RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	DDX54	Q8TDD1	881 aa	Known RBP	8.07	□□□□□ -1.12
PUM1-222	ENST00000531867	WNT8B	Q93098	351 aa		8.07	□□□□□ -1.12
PUM1-222	ENST00000531867	POP1	Q99575	1024 aa	Known RBP	8.07	□□□□□ -1.12
PUM1-222	ENST00000531867	OSMR	Q99650	979 aa		8.07	□□□□□ -1.12
PUM1-222	ENST00000531867	ZFYVE28	Q9HCC9	887 aa		8.07	□□□□□ -1.12
PUM1-222	ENST00000531867	FAM208A	Q9UK61	1670 aa	Known RBP	8.07	□□□□□ -1.12
PUM1-222	ENST00000531867	SOWAHD	A6NJG2	315 aa		8.06	□□□□□ -1.12
PUM1-222	ENST00000531867		H3BRJ5	948 aa		8.06	□□□□□ -1.12
PUM1-222	ENST00000531867	NFKBIE	O00221	500 aa		8.06	□□□□□ -1.12
PUM1-222	ENST00000531867	ANKRD24	Q8TF21	1146 aa		8.06	□□□□□ -1.12
PUM1-222	ENST00000531867	FAM129B	Q96TA1	746 aa		8.06	□□□□□ -1.12
PUM1-222	ENST00000531867	BRCA1	P38398	1863 aa	Known RBP	8.06	□□□□□ -1.12
PUM1-222	ENST00000531867	MON2	Q7Z3U7	1717 aa		8.06	□□□□□ -1.12
PUM1-222	ENST00000531867	HSPA1A	P0DMV8	641 aa	Known RBP	8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	HSPA1B	P0DMV9	641 aa	Known RBP	8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	ACPP	P15309	386 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	EPHA1	P21709	976 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	AMIGO3	Q86WK7	504 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	TMEM130	Q8N3G9	435 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	WFDC12	Q8WWY7	111 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	SYTL4	Q96C24	671 aa	Predicted RBP	8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	DMRTB1	Q96MA1	342 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	ZKSCAN3	Q9BRR0	538 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	AKTIP	Q9H8T0	292 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	C4B	P0C0L5	1744 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	USP47	Q96K76	1375 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	PXDNL	A1KZ92	1463 aa		8.05	□□□□□ -1.12
PUM1-222	ENST00000531867	ARFGEF1	Q9Y6D6	1849 aa		8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	FSCN2	O14926	492 aa		8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	CD68	P34810	354 aa	Predicted RBP	8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	TGFB2	P61812	414 aa		8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	KCNA1	Q09470	495 aa		8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	RSPO4	Q2I0M5	234 aa	Predicted RBP	8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	BSND	Q8WZ55	320 aa		8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	RBCK1	Q9BYM8	510 aa		8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	BHLHE41	Q9C0J9	482 aa	Predicted RBP	8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	OSGEP	Q9NPF4	335 aa		8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	SEC31B	Q9NQW1	1179 aa		8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	SH2B1	Q9NRF2	756 aa	Predicted RBP	8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	SOX13	Q9UN79	622 aa		8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	N4BP2	Q86UW6	1770 aa	Predicted RBP	8.04	□□□□□ -1.12
PUM1-222	ENST00000531867	PKD1L3	Q7Z443	1732 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	PCNT	O95613	3336 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	TNRC6C	Q9HCJ0	1690 aa	Known RBP	8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	PLEKHG2	Q9H7P9	1386 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	H2AFB1	P0C5Y9	115 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	H2AFB2	P0C5Z0	115 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	NOS3	P29474	1203 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	ARL4D	P49703	201 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	NKAPL	Q5M9Q1	402 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	TXNDC11	Q6PKC3	985 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	GALNT12	Q8IXK2	581 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	ZCRB1	Q8TBF4	217 aa	Known RBP	8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	TMC1	Q8TDI8	760 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	IP6K1	Q92551	441 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	NXPE3	Q969Y0	559 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	MAP2	P11137	1827 aa	Known RBP	8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	NSD3	Q9BZ95	1437 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	EVC2	Q86UK5	1308 aa		8.03	□□□□□ -1.12
PUM1-222	ENST00000531867	KTN1	Q86UP2	1357 aa	Known RBP	8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	SBNO2	Q9Y2G9	1366 aa		8.02	□□□□□ -1.13
PUM1-222	ENST00000531867		F8W735	103 aa	Predicted RBP	8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	EIF4EBP3	O60516	100 aa	Predicted RBP	8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	CPNE3	O75131	537 aa	Known RBP	8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	IREB2	P48200	963 aa	Known RBP	8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	ADAMTSL4	Q6UY14	1074 aa		8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	C16orf71	Q8IYS4	520 aa	Predicted RBP	8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	GALNT11	Q8NCW6	608 aa		8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	SMC1B	Q8NDV3	1235 aa		8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	SSBP4	Q9BWG4	385 aa	Predicted RBP	8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	BIN2	Q9UBW5	565 aa	Predicted RBP	8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	SBF1	O95248	1867 aa		8.02	□□□□□ -1.13
PUM1-222	ENST00000531867	CD163L1	Q9NR16	1453 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	DYRK3	O43781	588 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	TRPA1	O75762	1119 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	CDC25B	P30305	580 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	PEAR1	Q5VY43	1037 aa	Predicted RBP	8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	C9orf131	Q5VYM1	1079 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	TP53INP1	Q96A56	240 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	ZNF428	Q96B54	188 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	ALKBH8	Q96BT7	664 aa	Known RBP	8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	PUS7	Q96PZ0	661 aa	Known RBP	8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	HHIP	Q96QV1	700 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	DNAJC25	Q9H1X3	360 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	MEGF6	O75095	1541 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	KCP	Q6ZWJ8	1503 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	RGPD2	P0DJD1	1756 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	CGNL1	Q0VF96	1302 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	KDM2B	Q8NHM5	1336 aa		8.01	□□□□□ -1.13
PUM1-222	ENST00000531867	PALLD	Q8WX93	1383 aa		8	□□□□□ -1.13
PUM1-222	ENST00000531867	KCNA3	P22001	575 aa		8	□□□□□ -1.13
PUM1-222	ENST00000531867	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	8	□□□□□ -1.13
PUM1-222	ENST00000531867	FOXD4L3	Q6VB84	417 aa	Predicted RBP	8	□□□□□ -1.13
PUM1-222	ENST00000531867		Q6ZS46	218 aa		8	□□□□□ -1.13
PUM1-222	ENST00000531867	ARHGAP27	Q6ZUM4	889 aa		8	□□□□□ -1.13
PUM1-222	ENST00000531867	NME9	Q86XW9	330 aa		8	□□□□□ -1.13
PUM1-222	ENST00000531867	ASAP3	Q8TDY4	903 aa		8	□□□□□ -1.13
PUM1-222	ENST00000531867	SEMA6B	Q9H3T3	888 aa		8	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms