RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 SH3TC2Q8TF17 1288 aa22.6■■□□□ 1.21
PCNX3-203ENST00000530174 C12orf42Q96LP6 360 aa22.6■■□□□ 1.21
PCNX3-203ENST00000530174 FSD1Q9BTV5 496 aa22.6■■□□□ 1.21
PCNX3-203ENST00000530174 KIAA1683Q9H0B3 1180 aa22.6■■□□□ 1.21
PCNX3-203ENST00000530174 KIAA0100Q14667 2235 aaKnown RBP22.59■■□□□ 1.21
PCNX3-203ENST00000530174 CENPFP49454 3210 aa22.59■■□□□ 1.21
PCNX3-203ENST00000530174 GSG1L2A8MUP6 293 aa22.59■■□□□ 1.21
PCNX3-203ENST00000530174 RAET1EQ8TD07 263 aa22.59■■□□□ 1.21
PCNX3-203ENST00000530174 P2RX7Q99572 595 aaKnown RBP22.59■■□□□ 1.21
PCNX3-203ENST00000530174 RWDD1Q9H446 243 aaPredicted RBP22.59■■□□□ 1.21
PCNX3-203ENST00000530174 ARPP21Q9UBL0 812 aaPredicted RBP22.59■■□□□ 1.21
PCNX3-203ENST00000530174 POTEFA5A3E0 1075 aa22.58■■□□□ 1.21
PCNX3-203ENST00000530174 TNPO2O14787 897 aaKnown RBP22.58■■□□□ 1.21
PCNX3-203ENST00000530174 CDK8P49336 464 aa22.58■■□□□ 1.21
PCNX3-203ENST00000530174 USP14P54578 494 aa22.58■■□□□ 1.21
PCNX3-203ENST00000530174 PDE1AP54750 535 aa22.58■■□□□ 1.21
PCNX3-203ENST00000530174 C16orf86Q6ZW13 317 aa22.58■■□□□ 1.21
PCNX3-203ENST00000530174 SMC5Q8IY18 1101 aa22.58■■□□□ 1.21
PCNX3-203ENST00000530174 STAP2Q9UGK3 403 aa22.58■■□□□ 1.21
PCNX3-203ENST00000530174 GABRQQ9UN88 632 aa22.58■■□□□ 1.21
PCNX3-203ENST00000530174 RBBP6Q7Z6E9 1792 aaKnown RBP22.58■■□□□ 1.2
PCNX3-203ENST00000530174 IGHDP01880 384 aa22.57■■□□□ 1.2
PCNX3-203ENST00000530174 AKR1B1P15121 316 aa22.57■■□□□ 1.2
PCNX3-203ENST00000530174 HERVK_113P62684 666 aa22.57■■□□□ 1.2
PCNX3-203ENST00000530174 GIMAP6Q6P9H5 292 aa22.57■■□□□ 1.2
PCNX3-203ENST00000530174 TMEM179Q6ZVK1 233 aa22.57■■□□□ 1.2
PCNX3-203ENST00000530174 LNPKQ9C0E8 428 aa22.57■■□□□ 1.2
PCNX3-203ENST00000530174 MORF4L1Q9UBU8 362 aa22.57■■□□□ 1.2
PCNX3-203ENST00000530174 MYCP01106 439 aaPredicted RBP22.56■■□□□ 1.2
PCNX3-203ENST00000530174 VCAM1P19320 739 aa22.56■■□□□ 1.2
PCNX3-203ENST00000530174 SEC62Q99442 399 aaKnown RBP22.56■■□□□ 1.2
PCNX3-203ENST00000530174 EPB41L4AQ9HCS5 686 aaPredicted RBP22.56■■□□□ 1.2
PCNX3-203ENST00000530174 A0A1W2PRG0 241 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 PEX10O60683 326 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 GNAT2P19087 354 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 GRK4P32298 578 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 FLT3LGP49771 235 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 SBK1Q52WX2 424 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 ZMYM1Q5SVZ6 1142 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 B4GALNT3Q6L9W6 998 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 CLEC10AQ8IUN9 316 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 CCDC17Q96LX7 622 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 TMEM106CQ9BVX2 250 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 TXNRD2Q9NNW7 524 aa22.55■■□□□ 1.2
PCNX3-203ENST00000530174 DOCK3Q8IZD9 2030 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 USP17L15C9J2P7 530 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 USP17L13C9JLJ4 530 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 USP17L11C9JVI0 530 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 USP17L18D6R9N7 530 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 USP17L22D6RA61 530 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 USP17L17D6RBQ6 530 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 USP17L19D6RCP7 530 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 USP17L20D6RJB6 530 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 USP17L24Q0WX57 530 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 COA7Q96BR5 231 aa22.54■■□□□ 1.2
PCNX3-203ENST00000530174 MINDY4BA8MYZ0 360 aa22.53■■□□□ 1.2
PCNX3-203ENST00000530174 TDO2P48775 406 aa22.53■■□□□ 1.2
PCNX3-203ENST00000530174 ICA1Q05084 483 aa22.53■■□□□ 1.2
PCNX3-203ENST00000530174 POTEEQ6S8J3 1075 aa22.53■■□□□ 1.2
PCNX3-203ENST00000530174 CATSPERGQ6ZRH7 1159 aa22.53■■□□□ 1.2
PCNX3-203ENST00000530174 EVI5LQ96CN4 794 aa22.53■■□□□ 1.2
PCNX3-203ENST00000530174 RBPJLQ9UBG7 517 aa22.53■■□□□ 1.2
PCNX3-203ENST00000530174 ROBO3Q96MS0 1386 aa22.52■■□□□ 1.2
PCNX3-203ENST00000530174 APPP05067 770 aa22.52■■□□□ 1.2
PCNX3-203ENST00000530174 CHD1LQ86WJ1 897 aa22.52■■□□□ 1.2
PCNX3-203ENST00000530174 SIAH1Q8IUQ4 282 aa22.52■■□□□ 1.2
PCNX3-203ENST00000530174 SLAIN1Q8ND83 568 aa22.52■■□□□ 1.2
PCNX3-203ENST00000530174 GPRC5AQ8NFJ5 357 aa22.52■■□□□ 1.2
PCNX3-203ENST00000530174 GTF3C2Q8WUA4 911 aaPredicted RBP22.52■■□□□ 1.2
PCNX3-203ENST00000530174 PAGR1Q9BTK6 254 aa22.52■■□□□ 1.2
PCNX3-203ENST00000530174 RPAP3Q9H6T3 665 aaPredicted RBP22.52■■□□□ 1.2
PCNX3-203ENST00000530174 PATL2C9JE40 543 aaKnown RBP22.51■■□□□ 1.19
PCNX3-203ENST00000530174 ADCY3O60266 1144 aa22.51■■□□□ 1.19
PCNX3-203ENST00000530174 EN2P19622 333 aaPredicted RBP22.51■■□□□ 1.19
PCNX3-203ENST00000530174 NUCB1Q02818 461 aa22.51■■□□□ 1.19
PCNX3-203ENST00000530174 IRF5Q13568 498 aa22.51■■□□□ 1.19
PCNX3-203ENST00000530174 IFNL3Q8IZI9 196 aa22.51■■□□□ 1.19
PCNX3-203ENST00000530174 STK11IPQ8N1F8 1099 aa22.51■■□□□ 1.19
PCNX3-203ENST00000530174 ARHGEF10LQ9HCE6 1279 aa22.51■■□□□ 1.19
PCNX3-203ENST00000530174 TNRC18O15417 2968 aaPredicted RBP22.51■■□□□ 1.19
PCNX3-203ENST00000530174 ERVK-9P63128 1117 aa22.5■■□□□ 1.19
PCNX3-203ENST00000530174 ERVK-24P63145 666 aa22.5■■□□□ 1.19
PCNX3-203ENST00000530174 MTFR1Q15390 333 aa22.5■■□□□ 1.19
PCNX3-203ENST00000530174 BIN2Q9UBW5 565 aaPredicted RBP22.5■■□□□ 1.19
PCNX3-203ENST00000530174 TMX2Q9Y320 296 aa22.5■■□□□ 1.19
PCNX3-203ENST00000530174 PDE4DIPQ5VU43 2346 aa22.49■■□□□ 1.19
PCNX3-203ENST00000530174 ELNP15502 786 aa22.49■■□□□ 1.19
PCNX3-203ENST00000530174 RASA1P20936 1047 aa22.49■■□□□ 1.19
PCNX3-203ENST00000530174 Q3C1V9 767 aa22.49■■□□□ 1.19
PCNX3-203ENST00000530174 KIAA1755Q5JYT7 1200 aa22.49■■□□□ 1.19
PCNX3-203ENST00000530174 CCDC129Q6ZRS4 1044 aa22.49■■□□□ 1.19
PCNX3-203ENST00000530174 NACAP1Q9BZK3 213 aa22.49■■□□□ 1.19
PCNX3-203ENST00000530174 SH2D4AQ9H788 454 aa22.49■■□□□ 1.19
PCNX3-203ENST00000530174 BRCA2P51587 3418 aa22.48■■□□□ 1.19
PCNX3-203ENST00000530174 CNMDO75829 334 aa22.48■■□□□ 1.19
PCNX3-203ENST00000530174 UBXN2AP68543 259 aa22.48■■□□□ 1.19
PCNX3-203ENST00000530174 IRX6P78412 446 aaPredicted RBP22.48■■□□□ 1.19
PCNX3-203ENST00000530174 PXYLP1Q8TE99 480 aa22.48■■□□□ 1.19
PCNX3-203ENST00000530174 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.48■■□□□ 1.19
PCNX3-203ENST00000530174 PORCNQ9H237 461 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms