RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 NAV1Q8NEY1 1877 aa17.27■□□□□ 0.36
FOXR1-202ENST00000531539 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
FOXR1-202ENST00000531539 A0A0D9SFI3 127 aa17.27■□□□□ 0.36
FOXR1-202ENST00000531539 TMEM179Q6ZVK1 233 aa17.27■□□□□ 0.36
FOXR1-202ENST00000531539 OTOP1Q7RTM1 612 aa17.27■□□□□ 0.36
FOXR1-202ENST00000531539 ARHGAP39Q9C0H5 1083 aa17.27■□□□□ 0.36
FOXR1-202ENST00000531539 ASCC2Q9H1I8 757 aaPredicted RBP17.27■□□□□ 0.36
FOXR1-202ENST00000531539 PNMA3Q9UL41 463 aa17.27■□□□□ 0.36
FOXR1-202ENST00000531539 USP14P54578 494 aa17.26■□□□□ 0.35
FOXR1-202ENST00000531539 LACTBP83111 547 aaPredicted RBP17.26■□□□□ 0.35
FOXR1-202ENST00000531539 CAP1Q01518 475 aa17.26■□□□□ 0.35
FOXR1-202ENST00000531539 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
FOXR1-202ENST00000531539 ZNF444Q8N0Y2 327 aaPredicted RBP17.26■□□□□ 0.35
FOXR1-202ENST00000531539 P2RX7Q99572 595 aaKnown RBP17.26■□□□□ 0.35
FOXR1-202ENST00000531539 DIAPH3Q9NSV4 1193 aa17.26■□□□□ 0.35
FOXR1-202ENST00000531539 ATAD5Q96QE3 1844 aa17.26■□□□□ 0.35
FOXR1-202ENST00000531539 ADGRA2Q96PE1 1338 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 A0A1W2PRG0 241 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 PRDM1O75626 825 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 FMNL1O95466 1100 aaPredicted RBP17.25■□□□□ 0.35
FOXR1-202ENST00000531539 BCRP11274 1271 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 HOXA7P31268 230 aaPredicted RBP17.25■□□□□ 0.35
FOXR1-202ENST00000531539 PSMC4P43686 418 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 IRX3P78415 501 aaPredicted RBP17.25■□□□□ 0.35
FOXR1-202ENST00000531539 ATP2B2Q01814 1243 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 TTC22Q5TAA0 569 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 FBXO46Q6PJ61 603 aaPredicted RBP17.25■□□□□ 0.35
FOXR1-202ENST00000531539 CWC27Q6UX04 472 aaKnown RBP17.25■□□□□ 0.35
FOXR1-202ENST00000531539 SIAH1Q8IUQ4 282 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 ANKRD13CQ8N6S4 541 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 KIAA1683Q9H0B3 1180 aa17.25■□□□□ 0.35
FOXR1-202ENST00000531539 HIP1O00291 1037 aa17.24■□□□□ 0.35
FOXR1-202ENST00000531539 FOXP2O15409 715 aa17.24■□□□□ 0.35
FOXR1-202ENST00000531539 SLC3A2P08195 630 aaKnown RBP17.24■□□□□ 0.35
FOXR1-202ENST00000531539 RASA1P20936 1047 aa17.24■□□□□ 0.35
FOXR1-202ENST00000531539 CTDSPL2Q05D32 466 aa17.24■□□□□ 0.35
FOXR1-202ENST00000531539 PPARAQ07869 468 aa17.24■□□□□ 0.35
FOXR1-202ENST00000531539 ZNF589Q86UQ0 364 aaPredicted RBP17.24■□□□□ 0.35
FOXR1-202ENST00000531539 CLEC10AQ8IUN9 316 aa17.24■□□□□ 0.35
FOXR1-202ENST00000531539 KANSL2Q9H9L4 492 aa17.24■□□□□ 0.35
FOXR1-202ENST00000531539 ZNF287Q9HBT7 754 aa17.24■□□□□ 0.35
FOXR1-202ENST00000531539 PTPN22Q9Y2R2 807 aa17.24■□□□□ 0.35
FOXR1-202ENST00000531539 USP17L15C9J2P7 530 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 USP17L18D6R9N7 530 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 USP17L22D6RA61 530 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 USP17L17D6RBQ6 530 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 USP17L19D6RCP7 530 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 USP17L20D6RJB6 530 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 FGAP02671 866 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 NEFLP07196 543 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
FOXR1-202ENST00000531539 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
FOXR1-202ENST00000531539 ICA1Q05084 483 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 PDE4BQ07343 736 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 USP17L24Q0WX57 530 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 ALX1Q15699 326 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 INCENPQ9NQS7 918 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 HPS5Q9UPZ3 1129 aa17.23■□□□□ 0.35
FOXR1-202ENST00000531539 DDX60LQ5H9U9 1706 aaKnown RBP17.22■□□□□ 0.35
FOXR1-202ENST00000531539 EEF2P13639 858 aaKnown RBP17.22■□□□□ 0.35
FOXR1-202ENST00000531539 GSPT1P15170 499 aaKnown RBP17.22■□□□□ 0.35
FOXR1-202ENST00000531539 CTGFP29279 349 aa17.22■□□□□ 0.35
FOXR1-202ENST00000531539 GCLCP48506 637 aaPredicted RBP17.22■□□□□ 0.35
FOXR1-202ENST00000531539 CATSPERGQ6ZRH7 1159 aa17.22■□□□□ 0.35
FOXR1-202ENST00000531539 CENPQQ7L2Z9 268 aaPredicted RBP17.22■□□□□ 0.35
FOXR1-202ENST00000531539 TRIM47Q96LD4 638 aa17.22■□□□□ 0.35
FOXR1-202ENST00000531539 C12orf42Q96LP6 360 aa17.22■□□□□ 0.35
FOXR1-202ENST00000531539 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.35
FOXR1-202ENST00000531539 RAD21O60216 631 aa17.21■□□□□ 0.35
FOXR1-202ENST00000531539 HOXD10P28358 340 aa17.21■□□□□ 0.35
FOXR1-202ENST00000531539 FAM47AQ5JRC9 791 aa17.21■□□□□ 0.35
FOXR1-202ENST00000531539 CCDC136Q96JN2 1154 aa17.21■□□□□ 0.35
FOXR1-202ENST00000531539 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.21■□□□□ 0.35
FOXR1-202ENST00000531539 RPAP3Q9H6T3 665 aaPredicted RBP17.21■□□□□ 0.35
FOXR1-202ENST00000531539 TMX2Q9Y320 296 aa17.21■□□□□ 0.35
FOXR1-202ENST00000531539 PTPRFP10586 1907 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 PEX10O60683 326 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 GNRH1P01148 92 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
FOXR1-202ENST00000531539 VCAM1P19320 739 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 FCGRTP55899 365 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 HERVK_113P62684 666 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 TFAP4Q01664 338 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 SPICE1Q8N0Z3 855 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 CLIP2Q9UDT6 1046 aa17.2■□□□□ 0.34
FOXR1-202ENST00000531539 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
FOXR1-202ENST00000531539 TSPY3P0CV98 308 aa17.19■□□□□ 0.34
FOXR1-202ENST00000531539 TSPY8P0CW00 308 aa17.19■□□□□ 0.34
FOXR1-202ENST00000531539 SKAP1Q86WV1 359 aa17.19■□□□□ 0.34
FOXR1-202ENST00000531539 PAGR1Q9BTK6 254 aa17.19■□□□□ 0.34
FOXR1-202ENST00000531539 TOMM22Q9NS69 142 aa17.19■□□□□ 0.34
FOXR1-202ENST00000531539 RBPJLQ9UBG7 517 aa17.19■□□□□ 0.34
FOXR1-202ENST00000531539 PTCH2Q9Y6C5 1203 aa17.19■□□□□ 0.34
FOXR1-202ENST00000531539 HAND2P61296 217 aa17.18■□□□□ 0.34
FOXR1-202ENST00000531539 FAM110CQ1W6H9 321 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms