RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 USP17L19D6RCP7 530 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 USP17L20D6RJB6 530 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 MPHOSPH10O00566 681 aaKnown RBP19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 USP17L24Q0WX57 530 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 CRNKL1Q9BZJ0 848 aaKnown RBP19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 STAP2Q9UGK3 403 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 GLRX3O76003 335 aaKnown RBP19.19■□□□□ 0.66
CHMP4A-204ENST00000530996 XRCC5P13010 732 aaKnown RBP19.19■□□□□ 0.66
CHMP4A-204ENST00000530996 VCAM1P19320 739 aa19.19■□□□□ 0.66
CHMP4A-204ENST00000530996 TATDN1Q6P1N9 297 aa19.19■□□□□ 0.66
CHMP4A-204ENST00000530996 TMED8Q6PL24 325 aaPredicted RBP19.19■□□□□ 0.66
CHMP4A-204ENST00000530996 MIER1Q8N108 512 aa19.19■□□□□ 0.66
CHMP4A-204ENST00000530996 PRO3102Q9H379 93 aa19.19■□□□□ 0.66
CHMP4A-204ENST00000530996 IVNS1ABPQ9Y6Y0 642 aa19.19■□□□□ 0.66
CHMP4A-204ENST00000530996 A0A1W2PPC1 479 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 IFIT2P09913 472 aaKnown RBP19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 PDE6AP16499 860 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 SYN1P17600 705 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 CACNB2Q08289 660 aaPredicted RBP19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 CCL14Q16627 93 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 Q3C1V9 767 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 SLC9C2Q5TAH2 1124 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 MAP3K21Q5TCX8 1036 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 CLASRPQ8N2M8 674 aaKnown RBP19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 RHPN1Q8TCX5 695 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 C12orf42Q96LP6 360 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 MCM9Q9NXL9 1143 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 RABGAP1Q9Y3P9 1069 aa19.18■□□□□ 0.66
CHMP4A-204ENST00000530996 DDX60LQ5H9U9 1706 aaKnown RBP19.17■□□□□ 0.66
CHMP4A-204ENST00000530996 GOLIM4O00461 696 aa19.17■□□□□ 0.66
CHMP4A-204ENST00000530996 ACER1Q8TDN7 264 aa19.17■□□□□ 0.66
CHMP4A-204ENST00000530996 RIOK1Q9BRS2 568 aaKnown RBP19.17■□□□□ 0.66
CHMP4A-204ENST00000530996 KIAA1683Q9H0B3 1180 aa19.17■□□□□ 0.66
CHMP4A-204ENST00000530996 RPAP3Q9H6T3 665 aaPredicted RBP19.17■□□□□ 0.66
CHMP4A-204ENST00000530996 OGDHLQ9ULD0 1010 aa19.17■□□□□ 0.66
CHMP4A-204ENST00000530996 MYO5AQ9Y4I1 1855 aaKnown RBP19.17■□□□□ 0.66
CHMP4A-204ENST00000530996 ZBED9Q6R2W3 1325 aa19.17■□□□□ 0.66
CHMP4A-204ENST00000530996 HMMRO75330 724 aa19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 CCND3P30281 292 aaPredicted RBP19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 SHMT1P34896 483 aa19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 PLCD1P51178 756 aa19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 MAP2K5Q13163 448 aa19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 MORN1Q5T089 497 aa19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 MFSD14CQ5VZR4 134 aa19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 TANGO6Q9C0B7 1094 aa19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 ZNF532Q9HCE3 1301 aa19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 NAV1Q8NEY1 1877 aa19.16■□□□□ 0.66
CHMP4A-204ENST00000530996 MS4A1P11836 297 aa19.15■□□□□ 0.66
CHMP4A-204ENST00000530996 SEPT2Q15019 361 aa19.15■□□□□ 0.66
CHMP4A-204ENST00000530996 CATSPERGQ6ZRH7 1159 aa19.15■□□□□ 0.66
CHMP4A-204ENST00000530996 KIF1BPQ96EK5 621 aa19.15■□□□□ 0.66
CHMP4A-204ENST00000530996 PLXNB2O15031 1838 aa19.15■□□□□ 0.66
CHMP4A-204ENST00000530996 MYH1P12882 1939 aa19.15■□□□□ 0.66
CHMP4A-204ENST00000530996 DOCK3Q8IZD9 2030 aa19.14■□□□□ 0.65
CHMP4A-204ENST00000530996 SPDYE16A6NNV3 312 aaPredicted RBP19.14■□□□□ 0.65
CHMP4A-204ENST00000530996 SOX1O00570 391 aaPredicted RBP19.14■□□□□ 0.65
CHMP4A-204ENST00000530996 CNMDO75829 334 aa19.14■□□□□ 0.65
CHMP4A-204ENST00000530996 SDR42E1Q8WUS8 393 aa19.14■□□□□ 0.65
CHMP4A-204ENST00000530996 USP6NLQ92738 828 aa19.14■□□□□ 0.65
CHMP4A-204ENST00000530996 LRCH3Q96II8 777 aa19.14■□□□□ 0.65
CHMP4A-204ENST00000530996 PFASO15067 1338 aa19.14■□□□□ 0.65
CHMP4A-204ENST00000530996 CNGA1P29973 690 aa19.13■□□□□ 0.65
CHMP4A-204ENST00000530996 MNX1P50219 401 aaPredicted RBP19.13■□□□□ 0.65
CHMP4A-204ENST00000530996 DIEXFQ68CQ4 756 aaKnown RBP19.13■□□□□ 0.65
CHMP4A-204ENST00000530996 POTEEQ6S8J3 1075 aa19.13■□□□□ 0.65
CHMP4A-204ENST00000530996 SAMD1Q6SPF0 538 aaPredicted RBP19.13■□□□□ 0.65
CHMP4A-204ENST00000530996 LCORLQ8N3X6 602 aa19.13■□□□□ 0.65
CHMP4A-204ENST00000530996 EDC3Q96F86 508 aaKnown RBP19.13■□□□□ 0.65
CHMP4A-204ENST00000530996 SLC15A5A6NIM6 579 aa19.12■□□□□ 0.65
CHMP4A-204ENST00000530996 MAGEA10P43363 369 aaPredicted RBP19.12■□□□□ 0.65
CHMP4A-204ENST00000530996 ATP2B2Q01814 1243 aa19.12■□□□□ 0.65
CHMP4A-204ENST00000530996 AMOTL1Q8IY63 956 aa19.12■□□□□ 0.65
CHMP4A-204ENST00000530996 GDF15Q99988 308 aa19.12■□□□□ 0.65
CHMP4A-204ENST00000530996 ARMT1Q9H993 441 aa19.12■□□□□ 0.65
CHMP4A-204ENST00000530996 BTBD7Q9P203 1132 aa19.12■□□□□ 0.65
CHMP4A-204ENST00000530996 DDX19BQ9UMR2 479 aa19.12■□□□□ 0.65
CHMP4A-204ENST00000530996 COG6Q9Y2V7 657 aa19.12■□□□□ 0.65
CHMP4A-204ENST00000530996 MBD4O95243 580 aa19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 CYP2D6P10635 497 aa19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 PTPREP23469 700 aa19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 GUCY1A2P33402 732 aa19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 EVX2Q03828 476 aa19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 SLC44A5Q8NCS7 719 aa19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 DCP1AQ9NPI6 582 aaPredicted RBP19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 PAG1Q9NWQ8 432 aa19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 ALPK3Q96L96 1907 aa19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 SZT2Q5T011 3432 aa19.11■□□□□ 0.65
CHMP4A-204ENST00000530996 ICA1Q05084 483 aa19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 GABPAQ06546 454 aa19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 GRB14Q14449 540 aa19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 PLS1Q14651 629 aa19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 LBX2Q6XYB7 198 aa19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 TMEM179Q6ZVK1 233 aa19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 RPAP2Q8IXW5 612 aaPredicted RBP19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 UBE2OQ9C0C9 1292 aaKnown RBP19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 FLRT1Q9NZU1 646 aa19.1■□□□□ 0.65
CHMP4A-204ENST00000530996 LRRC26Q2I0M4 334 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms