RNA–Protein interactions for RNA: ENST00000530005.5

SLC43A3-217, Transcript of solute carrier family 43 member 3, humanhuman

TSL 1 (best)

Gene SLC43A3, Length 1,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-217ENST00000530005 PABPC4Q13310 644 aaKnown RBP eCLIP23.17■■□□□ 1.3
SLC43A3-217ENST00000530005 TMEM179Q6ZVK1 233 aa23.17■■□□□ 1.3
SLC43A3-217ENST00000530005 SIAH1Q8IUQ4 282 aa23.17■■□□□ 1.3
SLC43A3-217ENST00000530005 IFNL3Q8IZI9 196 aa23.17■■□□□ 1.3
SLC43A3-217ENST00000530005 SMCR8Q8TEV9 937 aaPredicted RBP23.17■■□□□ 1.3
SLC43A3-217ENST00000530005 TRIM47Q96LD4 638 aa23.17■■□□□ 1.3
SLC43A3-217ENST00000530005 CCDC17Q96LX7 622 aa23.17■■□□□ 1.3
SLC43A3-217ENST00000530005 A0A1W2PRG0 241 aa23.16■■□□□ 1.3
SLC43A3-217ENST00000530005 PDE4AP27815 886 aa23.16■■□□□ 1.3
SLC43A3-217ENST00000530005 ARHGEF6Q15052 776 aa23.16■■□□□ 1.3
SLC43A3-217ENST00000530005 CCDC129Q6ZRS4 1044 aa23.16■■□□□ 1.3
SLC43A3-217ENST00000530005 MPHOSPH10O00566 681 aaKnown RBP23.16■■□□□ 1.3
SLC43A3-217ENST00000530005 GNRH1P01148 92 aa23.16■■□□□ 1.3
SLC43A3-217ENST00000530005 PSMC4P43686 418 aa23.16■■□□□ 1.3
SLC43A3-217ENST00000530005 KIF22Q14807 665 aa23.16■■□□□ 1.3
SLC43A3-217ENST00000530005 FAM227BQ96M60 508 aa23.16■■□□□ 1.3
SLC43A3-217ENST00000530005 MGAMO43451 1857 aa23.15■■□□□ 1.3
SLC43A3-217ENST00000530005 GREB1LQ9C091 1923 aaPredicted RBP23.15■■□□□ 1.3
SLC43A3-217ENST00000530005 A0A0D9SFI3 127 aa23.15■■□□□ 1.3
SLC43A3-217ENST00000530005 OSBPP22059 807 aa23.15■■□□□ 1.3
SLC43A3-217ENST00000530005 FAM110CQ1W6H9 321 aa23.15■■□□□ 1.3
SLC43A3-217ENST00000530005 ANKRD13CQ8N6S4 541 aa23.15■■□□□ 1.3
SLC43A3-217ENST00000530005 FEZ1Q99689 392 aa23.15■■□□□ 1.3
SLC43A3-217ENST00000530005 HELLSQ9NRZ9 838 aa23.15■■□□□ 1.3
SLC43A3-217ENST00000530005 MINDY4BA8MYZ0 360 aa23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 APPP05067 770 aa23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 GCLCP48506 637 aaPredicted RBP23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 TDO2P48775 406 aa23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 USP14P54578 494 aa23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 ZYXQ15942 572 aaKnown RBP23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 POTEEQ6S8J3 1075 aa23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 CLEC10AQ8IUN9 316 aa23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 P2RX7Q99572 595 aaKnown RBP23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 PTCH2Q9Y6C5 1203 aa23.14■■□□□ 1.29
SLC43A3-217ENST00000530005 TRIM6-TRIM34B2RNG4 842 aa23.13■■□□□ 1.29
SLC43A3-217ENST00000530005 ECM2O94769 699 aaPredicted RBP23.13■■□□□ 1.29
SLC43A3-217ENST00000530005 VCAM1P19320 739 aa23.13■■□□□ 1.29
SLC43A3-217ENST00000530005 RASA1P20936 1047 aa23.13■■□□□ 1.29
SLC43A3-217ENST00000530005 RILPL2Q969X0 211 aa23.13■■□□□ 1.29
SLC43A3-217ENST00000530005 BRCA2P51587 3418 aa23.12■■□□□ 1.29
SLC43A3-217ENST00000530005 HERVK_113P62684 666 aa23.12■■□□□ 1.29
SLC43A3-217ENST00000530005 IRX3P78415 501 aaPredicted RBP23.12■■□□□ 1.29
SLC43A3-217ENST00000530005 VPS53Q5VIR6 699 aa23.12■■□□□ 1.29
SLC43A3-217ENST00000530005 ARMC5Q96C12 935 aa23.12■■□□□ 1.29
SLC43A3-217ENST00000530005 NACAP1Q9BZK3 213 aa23.12■■□□□ 1.29
SLC43A3-217ENST00000530005 SRRDQ9UH36 339 aa23.12■■□□□ 1.29
SLC43A3-217ENST00000530005 PRMT2P55345 433 aa23.11■■□□□ 1.29
SLC43A3-217ENST00000530005 ICA1Q05084 483 aa23.11■■□□□ 1.29
SLC43A3-217ENST00000530005 NMIQ13287 307 aaPredicted RBP23.11■■□□□ 1.29
SLC43A3-217ENST00000530005 MCMDC2Q4G0Z9 681 aa23.11■■□□□ 1.29
SLC43A3-217ENST00000530005 KIAA1755Q5JYT7 1200 aa23.11■■□□□ 1.29
SLC43A3-217ENST00000530005 MORF4L1Q9UBU8 362 aa23.11■■□□□ 1.29
SLC43A3-217ENST00000530005 DOCK3Q8IZD9 2030 aa23.11■■□□□ 1.29
SLC43A3-217ENST00000530005 FMNL1O95466 1100 aaPredicted RBP23.1■■□□□ 1.29
SLC43A3-217ENST00000530005 SDSP20132 328 aa23.1■■□□□ 1.29
SLC43A3-217ENST00000530005 RGS19P49795 217 aa23.1■■□□□ 1.29
SLC43A3-217ENST00000530005 FCGRTP55899 365 aa23.1■■□□□ 1.29
SLC43A3-217ENST00000530005 CATSPERGQ6ZRH7 1159 aa23.1■■□□□ 1.29
SLC43A3-217ENST00000530005 ZNF589Q86UQ0 364 aaPredicted RBP23.1■■□□□ 1.29
SLC43A3-217ENST00000530005 NAPBQ9H115 298 aa23.1■■□□□ 1.29
SLC43A3-217ENST00000530005 TXNRD2Q9NNW7 524 aa23.1■■□□□ 1.29
SLC43A3-217ENST00000530005 TMX2Q9Y320 296 aa23.1■■□□□ 1.29
SLC43A3-217ENST00000530005 USP17L15C9J2P7 530 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 USP17L13C9JLJ4 530 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 USP17L11C9JVI0 530 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 USP17L18D6R9N7 530 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 USP17L22D6RA61 530 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 USP17L17D6RBQ6 530 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 USP17L19D6RCP7 530 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 USP17L20D6RJB6 530 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 USP17L24Q0WX57 530 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 ALX1Q15699 326 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 STK11IPQ8N1F8 1099 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 KANSL2Q9H9L4 492 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 RBPJLQ9UBG7 517 aa23.09■■□□□ 1.29
SLC43A3-217ENST00000530005 PEX10O60683 326 aa23.08■■□□□ 1.29
SLC43A3-217ENST00000530005 PPARAQ07869 468 aa23.08■■□□□ 1.29
SLC43A3-217ENST00000530005 MKNK2Q9HBH9 465 aa23.08■■□□□ 1.29
SLC43A3-217ENST00000530005 IGKV6D-41A0A0C4DH26 115 aa23.08■■□□□ 1.28
SLC43A3-217ENST00000530005 EEF2P13639 858 aaKnown RBP23.08■■□□□ 1.28
SLC43A3-217ENST00000530005 GSPT1P15170 499 aaKnown RBP23.08■■□□□ 1.28
SLC43A3-217ENST00000530005 RPAP3Q9H6T3 665 aaPredicted RBP23.08■■□□□ 1.28
SLC43A3-217ENST00000530005 ARHGEF10LQ9HCE6 1279 aa23.08■■□□□ 1.28
SLC43A3-217ENST00000530005 GABRQQ9UN88 632 aa23.08■■□□□ 1.28
SLC43A3-217ENST00000530005 RLFQ13129 1914 aa23.07■■□□□ 1.28
SLC43A3-217ENST00000530005 PRDM1O75626 825 aa23.07■■□□□ 1.28
SLC43A3-217ENST00000530005 HOXD10P28358 340 aa23.07■■□□□ 1.28
SLC43A3-217ENST00000530005 SOX10P56693 466 aa23.07■■□□□ 1.28
SLC43A3-217ENST00000530005 PRKCZQ05513 592 aa23.07■■□□□ 1.28
SLC43A3-217ENST00000530005 VCPKMTQ9H867 229 aa23.07■■□□□ 1.28
SLC43A3-217ENST00000530005 MYPNQ86TC9 1320 aa23.07■■□□□ 1.28
SLC43A3-217ENST00000530005 HSPD1P10809 573 aaKnown RBP23.06■■□□□ 1.28
SLC43A3-217ENST00000530005 TTC22Q5TAA0 569 aa23.06■■□□□ 1.28
SLC43A3-217ENST00000530005 LBX2Q6XYB7 198 aa23.06■■□□□ 1.28
SLC43A3-217ENST00000530005 GTF3C2Q8WUA4 911 aaPredicted RBP23.06■■□□□ 1.28
SLC43A3-217ENST00000530005 LPAR1Q92633 364 aa23.06■■□□□ 1.28
SLC43A3-217ENST00000530005 ZNF333Q96JL9 665 aa23.06■■□□□ 1.28
SLC43A3-217ENST00000530005 ANAPC4Q9UJX5 808 aa23.06■■□□□ 1.28
SLC43A3-217ENST00000530005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms