RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 BLZF1Q9H2G9 400 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 KCNH3Q9ULD8 1083 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 GUCA1BQ9UMX6 200 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 IGSF1Q8N6C5 1336 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 SEL1L2Q5TEA6 688 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 KRT40Q6A162 431 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 ZSCAN10Q96SZ4 725 aaPredicted RBP16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 MCTP2Q6DN12 878 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 CCDC63Q8NA47 563 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 NOC4LQ9BVI4 516 aaKnown RBP16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 LRWD1Q9UFC0 647 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 ERBB4Q15303 1308 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 TUBBP07437 444 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 TRIM14Q14142 442 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 PODXL2Q9NZ53 605 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 SSH3Q8TE77 659 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 CNKSR1Q969H4 720 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 DSCC1Q9BVC3 393 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 KRT9P35527 623 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 INF2Q27J81 1249 aa16.49■□□□□ 0.23
PCDHA9-202ENST00000532602 LPXNO60711 386 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 PABPC4Q13310 644 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 CERKLQ49MI3 558 aaPredicted RBP16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 LIN9Q5TKA1 542 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 DNM3Q9UQ16 869 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 SPATA31E1Q6ZUB1 1445 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 SMCO2A6NFE2 343 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 SLU7O95391 586 aaKnown RBP16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 ME3Q16798 604 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 DCPSQ96C86 337 aaKnown RBP16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 HAUS7Q99871 368 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 ALAS1P13196 640 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 LEO1Q8WVC0 666 aaPredicted RBP16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 RNF34Q969K3 372 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 TNFAIP3P21580 790 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 DYNLL1P63167 89 aaKnown RBP16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
PCDHA9-202ENST00000532602 TESPA1A2RU30 521 aaPredicted RBP16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 PPP1R7Q15435 360 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 NLRX1Q86UT6 975 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 NELFCDQ8IXH7 590 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 GIMAP7Q8NHV1 300 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 GABPB2Q8TAK5 448 aaPredicted RBP16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 PRDM10Q9NQV6 1147 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 ERBB3P21860 1342 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 M0R2C6 588 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 MYCT1Q8N699 235 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 PAIP2Q9BPZ3 127 aaKnown RBP16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 AATKQ6ZMQ8 1374 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 CUTAO60888 179 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 CEP128Q6ZU80 1094 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 TPH2Q8IWU9 490 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 HSPD1P10809 573 aaKnown RBP16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 GNPTABQ3T906 1256 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 VAV2P52735 878 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
PCDHA9-202ENST00000532602 GADD45BO75293 160 aaPredicted RBP16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 HSPA4P34932 840 aa16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 MXRA7P84157 204 aa16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 TET3O43151 1660 aa16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 KIF22Q14807 665 aa16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 CDC42BPGQ6DT37 1551 aa16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 CFAP58Q5T655 872 aa16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 SPICE1Q8N0Z3 855 aa16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 SMC6Q96SB8 1091 aa16.46■□□□□ 0.23
PCDHA9-202ENST00000532602 CABP7Q86V35 215 aa16.46■□□□□ 0.22
PCDHA9-202ENST00000532602 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 SPOPO43791 374 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 GCNT3O95395 438 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 V9GYY5 206 aaPredicted RBP16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 XDHP47989 1333 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 RAD17O75943 681 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 PDE8BO95263 885 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 ALDH3A1P30838 453 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 ARFGAP2Q8N6H7 521 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 NOLC1Q14978 699 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 FAM204AQ9H8W3 233 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 FGAP02671 866 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 NCAPG2Q86XI2 1143 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 AGTPBP1Q9UPW5 1226 aa16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 AKR1B15C9JRZ8 316 aaPredicted RBP16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 HERC4Q5GLZ8 1057 aaPredicted RBP16.45■□□□□ 0.22
PCDHA9-202ENST00000532602 CSGALNACT2Q8N6G5 542 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 IWS1Q96ST2 819 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 PALD1Q9ULE6 856 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 CNGA1P29973 690 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 MKRN3Q13064 507 aaKnown RBP16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 ZNF569Q5MCW4 686 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 PI16Q6UXB8 463 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms