□□□□ 0.31
SSH3-210ENST00000532881 AK7Q96M32 723 aa17■□□□□ 0.31
SSH3-210ENST00000532881 BAG1Q99933 345 aaPredicted RBP17■□□□□ 0.31
SSH3-210ENST00000532881 L2HGDHQ9H9P8 463 aa17■□□□□ 0.31
SSH3-210ENST00000532881 OGFRQ9NZT2 677 aa17■□□□□ 0.31
SSH3-210ENST00000532881 PPP2R2CQ9Y2T4 447 aa17■□□□□ 0.31
SSH3-210ENST00000532881 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17■□□□□ 0.31
SSH3-210ENST00000532881 KRT2P35908 639 aa17■□□□□ 0.31
SSH3-210ENST00000532881 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
SSH3-210ENST00000532881 ZNF397Q8NF99 534 aaPredicted RBP17■□□□□ 0.31
SSH3-210ENST00000532881 PAGE5Q96GU1 130 aa17■□□□□ 0.31
SSH3-210ENST00000532881 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
SSH3-210ENST00000532881 CARD6Q9BX69 1037 aa17■□□□□ 0.31
SSH3-210ENST00000532881 SPATA31A1Q5TZJ5 1347 aa17■□□□□ 0.31
SSH3-210ENST00000532881 SOWAHDA6NJG2 315 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 MCM7P33993 719 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 PTGDRQ13258 359 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 ARHGAP29Q52LW3 1261 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 RASGRP2Q7LDG7 609 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 CATIPQ7Z7H3 387 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 AMIGO3Q86WK7 504 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 TMTC2Q8N394 836 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 RNF26Q9BY78 433 aaPredicted RBP16.99■□□□□ 0.31
SSH3-210ENST00000532881 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 CAVIN4Q5BKX8 364 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 GPR101Q96P66 508 aaPredicted RBP16.99■□□□□ 0.31
SSH3-210ENST00000532881 MYH13Q9UKX3 1938 aa16.99■□□□□ 0.31
SSH3-210ENST00000532881 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 TBX2Q13207 712 aaPredicted RBP16.98■□□□□ 0.31
SSH3-210ENST00000532881 IL17AQ16552 155 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 NT5DC1Q5TFE4 455 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 GPKOWQ92917 476 aaPredicted RBP eCLIP16.98■□□□□ 0.31
SSH3-210ENST00000532881 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
SSH3-210ENST00000532881 MYH6P13533 1939 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 NID2Q14112 1375 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 NRDCO43847 1150 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 TFRCP02786 760 aaKnown RBP16.98■□□□□ 0.31
SSH3-210ENST00000532881 GNG11P61952 73 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 SPECC1LQ69YQ0 1117 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 DYNLL2Q96FJ2 89 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 FEZ1Q99689 392 aa16.98■□□□□ 0.31
SSH3-210ENST00000532881 PHLPP1O60346 1717 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 ABL1P00519 1130 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 CCT6AP40227 531 aaKnown RBP16.97■□□□□ 0.31
SSH3-210ENST00000532881 IQCA1Q86XH1 822 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 MLKLQ8NB16 471 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 ENOX1Q8TC92 643 aaKnown RBP16.97■□□□□ 0.31
SSH3-210ENST00000532881 PLIN2Q99541 437 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 ZSWIM4Q9H7M6 989 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 MRPL44Q9H9J2 332 aaKnown RBP16.97■□□□□ 0.31
SSH3-210ENST00000532881 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 SEC31AO94979 1220 aaKnown RBP16.97■□□□□ 0.31
SSH3-210ENST00000532881 CLCN6P51797 869 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 EEF2KMTQ96G04 330 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 MTRQ99707 1265 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 CPVLQ9H3G5 476 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 DCP1AQ9NPI6 582 aaPredicted RBP16.97■□□□□ 0.31
SSH3-210ENST00000532881 LZTFL1Q9NQ48 299 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 GNL3LQ9NVN8 582 aaKnown RBP16.97■□□□□ 0.31
SSH3-210ENST00000532881 BSDC1Q9NW68 430 aaPredicted RBP16.97■□□□□ 0.31
SSH3-210ENST00000532881 HOOK1Q9UJC3 728 aaKnown RBP16.97■□□□□ 0.31
SSH3-210ENST00000532881 ANAPC4Q9UJX5 808 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
SSH3-210ENST00000532881 PRPF3O43395 683 aaKnown RBP16.96■□□□□ 0.31
SSH3-210ENST00000532881 RBL2Q08999 1139 aa16.96■□□□□ 0.31
SSH3-210ENST00000532881 NR1I3Q14994 352 aa16.96■□□□□ 0.31
SSH3-210ENST00000532881 APTXQ7Z2E3 356 aaKnown RBP16.96■□□□□ 0.31
SSH3-210ENST00000532881 STAG2Q8N3U4 1231 aa16.96■□□□□ 0.31
SSH3-210ENST00000532881 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.31
SSH3-210ENST00000532881 PLCD1P51178 756 aa16.96■□□□□ 0.31
SSH3-210ENST00000532881 GRIK5Q16478 980 aa16.96■□□□□ 0.31
SSH3-210ENST00000532881 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.31
SSH3-210ENST00000532881 TTC38Q5R3I4 469 aa16.96■□□□□ 0.31
SSH3-210ENST00000532881 ZNF579Q8NAF0 562 aaKnown RBP16.96■□□□□ 0.31
SSH3-210ENST00000532881 CTNND2Q9UQB3 1225 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms