RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 GAL3ST3Q96A11 431 aa3.29□□□□□ -1.88
RC3H1-206ENST00000531594 SHISA4Q96DD7 197 aa3.29□□□□□ -1.88
RC3H1-206ENST00000531594 CCDC97Q96F63 343 aaPredicted RBP3.29□□□□□ -1.88
RC3H1-206ENST00000531594 CCDC120Q96HB5 630 aa3.29□□□□□ -1.88
RC3H1-206ENST00000531594 ZNF552Q9H707 407 aaPredicted RBP3.29□□□□□ -1.88
RC3H1-206ENST00000531594 EGFL7Q9UHF1 273 aa3.29□□□□□ -1.88
RC3H1-206ENST00000531594 NOTOA8MTQ0 251 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 TPP2P29144 1249 aaPredicted RBP3.28□□□□□ -1.88
RC3H1-206ENST00000531594 EGR3Q06889 387 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 TMEM132EQ6IEE7 984 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 TMPRSS7Q7RTY8 843 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 SIRT2Q8IXJ6 389 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 KCT2Q8NC54 265 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 PDZD8Q8NEN9 1154 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 TMC1Q8TDI8 760 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 DACT3Q96B18 629 aaPredicted RBP3.28□□□□□ -1.88
RC3H1-206ENST00000531594 WNT10AQ9GZT5 417 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 SLC6A17Q9H1V8 727 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 MBD1Q9UIS9 605 aaPredicted RBP3.28□□□□□ -1.88
RC3H1-206ENST00000531594 MTMR7Q9Y216 660 aa3.28□□□□□ -1.88
RC3H1-206ENST00000531594 YBX2Q9Y2T7 364 aaKnown RBP3.28□□□□□ -1.88
RC3H1-206ENST00000531594 SLC22A31A6NKX4 558 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 PEX10O60683 326 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 CST3P01034 146 aaPredicted RBP3.27□□□□□ -1.89
RC3H1-206ENST00000531594 XRCC5P13010 732 aaKnown RBP3.27□□□□□ -1.89
RC3H1-206ENST00000531594 INSRRP14616 1297 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 SDHBP21912 280 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 GRK4P32298 578 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 PDE6BP35913 854 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 CAP2P40123 477 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 ETF1P62495 437 aaKnown RBP3.27□□□□□ -1.89
RC3H1-206ENST00000531594 KRTAP1-1Q07627 177 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 ZNF385BQ569K4 471 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 WIPI1Q5MNZ9 446 aaPredicted RBP3.27□□□□□ -1.89
RC3H1-206ENST00000531594 PCNX4Q63HM2 1172 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 MFSD2AQ8NA29 543 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 SETDB2Q96T68 719 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 NLRP2Q9NX02 1062 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 DUSP13Q9UII6 198 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 GPR160Q9UJ42 338 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 PCDHA11Q9Y5I1 949 aa3.27□□□□□ -1.89
RC3H1-206ENST00000531594 LRRN2O75325 713 aa3.26□□□□□ -1.89
RC3H1-206ENST00000531594 AFF3P51826 1226 aaKnown RBP3.26□□□□□ -1.89
RC3H1-206ENST00000531594 HID1Q8IV36 788 aa3.26□□□□□ -1.89
RC3H1-206ENST00000531594 DNAJB8Q8NHS0 232 aa3.26□□□□□ -1.89
RC3H1-206ENST00000531594 ALKBH8Q96BT7 664 aaKnown RBP3.26□□□□□ -1.89
RC3H1-206ENST00000531594 OSBPL7Q9BZF2 842 aa3.26□□□□□ -1.89
RC3H1-206ENST00000531594 TJP2Q9UDY2 1190 aa3.26□□□□□ -1.89
RC3H1-206ENST00000531594 SERPINA10Q9UK55 444 aa3.26□□□□□ -1.89
RC3H1-206ENST00000531594 PNMA6FA0A0J9YX94 578 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 SHISA3A0PJX4 238 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 RFXAPO00287 272 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 PRICKLE3O43900 615 aaPredicted RBP3.25□□□□□ -1.89
RC3H1-206ENST00000531594 SASH1O94885 1247 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 KIR3DL1P43629 444 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 EFEMP1Q12805 493 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 PUM1Q14671 1186 aaKnown RBP eCLIP3.25□□□□□ -1.89
RC3H1-206ENST00000531594 ZXDCQ2QGD7 858 aaPredicted RBP3.25□□□□□ -1.89
RC3H1-206ENST00000531594 ADGRF1Q5T601 910 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 TMC7Q7Z402 723 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 TMEFF1Q8IYR6 380 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 LILRA2Q8N149 483 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 BDH2Q9BUT1 245 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 CNTD2Q9H8S5 307 aa3.25□□□□□ -1.89
RC3H1-206ENST00000531594 CWC22Q9HCG8 908 aaKnown RBP3.25□□□□□ -1.89
RC3H1-206ENST00000531594 FITM1A5D6W6 292 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 SRSF3P84103 164 aaKnown RBP3.24□□□□□ -1.89
RC3H1-206ENST00000531594 SEPT6Q14141 434 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 KIR3DS1Q14943 382 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 NR0B2Q15466 257 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 ZNF746Q6NUN9 644 aaPredicted RBP3.24□□□□□ -1.89
RC3H1-206ENST00000531594 HDXQ7Z353 690 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 TSPYL5Q86VY4 417 aaPredicted RBP3.24□□□□□ -1.89
RC3H1-206ENST00000531594 DTWD2Q8NBA8 298 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 TP53I13Q8NBR0 393 aaPredicted RBP3.24□□□□□ -1.89
RC3H1-206ENST00000531594 PIWIL2Q8TC59 973 aaKnown RBP3.24□□□□□ -1.89
RC3H1-206ENST00000531594 PPP1R13LQ8WUF5 828 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 SIGLEC10Q96LC7 697 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 CITED4Q96RK1 184 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 G6PC3Q9BUM1 346 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 PPP4R2Q9NY27 417 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 IRAK3Q9Y616 596 aa3.24□□□□□ -1.89
RC3H1-206ENST00000531594 GFRA2O00451 464 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 IRS4O14654 1257 aaPredicted RBP3.23□□□□□ -1.89
RC3H1-206ENST00000531594 AKAP8O43823 692 aaKnown RBP3.23□□□□□ -1.89
RC3H1-206ENST00000531594 USP2O75604 605 aaPredicted RBP3.23□□□□□ -1.89
RC3H1-206ENST00000531594 CYP7A1P22680 504 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 LTKP29376 864 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 VIPR1P32241 457 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 CDR1P51861 262 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 TEKQ02763 1124 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 RTP5Q14D33 572 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 LRRC14Q15048 493 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 TMEM151BQ8IW70 566 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 CCDC82Q8N4S0 544 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 OXR1Q8N573 874 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 DMRTB1Q96MA1 342 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 RBCK1Q9BYM8 510 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 CYP8B1Q9UNU6 501 aa3.23□□□□□ -1.89
RC3H1-206ENST00000531594 PCDHB5Q9Y5E4 795 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms