RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PGRP06401 933 aa8.91□□□□□ -0.98
PTPRK-220ENST00000531466 P4HBP07237 508 aaKnown RBP8.91□□□□□ -0.98
PTPRK-220ENST00000531466 MED14OSP0DP75 135 aa8.91□□□□□ -0.98
PTPRK-220ENST00000531466 CCDC85BQ15834 202 aaPredicted RBP8.91□□□□□ -0.98
PTPRK-220ENST00000531466 Q96M66 194 aa8.91□□□□□ -0.98
PTPRK-220ENST00000531466 SMG5Q9UPR3 1016 aaKnown RBP8.91□□□□□ -0.98
PTPRK-220ENST00000531466 NCANO14594 1321 aa8.9□□□□□ -0.98
PTPRK-220ENST00000531466 ETV3P41162 512 aa8.9□□□□□ -0.98
PTPRK-220ENST00000531466 AMIGO3Q86WK7 504 aa8.9□□□□□ -0.98
PTPRK-220ENST00000531466 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
PTPRK-220ENST00000531466 TMEM87BQ96K49 555 aa8.9□□□□□ -0.98
PTPRK-220ENST00000531466 RNF32Q9H0A6 362 aa8.9□□□□□ -0.98
PTPRK-220ENST00000531466 B8ZZF3 427 aa8.89□□□□□ -0.99
PTPRK-220ENST00000531466 PRRG2O14669 202 aa8.89□□□□□ -0.99
PTPRK-220ENST00000531466 LDHBP07195 334 aaKnown RBP8.89□□□□□ -0.99
PTPRK-220ENST00000531466 INHBBP09529 407 aa8.89□□□□□ -0.99
PTPRK-220ENST00000531466 GLDCP23378 1020 aa8.89□□□□□ -0.99
PTPRK-220ENST00000531466 TPP2P29144 1249 aaPredicted RBP8.89□□□□□ -0.99
PTPRK-220ENST00000531466 MAP3K11Q16584 847 aa8.89□□□□□ -0.99
PTPRK-220ENST00000531466 KCNN1Q92952 543 aa8.89□□□□□ -0.99
PTPRK-220ENST00000531466 SLC26A8Q96RN1 970 aa8.89□□□□□ -0.99
PTPRK-220ENST00000531466 DUSP15Q9H1R2 295 aaPredicted RBP8.89□□□□□ -0.99
PTPRK-220ENST00000531466 LINC00310P59036 64 aa8.88□□□□□ -0.99
PTPRK-220ENST00000531466 RPS26P62854 115 aaKnown RBP8.88□□□□□ -0.99
PTPRK-220ENST00000531466 DNAJB8Q8NHS0 232 aa8.88□□□□□ -0.99
PTPRK-220ENST00000531466 C19orf44Q9H6X5 657 aa8.88□□□□□ -0.99
PTPRK-220ENST00000531466 TACC3Q9Y6A5 838 aa8.88□□□□□ -0.99
PTPRK-220ENST00000531466 SUPT5HO00267 1087 aaKnown RBP8.87□□□□□ -0.99
PTPRK-220ENST00000531466 NUAK1O60285 661 aa8.87□□□□□ -0.99
PTPRK-220ENST00000531466 EIF4BP23588 611 aaKnown RBP8.87□□□□□ -0.99
PTPRK-220ENST00000531466 GAB4Q2WGN9 574 aa8.87□□□□□ -0.99
PTPRK-220ENST00000531466 SLC6A19Q695T7 634 aa8.87□□□□□ -0.99
PTPRK-220ENST00000531466 EGR3Q06889 387 aa8.86□□□□□ -0.99
PTPRK-220ENST00000531466 AGMOQ6ZNB7 445 aa8.86□□□□□ -0.99
PTPRK-220ENST00000531466 TRIT1Q9H3H1 467 aaKnown RBP8.86□□□□□ -0.99
PTPRK-220ENST00000531466 DUSP13Q9UII6 198 aa8.86□□□□□ -0.99
PTPRK-220ENST00000531466 BUD31P41223 144 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-220ENST00000531466 LIG3P49916 1009 aa8.85□□□□□ -0.99
PTPRK-220ENST00000531466 FRMD6Q96NE9 622 aa8.85□□□□□ -0.99
PTPRK-220ENST00000531466 IRF2BPLQ9H1B7 796 aa8.85□□□□□ -0.99
PTPRK-220ENST00000531466 MIR1-1HGQ9H1L0 117 aa8.85□□□□□ -0.99
PTPRK-220ENST00000531466 SP110Q9HB58 689 aa8.85□□□□□ -0.99
PTPRK-220ENST00000531466 GPATCH2Q9NW75 528 aa8.85□□□□□ -0.99
PTPRK-220ENST00000531466 RAPGEFL1Q9UHV5 662 aa8.85□□□□□ -0.99
PTPRK-220ENST00000531466 IVNS1ABPQ9Y6Y0 642 aa8.85□□□□□ -0.99
PTPRK-220ENST00000531466 GNA15P30679 374 aa8.84□□□□□ -0.99
PTPRK-220ENST00000531466 PDE4BQ07343 736 aa8.84□□□□□ -0.99
PTPRK-220ENST00000531466 TIGD5Q53EQ6 642 aa8.84□□□□□ -0.99
PTPRK-220ENST00000531466 LCE5AQ5TCM9 118 aa8.84□□□□□ -0.99
PTPRK-220ENST00000531466 MCATQ8IVS2 390 aaKnown RBP8.84□□□□□ -0.99
PTPRK-220ENST00000531466 ACSF2Q96CM8 615 aaPredicted RBP8.84□□□□□ -0.99
PTPRK-220ENST00000531466 CEP131Q9UPN4 1083 aa8.84□□□□□ -0.99
PTPRK-220ENST00000531466 ZGLP1P0C6A0 271 aa8.83□□□□□ -1
PTPRK-220ENST00000531466 TFE3P19532 575 aaPredicted RBP8.83□□□□□ -1
PTPRK-220ENST00000531466 PDZD8Q8NEN9 1154 aa8.83□□□□□ -1
PTPRK-220ENST00000531466 PPP1R13LQ8WUF5 828 aa8.83□□□□□ -1
PTPRK-220ENST00000531466 LTKP29376 864 aa8.82□□□□□ -1
PTPRK-220ENST00000531466 CTSWP56202 376 aa8.82□□□□□ -1
PTPRK-220ENST00000531466 TSPYL5Q86VY4 417 aaPredicted RBP8.82□□□□□ -1
PTPRK-220ENST00000531466 DTWD2Q8NBA8 298 aa8.82□□□□□ -1
PTPRK-220ENST00000531466 JARID2Q92833 1246 aaPredicted RBP8.82□□□□□ -1
PTPRK-220ENST00000531466 KRTAP4-5Q9BYR2 181 aa8.82□□□□□ -1
PTPRK-220ENST00000531466 GPR62Q9BZJ7 368 aa8.82□□□□□ -1
PTPRK-220ENST00000531466 RNF19AQ9NV58 838 aa8.82□□□□□ -1
PTPRK-220ENST00000531466 PCDHA11Q9Y5I1 949 aa8.82□□□□□ -1
PTPRK-220ENST00000531466 CORINQ9Y5Q5 1042 aa8.82□□□□□ -1
PTPRK-220ENST00000531466 SRFP11831 508 aa8.81□□□□□ -1
PTPRK-220ENST00000531466 TSNAXIP1Q2TAA8 658 aa8.81□□□□□ -1
PTPRK-220ENST00000531466 ZNF605Q86T29 641 aa8.81□□□□□ -1
PTPRK-220ENST00000531466 MCOLN1Q9GZU1 580 aa8.81□□□□□ -1
PTPRK-220ENST00000531466 SLC6A17Q9H1V8 727 aa8.81□□□□□ -1
PTPRK-220ENST00000531466 ADAM30Q9UKF2 790 aa8.81□□□□□ -1
PTPRK-220ENST00000531466 LRRN2O75325 713 aa8.8□□□□□ -1
PTPRK-220ENST00000531466 RPL6Q02878 288 aaKnown RBP8.8□□□□□ -1
PTPRK-220ENST00000531466 LILRA2Q8N149 483 aa8.8□□□□□ -1
PTPRK-220ENST00000531466 OXR1Q8N573 874 aa8.8□□□□□ -1
PTPRK-220ENST00000531466 MYOCOSA0A1B0GUC4 107 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 UPK3BL1B0FP48 263 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 UPK3BL2E5RIL1 263 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 HOXA5P20719 270 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 DLG4P78352 724 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 MEI1Q5TIA1 1274 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 IRF2BP1Q8IU81 584 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 CYB5D2Q8WUJ1 264 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 KCNH3Q9ULD8 1083 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 TLR6Q9Y2C9 796 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 AK5Q9Y6K8 562 aa8.79□□□□□ -1
PTPRK-220ENST00000531466 FITM1A5D6W6 292 aa8.78□□□□□ -1
PTPRK-220ENST00000531466 PRPF40AO75400 957 aaKnown RBP8.78□□□□□ -1
PTPRK-220ENST00000531466 FAM13CQ8NE31 585 aa8.78□□□□□ -1
PTPRK-220ENST00000531466 PLCG1P19174 1290 aa8.77□□□□□ -1.01
PTPRK-220ENST00000531466 DHX38Q92620 1227 aaKnown RBP8.77□□□□□ -1.01
PTPRK-220ENST00000531466 INTS4Q96HW7 963 aaKnown RBP8.77□□□□□ -1.01
PTPRK-220ENST00000531466 C20orf173Q96LM9 149 aa8.77□□□□□ -1.01
PTPRK-220ENST00000531466 DUSP9Q99956 384 aaKnown RBP8.77□□□□□ -1.01
PTPRK-220ENST00000531466 YBX2Q9Y2T7 364 aaKnown RBP8.77□□□□□ -1.01
PTPRK-220ENST00000531466 PDE6BP35913 854 aa8.76□□□□□ -1.01
PTPRK-220ENST00000531466 GALK1P51570 392 aa8.76□□□□□ -1.01
PTPRK-220ENST00000531466 BAHD1Q8TBE0 780 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-220ENST00000531466 SYTL4Q96C24 671 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms